C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male3, section s11.

Sample reads: 11,159. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F02A9.3 far-2 112.00 10036.95 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
2. F11H8.3 col-8 105.00 9409.64 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
3. H05L03.3 H05L03.3 97.20 8710.64
4. T27E4.4 fip-2 94.30 8450.75 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
5. K08D12.6 K08D12.6 87.20 7814.48
6. T27E9.1 ant-1.1 81.60 7312.63 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
7. W06H8.8 ttn-1 80.20 7187.17 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
8. Y82E9BR.3 Y82E9BR.3 78.90 7070.67 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
9. C49G7.3 C49G7.3 72.20 6470.25
10. T20G5.7 dod-6 72.20 6470.25 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
11. C34E10.6 atp-2 70.80 6344.79 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
12. F11G11.11 col-20 70.80 6344.79 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
13. F07A5.7 unc-15 68.20 6111.78 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
14. C33G8.2 C33G8.2 64.40 5771.25
15. F11C3.3 unc-54 63.10 5654.75 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
16. K02G10.4 flp-11 61.80 5538.24 FMRFamide-like neuropeptides 11 AMRNALVRF-amide ASGGMRNALVRF-amide SPLDEEDFAPESPLQ-amide NGAPQPFVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q21156]
17. C34F6.2 col-178 60.50 5421.74 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
18. F26F12.1 col-140 60.50 5421.74 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
19. T04C12.4 act-3 60.50 5421.74 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
20. T05A1.2 col-122 59.30 5314.21 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
21. F23B2.5 flp-1 51.80 4642.09 FMRFamide-like neuropeptides 1 PNFMRY-amide AGSDPNFLRF-amide SQPNFLRF-amide ASGDPNFLRF-amide SDPNFLRF-amide AAADPNFLRF-amide SADPNFLRF-amide PNFLRF-amide [Source:UniProtKB/Swiss-Prot;Acc:P41855]
22. F28H1.2 cpn-3 50.60 4534.55 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
23. Y105E8B.1 lev-11 50.60 4534.55 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
24. H28O16.1 H28O16.1 49.40 4427.01 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
25. F54C1.7 pat-10 48.20 4319.47 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
26. M03F4.2 act-4 48.20 4319.47 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
27. ZK721.2 unc-27 48.20 4319.47 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
28. C34F6.3 col-179 45.80 4104.40 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
29. W03G11.1 col-181 45.80 4104.40 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
30. T04C12.6 act-1 44.60 3996.86 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
31. C06A8.3 C06A8.3 43.40 3889.32
32. F09F7.2 mlc-3 42.20 3781.78 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
33. F15A4.6 F15A4.6 41.00 3674.24
34. F52H3.7 lec-2 41.00 3674.24 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
35. Y77E11A.15 col-106 41.00 3674.24 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
36. C24F3.6 col-124 37.60 3369.55 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
37. F46H5.3 F46H5.3 37.60 3369.55 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
38. C51E3.7 egl-3 36.40 3262.01 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
39. C53B4.5 col-119 36.40 3262.01 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
40. F01G12.5 let-2 36.40 3262.01 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
41. B0213.2 nlp-27 35.30 3163.43 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
42. C14B9.1 hsp-12.2 35.30 3163.43 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
43. C36E6.3 mlc-1 35.30 3163.43 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
44. C14F5.3 tnt-3 34.10 3055.89 TropoNin T [Source:RefSeq peptide;Acc:NP_509337]
45. C36E6.5 mlc-2 34.10 3055.89 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
46. F41G3.10 F41G3.10 33.00 2957.32
47. F57B1.4 col-160 31.80 2849.78 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
48. F02A9.2 far-1 30.70 2751.20 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
49. F15A2.1 col-184 30.70 2751.20 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
50. K02F2.2 ahcy-1 30.70 2751.20 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
51. T21H3.3 cmd-1 30.70 2751.20 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
52. T25F10.6 clik-1 29.60 2652.62 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
53. T27C4.1 T27C4.1 29.60 2652.62
54. F33A8.2 nlp-18 28.50 2554.04 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_496365]
55. F53A9.10 tnt-2 28.50 2554.04 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
56. K12G11.3 sodh-1 28.50 2554.04 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
57. R06C7.10 myo-1 28.50 2554.04 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
58. T05A8.3 T05A8.3 28.50 2554.04
59. F08B6.4 unc-87 27.40 2455.47 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
60. K10B3.9 mai-1 27.40 2455.47 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
61. RIT6P.22 27.40 2455.47
62. T15B7.3 col-143 27.40 2455.47 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
63. Y59A8B.23 gck-3 27.40 2455.47 Germinal center kinase 3 [Source:UniProtKB/Swiss-Prot;Acc:G5EEN4]
64. Y67H2A.5 Y67H2A.5 27.40 2455.47
65. C09D1.1 unc-89 26.30 2356.89 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
66. T03D8.3 sbt-1 26.30 2356.89 Seven B Two (mammalian 7BT prohormone convertase chaperone) homolog [Source:RefSeq peptide;Acc:NP_508020]
67. W03F8.1 tni-4 25.20 2258.31 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
68. C49F5.1 sams-1 24.00 2150.77 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
69. E03D2.1 nlp-13 24.00 2150.77 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504170]
70. E04A4.7 cyc-2.1 24.00 2150.77 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
71. F01D4.4 egl-21 24.00 2150.77
72. F20A1.1 F20A1.1 24.00 2150.77
73. F25H2.5 ndk-1 24.00 2150.77 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
74. F49E2.5 F49E2.5 24.00 2150.77
75. R05G6.7 vdac-1 24.00 2150.77 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
76. T22B11.4 T22B11.4 24.00 2150.77
77. W09C5.8 W09C5.8 24.00 2150.77
78. Y5F2A.1 ttr-16 23.00 2061.16 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
79. C44B12.2 ost-1 21.90 1962.58 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
80. RIT6P.424 21.90 1962.58
81. T27E4.8 hsp-16.1 21.90 1962.58 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
82. ZK973.6 anc-1 21.90 1962.58 Nuclear anchorage protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4M4]
83. C42C1.14 rpl-34 19.70 1765.43 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
84. F20H11.3 mdh-2 19.70 1765.43 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
85. F21F3.6 F21F3.6 19.70 1765.43
86. F54E7.2 rps-12 19.70 1765.43 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
87. T19C4.7 nlp-33 19.70 1765.43 Neuropeptide-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZN4]
88. Y105C5B.5 Y105C5B.5 19.70 1765.43
89. Y69A2AR.18 Y69A2AR.18 19.70 1765.43
90. F01G4.6 F01G4.6 18.60 1666.85 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
91. F31E3.5 eef-1A.1 18.60 1666.85 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
92. K02F2.5 K02F2.5 18.60 1666.85
93. K11D9.2 sca-1 18.60 1666.85 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
94. C27B7.9 C27B7.9 17.60 1577.23
95. F14F7.1 col-98 17.60 1577.23 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
96. F33A8.3 cey-1 17.60 1577.23 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
97. W03G11.1b 17.60 1577.23
98. Y11D7A.3 Y11D7A.3 17.60 1577.23
99. B0041.4 rpl-4 16.50 1478.66 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
100. C23H4.1 cab-1 16.50 1478.66
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA