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Experiment herm3, section s1.

Sample reads: 97. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F23C8.4 ubxn-1 2.00 20618.56 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_490978]
2. F55H2.6 clu-1 2.00 20618.56 Clustered mitochondria protein homolog [Source:UniProtKB/Swiss-Prot;Acc:P34466]
3. T05F1.3 rps-19 2.00 20618.56 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
4. W07G4.4 lap-2 2.00 20618.56 Putative aminopeptidase W07G4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q27245]
5. Y22D7AL.5 hsp-60 2.00 20618.56 Chaperonin homolog Hsp-60, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P50140]
6. Y59E9AL.7 nbet-1 2.00 20618.56 Nematode homolog of yeast BET1 (Blocked Early in Transport) [Source:RefSeq peptide;Acc:NP_001023538]
7. Y69A2AR.18 Y69A2AR.18 2.00 20618.56
8. B0035.13 B0035.13 1.00 10309.28
9. B0261.4 mrpl-47 1.00 10309.28 Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_001040632]
10. B0464.5 spk-1 1.00 10309.28 Serine/threonine-protein kinase spk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q03563]
11. C02F5.6 henn-1 1.00 10309.28 HEN1 (RNA 3'end methyltransferase) of Nematode [Source:RefSeq peptide;Acc:NP_741251]
12. C05C10.3 C05C10.3 1.00 10309.28 Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09450]
13. C10G8.5 ncx-2 1.00 10309.28 Na/Ca eXchangers [Source:RefSeq peptide;Acc:NP_504414]
14. C12C8.3 lin-41 1.00 10309.28
15. C17E4.6 C17E4.6 1.00 10309.28
16. C26D10.1 ran-3 1.00 10309.28 Regulator of chromosome condensation [Source:UniProtKB/Swiss-Prot;Acc:Q18211]
17. C42D8.2 vit-2 1.00 10309.28 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
18. C44B12.1 perm-2 1.00 10309.28 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500042]
19. C47B2.5 eif-6 1.00 10309.28 Eukaryotic translation initiation factor 6 [Source:UniProtKB/Swiss-Prot;Acc:O62106]
20. C47E12.5 uba-1 1.00 10309.28 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
21. D2030.8 D2030.8 1.00 10309.28
22. F02A9.3 far-2 1.00 10309.28 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
23. F07F6.4 F07F6.4 1.00 10309.28
24. F08F8.8 gos-28 1.00 10309.28 Golgi SNAP receptor complex member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZW1]
25. F11C3.3 unc-54 1.00 10309.28 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
26. F13G3.4 dylt-1 1.00 10309.28 DYnein Light chain (Tctex type) [Source:RefSeq peptide;Acc:NP_492063]
27. F15B9.4 inft-2 1.00 10309.28 INverted Formin/formin Three-related [Source:RefSeq peptide;Acc:NP_506253]
28. F25D7.2 tag-353 1.00 10309.28
29. F28D1.7 rps-23 1.00 10309.28 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
30. F29B9.11 F29B9.11 1.00 10309.28
31. F36A2.6 rps-15 1.00 10309.28 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
32. F37C12.1 F37C12.1 1.00 10309.28
33. F37C12.4 rpl-36 1.00 10309.28 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
34. F40F8.10 rps-9 1.00 10309.28 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
35. F41H10.8 elo-6 1.00 10309.28 Elongation of very long chain fatty acids protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q20303]
36. F45H10.3 F45H10.3 1.00 10309.28
37. F46B6.7 ztf-7 1.00 10309.28 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_505526]
38. F46E10.10 mdh-1 1.00 10309.28 Malate dehydrogenase [Source:RefSeq peptide;Acc:NP_504656]
39. F52A8.1 F52A8.1 1.00 10309.28
40. F53A3.3 rps-22 1.00 10309.28 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
41. F54E7.2 rps-12 1.00 10309.28 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
42. F55A4.1 sec-22 1.00 10309.28 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_508198]
43. F56C9.3 F56C9.3 1.00 10309.28
44. K07G5.1 crml-1 1.00 10309.28 CARMIL (Capping, ARp2/3, Myosin I Linker protein) homolog [Source:RefSeq peptide;Acc:NP_492024]
45. K08D12.3 K08D12.3 1.00 10309.28
46. K09B11.10 mam-3 1.00 10309.28 MAM (Meprin, A5-protein, PTPmu) domain protein [Source:RefSeq peptide;Acc:NP_502592]
47. K10B2.5 ani-2 1.00 10309.28 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
48. K10C2.4 fah-1 1.00 10309.28 FumarylAcetoacetate Hydrolase [Source:RefSeq peptide;Acc:NP_509083]
49. K11D9.1 klp-7 1.00 10309.28 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001022677]
50. M01E11.4 pqn-52 1.00 10309.28 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491629]
51. M28.5 M28.5 1.00 10309.28 NHP2-like protein 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q21568]
52. R05F9.1 btbd-10 1.00 10309.28 BTB/POZ Domain-containing protein homolog [Source:RefSeq peptide;Acc:NP_740982]
53. R05G6.7 vdac-1 1.00 10309.28 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
54. R08C7.3 htz-1 1.00 10309.28 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
55. R10E11.8 vha-1 1.00 10309.28 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
56. R11A5.2 nud-2 1.00 10309.28 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_492172]
57. RIT5P.269 1.00 10309.28
58. T01A4.2 1.00 10309.28
59. T04C12.4 act-3 1.00 10309.28 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
60. T04G9.5 trap-2 1.00 10309.28 Translocon-associated protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q22169]
61. T05B9.1 T05B9.1 1.00 10309.28
62. T05H10.1 T05H10.1 1.00 10309.28 Ubiquitin carboxyl-terminal hydrolase [Source:RefSeq peptide;Acc:NP_495686]
63. T06E6.2 cyb-3 1.00 10309.28 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
64. T07A9.14 T07A9.14 1.00 10309.28
65. T07A9.9 nog-1 1.00 10309.28 Nucleolar GTP-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O44411]
66. T08A11.1 T08A11.1 1.00 10309.28
67. T08B2.9 fars-1 1.00 10309.28 Phenylalanyl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_491792]
68. T21B10.2 enol-1 1.00 10309.28 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
69. T22F3.3 T22F3.3 1.00 10309.28 Alpha-1,4 glucan phosphorylase [Source:RefSeq peptide;Acc:NP_504007]
70. T26A5.2 T26A5.2 1.00 10309.28
71. T27E9.7 abcf-2 1.00 10309.28 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
72. W05F2.3 W05F2.3 1.00 10309.28
73. W09C5.6 rpl-31 1.00 10309.28 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
74. Y106G6H.2 pab-1 1.00 10309.28 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
75. Y24D9A.1 ell-1 1.00 10309.28 ELL transcription elongation factor homolog [Source:RefSeq peptide;Acc:NP_741374]
76. Y38C1AA.12 Y38C1AA.12 1.00 10309.28
77. Y48B6A.12 men-1 1.00 10309.28 Malic enzyme [Source:RefSeq peptide;Acc:NP_496968]
78. Y51H1A.1 1.00 10309.28
79. Y56A3A.32 wah-1 1.00 10309.28 Worm AIF (apoptosis inducing factor) Homolog [Source:RefSeq peptide;Acc:NP_499564]
80. Y61A9LA.1 Y61A9LA.1 1.00 10309.28
81. Y62H9A.5 Y62H9A.5 1.00 10309.28
82. Y65B4BR.5 icd-2 1.00 10309.28 Nascent polypeptide-associated complex subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:Q86S66]
83. Y69A2AR.2 ric-8 1.00 10309.28 Synembryn [Source:UniProtKB/Swiss-Prot;Acc:Q9GSX9]
84. Y87G2A.8 gpi-1 1.00 10309.28 Glucose-6-phosphate isomerase [Source:RefSeq peptide;Acc:NP_001021838]
85. ZC155.3 morc-1 1.00 10309.28 MORC (mouse microrchidia) family CW-type zinc finger protein [Source:RefSeq peptide;Acc:NP_498104]
86. ZC168.4 cyb-1 1.00 10309.28 G2/mitotic-specific cyclin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q10653]
87. ZC513.6 oma-2 1.00 10309.28
88. ZK795.3 ZK795.3 1.00 10309.28 Brix domain-containing protein ZK795.3 [Source:UniProtKB/Swiss-Prot;Acc:O62518]
89. ZK858.1 gld-4 1.00 10309.28 Poly(A) RNA polymerase gld-4 [Source:UniProtKB/Swiss-Prot;Acc:G5EFL0]
90. ZK973.2 cec-10 1.00 10309.28 C.Elegans Chromodomain protein [Source:RefSeq peptide;Acc:NP_491360]
91. AC3.5 AC3.5 0.00 0.00 Aminopeptidase-like protein AC3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q17405]
92. AC7.2 soc-2 0.00 0.00 Leucine-rich repeat protein soc-2 [Source:UniProtKB/Swiss-Prot;Acc:Q22875]
93. AH10.1 acs-10 0.00 0.00 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_506502]
94. AH6.2 sfxn-1.1 0.00 0.00 Putative sideroflexin-1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09201]
95. AH6.3 AH6.3 0.00 0.00
96. AH6.5 mex-6 0.00 0.00 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
97. AH9.2 crn-4 0.00 0.00 Cell death-related nuclease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q10905]
98. AH9.3 AH9.3 0.00 0.00
99. B0001.1 lin-24 0.00 0.00
100. B0001.2 B0001.2 0.00 0.00
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA