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Experiment herm4, section s7.

Sample reads: 25,669. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.6 act-1 594.00 23140.86 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. T04C12.4 act-3 444.00 17297.21 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. F09F7.2 mlc-3 439.00 17102.42 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
4. M03F4.2 act-4 379.00 14764.96 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
5. T27E9.1 ant-1.1 346.00 13479.36 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
6. C36E6.3 mlc-1 321.00 12505.42 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
7. F11C3.3 unc-54 321.00 12505.42 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
8. F02A9.3 far-2 307.00 11960.01 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
9. F07A5.7 unc-15 297.00 11570.43 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
10. Y82E9BR.3 Y82E9BR.3 225.00 8765.48 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
11. W03F8.1 tni-4 207.00 8064.24 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
12. Y105E8B.1 lev-11 202.00 7869.45 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
13. C14B9.1 hsp-12.2 191.00 7440.92 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
14. K08D12.6 K08D12.6 187.00 7285.09
15. R06C7.10 myo-1 187.00 7285.09 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
16. T18D3.4 myo-2 177.00 6895.51 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
17. F46H5.3 F46H5.3 167.00 6505.93 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
18. C18A11.7 dim-1 156.00 6077.40 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
19. W06H8.8 ttn-1 156.00 6077.40 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
20. C06A8.3 C06A8.3 152.00 5921.57
21. T25F10.6 clik-1 149.00 5804.69 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
22. C34E10.6 atp-2 147.00 5726.78 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
23. F52H3.7 lec-2 145.00 5648.86 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
24. C53C9.2 C53C9.2 142.00 5531.99
25. Y73B6BL.24 acp-6 137.00 5337.20 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
26. F54C1.7 pat-10 135.00 5259.29 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
27. F27C1.7 atp-3 128.00 4986.58 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
28. T04C12.5 act-2 122.00 4752.84 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
29. Y69A2AR.18 Y69A2AR.18 120.00 4674.92
30. F01G4.6 F01G4.6 118.00 4597.01 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
31. T20B3.2 tni-3 111.00 4324.30 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
32. R05G6.7 vdac-1 109.00 4246.39 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
33. F08B6.4 unc-87 103.00 4012.64 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
34. ZC15.8 pqn-94 102.00 3973.68 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
35. F28H1.2 cpn-3 98.60 3841.23 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
36. K10B3.9 mai-1 98.60 3841.23 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
37. F01G12.5 let-2 97.20 3786.69 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
38. T20G5.2 cts-1 97.20 3786.69 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
39. F11E6.3 F11E6.3 94.30 3673.71
40. F13D12.4 alh-8 94.30 3673.71 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
41. F20H11.3 mdh-2 92.80 3615.27 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
42. T05D4.1 aldo-1 91.40 3560.73 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
43. F53A9.10 tnt-2 88.60 3451.65 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
44. H28O16.1 H28O16.1 88.60 3451.65 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
45. C44B12.2 ost-1 81.60 3178.95 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
46. T08B1.2 tnt-4 80.20 3124.41 TropoNin T [Source:RefSeq peptide;Acc:NP_001263832]
47. F42G8.12 isp-1 73.50 2863.39 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
48. F25H2.5 ndk-1 72.20 2812.74 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
49. F52D10.3 ftt-2 72.20 2812.74 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
50. ZK829.4 gdh-1 72.20 2812.74 Glutamate dehydrogenase [Source:RefSeq peptide;Acc:NP_502267]
51. T05A1.2 col-122 70.80 2758.20 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
52. F10C1.2 ifb-1 68.20 2656.91 Intermediate filament protein ifb-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19289]
53. Y67H2A.5 Y67H2A.5 68.20 2656.91
54. F33A8.3 cey-1 66.90 2606.27 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
55. F22E10.3 pgp-14 65.60 2555.62 P-GlycoProtein related [Source:RefSeq peptide;Acc:NP_510128]
56. C10G8.5 ncx-2 63.10 2458.23 Na/Ca eXchangers [Source:RefSeq peptide;Acc:NP_504414]
57. E04A4.7 cyc-2.1 63.10 2458.23 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
58. F26E4.6 F26E4.6 60.50 2356.94
59. C36E6.5 mlc-2 59.30 2310.19 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
60. C24F3.6 col-124 58.00 2259.55 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
61. F02A9.2 far-1 58.00 2259.55 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
62. T21B10.2 enol-1 58.00 2259.55 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
63. F25H5.3 pyk-1 55.50 2162.15 Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
64. T28D6.3 T28D6.3 55.50 2162.15
65. W09C5.8 W09C5.8 55.50 2162.15
66. F32A5.4 F32A5.4 51.80 2018.01
67. F56B6.4 gyg-1 51.80 2018.01 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
68. T23E7.2 T23E7.2 51.80 2018.01
69. C24A3.2 C24A3.2 50.60 1971.26
70. K12G11.3 sodh-1 50.60 1971.26 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
71. M18.1 col-129 50.60 1971.26 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
72. C09B8.6 hsp-25 49.40 1924.51 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001024374]
73. F47B7.1 F47B7.1 49.40 1924.51 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
74. ZC449.5 ZC449.5 49.40 1924.51
75. C34F6.2 col-178 48.20 1877.76 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
76. K11D9.2 sca-1 48.20 1877.76 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
77. ZC101.2 unc-52 48.20 1877.76 Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]
78. F47B7.7 F47B7.7 47.00 1831.01
79. F49D11.8 cpn-4 47.00 1831.01 CalPoNin [Source:RefSeq peptide;Acc:NP_492849]
80. R02F11.4 R02F11.4 47.00 1831.01
81. F42G4.3 zyx-1 45.80 1784.26 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
82. R11G11.7 pqn-60 45.80 1784.26 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_503225]
83. ZC477.9 deb-1 45.80 1784.26 Vinculin [Source:UniProtKB/Swiss-Prot;Acc:P19826]
84. F49E2.5 F49E2.5 44.60 1737.51
85. R53.4 R53.4 43.40 1690.76 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
86. Y37D8A.14 cco-2 43.40 1690.76 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
87. W05G11.6 pck-1 42.20 1644.01 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_497134]
88. F11H8.3 col-8 41.00 1597.26 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
89. F26F12.1 col-140 41.00 1597.26 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
90. T07C12.9 anmt-3 41.00 1597.26 Amine N-MethylTransferase [Source:RefSeq peptide;Acc:NP_505563]
91. F29B9.11 F29B9.11 39.90 1554.41
92. F56D2.1 ucr-1 39.90 1554.41 Cytochrome b-c1 complex subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P98080]
93. T07C4.5 ttr-15 39.90 1554.41 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
94. T22B11.5 ogdh-1 39.90 1554.41 2-oxoglutarate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O61199]
95. ZK973.6 anc-1 39.90 1554.41 Nuclear anchorage protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4M4]
96. C09D1.1 unc-89 38.70 1507.66 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
97. C54G4.8 cyc-1 38.70 1507.66 CYtochrome C [Source:RefSeq peptide;Acc:NP_492207]
98. F38B2.4 F38B2.4 38.70 1507.66 Adenylate kinase isoenzyme 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20140]
99. LLC1.3 dld-1 38.70 1507.66 Dihydrolipoyl dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O17953]
100. F58G4.1 myo-5 37.60 1464.81 MYOsin heavy chain structural genes [Source:RefSeq peptide;Acc:NP_505094]
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA