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Results for F54F3.1

Gene ID Gene Name Reads Transcripts Annotation
F54F3.1 nid-1 2615 F54F3.1a, F54F3.1b, F54F3.1c NIDogen (basement membrane protein) [Source:RefSeq peptide;Acc:NP_001256465]

Genes with expression patterns similar to F54F3.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54F3.1 nid-1 2615 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 NIDogen (basement membrane protein) [Source:RefSeq peptide;Acc:NP_001256465]
2. T22H2.6 pgrn-1 5173 7.001 0.858 0.909 0.889 0.909 0.859 0.981 0.857 0.739 ProGRaNulin homolog [Source:RefSeq peptide;Acc:NP_492981]
3. C55B7.4 acdh-1 52311 6.865 0.867 0.929 0.853 0.929 0.871 0.960 0.646 0.810 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491871]
4. R07B1.4 gst-36 10340 6.82 0.753 0.884 0.798 0.884 0.845 0.952 0.936 0.768 Probable glutathione S-transferase gst-36 [Source:UniProtKB/Swiss-Prot;Acc:Q09607]
5. W01A11.4 lec-10 29941 6.772 0.870 0.893 0.856 0.893 0.790 0.960 0.773 0.737 Galectin [Source:RefSeq peptide;Acc:NP_504647]
6. F10G7.11 ttr-41 9814 6.704 0.860 0.865 0.841 0.865 0.804 0.953 0.795 0.721 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_001293509]
7. K03A1.5 sur-5 14762 6.279 0.883 0.807 0.926 0.807 0.689 0.955 0.633 0.579 Acetoacetyl-CoA synthetase [Source:UniProtKB/Swiss-Prot;Acc:Q21166]
8. K03A1.2 lron-7 8745 6.253 0.765 0.834 0.890 0.834 0.798 0.951 0.568 0.613 eLRR (extracellular Leucine-Rich Repeat) ONly [Source:RefSeq peptide;Acc:NP_509227]
9. F35H8.6 ugt-58 5917 6.19 0.702 0.720 0.742 0.720 0.833 0.956 0.780 0.737 Putative UDP-glucuronosyltransferase ugt-58 [Source:UniProtKB/Swiss-Prot;Acc:Q20086]
10. C10G11.5 pnk-1 4178 5.517 0.761 0.636 0.659 0.636 0.729 0.957 0.640 0.499 PaNtothenate Kinase [Source:RefSeq peptide;Acc:NP_740867]
11. F07H5.9 pho-13 1327 5.176 0.817 0.589 0.854 0.589 0.730 0.952 - 0.645 intestinal acid PHOsphatase [Source:RefSeq peptide;Acc:NP_495875]
12. C23H5.1 prmt-6 1087 5.014 0.810 - 0.847 - 0.784 0.951 0.808 0.814 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_500168]
13. 6R55.2 6R55.2 0 4.79 0.780 - 0.820 - 0.868 0.951 0.646 0.725
14. F42C5.10 ifo-1 2068 4.756 0.833 0.544 0.585 0.544 0.513 0.950 0.787 - Intermediate Filament Organize [Source:RefSeq peptide;Acc:NP_501170]
15. K06G5.3 K06G5.3 0 4.754 0.806 - 0.878 - 0.778 0.957 0.731 0.604
16. T12G3.4 T12G3.4 1451 4.65 0.719 0.281 0.631 0.281 0.923 0.965 0.850 -
17. F18E9.1 F18E9.1 0 4.348 0.698 - 0.851 - 0.668 0.953 0.463 0.715
18. C35A5.4 C35A5.4 456 4.303 0.606 - 0.716 - 0.732 0.955 0.650 0.644 Major sperm protein [Source:RefSeq peptide;Acc:NP_505693]
19. B0454.6 B0454.6 139 4.194 0.675 - 0.744 - 0.547 0.963 0.578 0.687
20. B0285.t1 B0285.t1 0 4.03 0.707 - 0.724 - 0.672 0.952 0.413 0.562
21. F36H9.5 F36H9.5 0 3.962 0.684 - - - 0.746 0.951 0.837 0.744
22. F45D11.16 F45D11.16 5502 3.393 - - - - 0.751 0.885 0.954 0.803
23. F10D2.9 fat-7 2772 3.381 - - 0.163 - 0.787 0.954 0.813 0.664 Delta(9)-fatty-acid desaturase fat-7 [Source:UniProtKB/Swiss-Prot;Acc:G5EGH6]
24. F45D11.15 F45D11.15 5246 3.33 - - - - 0.721 0.876 0.955 0.778
25. C54D1.6 bar-1 841 3.329 0.461 0.659 - 0.659 0.598 0.952 - - Beta-catenin/armadillo-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18825]
26. DH11.1 glna-2 878 3.305 - - 0.658 - 0.661 0.970 0.428 0.588 Putative glutaminase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q19013]
27. K11G12.1 nas-11 1715 3.199 - - - - 0.749 0.955 0.724 0.771 Zinc metalloproteinase nas-11 [Source:UniProtKB/Swiss-Prot;Acc:Q21432]
28. R01H10.5 rip-1 0 2.896 - - - - 0.721 0.954 0.535 0.686 RFS-1 Interacting Partner [Source:RefSeq peptide;Acc:NP_499271]
29. F56F10.1 F56F10.1 5122 1.922 - 0.961 - 0.961 - - - - Putative serine protease F56F10.1 [Source:UniProtKB/Swiss-Prot;Acc:P90893]
30. C54D2.1 C54D2.1 0 1.51 - - - - 0.544 0.966 - -
31. K06B4.12 twk-34 0 0.954 - - - - - 0.954 - - TWiK family of potassium channels [Source:RefSeq peptide;Acc:NP_506906]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA