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Experiment herm3, region R3.

Sample reads: 206,103. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T20G5.7 dod-6 1794.62 8707.37 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
2. T04C12.6 act-1 1762.85 8553.26 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. T04C12.4 act-3 1561.69 7577.21 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. K08D12.6 K08D12.6 1494.63 7251.86
5. M03F4.2 act-4 1457.57 7072.06 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
6. F02A9.3 far-2 1450.52 7037.81 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
7. F11C3.3 unc-54 1411.69 6849.45 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
8. T27E9.1 ant-1.1 1323.46 6421.36 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
9. F07A5.7 unc-15 1228.17 5959.03 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
10. F09F7.2 mlc-3 1199.94 5822.04 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
11. H05L03.3 H05L03.3 1148.59 5572.89
12. C36E6.3 mlc-1 1132.89 5496.69 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
13. F42F12.7 nspc-14 1129.36 5479.56 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872249]
14. Y82E9BR.3 Y82E9BR.3 1069.36 5188.46 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
15. F52H3.7 lec-2 1021.71 4957.29 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
16. F42F12.9 nspc-10 986.44 4786.14 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_872250]
17. RIT6P.22 947.60 4597.70
18. F42F12.10 nspc-12 903.52 4383.82 Nematode Specific Peptide family, group C [Source:UniProtKB/TrEMBL;Acc:G5EC48]
19. F28H1.2 cpn-3 845.25 4101.11 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
20. T27E4.4 fip-2 828.84 4021.49 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
21. M18.1 col-129 789.14 3828.84 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
22. Y105E8B.1 lev-11 774.67 3758.64 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
23. K10B3.9 mai-1 767.61 3724.39 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
24. C18A11.7 dim-1 765.84 3715.83 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
25. F42F12.8 nspc-15 764.15 3707.61 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510074]
26. C03G5.11 nspc-4 719.96 3493.22 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024348]
27. F01G12.5 let-2 714.67 3467.54 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
28. T25F10.6 clik-1 688.20 3339.11 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
29. C49F5.1 sams-1 676.20 3280.89 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
30. C14B9.1 hsp-12.2 662.08 3212.39 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
31. T18D3.4 myo-2 660.85 3206.40 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
32. F57B1.4 col-160 650.79 3157.60 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
33. F42F12.1 nspc-9 649.38 3150.75 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510070]
34. W06H8.8 ttn-1 644.09 3125.06 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
35. F11E6.3 F11E6.3 640.91 3109.65
36. D1025.4 nspc-20 640.56 3107.94 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510417]
37. C03G5.2 nspc-7 637.04 3090.90 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_741862]
38. F46H5.3 F46H5.3 631.73 3065.13 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
39. F25H2.5 ndk-1 625.91 3036.88 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
40. K02F2.2 ahcy-1 625.56 3035.16 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
41. C03G5.8 nspc-1 619.38 3005.20 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024352]
42. C34E10.6 atp-2 617.62 2996.64 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
43. F54C1.7 pat-10 610.56 2962.39 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
44. R06C7.10 myo-1 605.97 2940.13 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
45. C06A8.3 C06A8.3 583.21 2829.68
46. W03F8.1 tni-4 581.44 2821.12 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
47. F13D12.4 alh-8 565.03 2741.49 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
48. F31E3.5 eef-1A.1 558.33 2708.96 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
49. F11G11.11 col-20 548.80 2662.73 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
50. R05G6.7 vdac-1 547.03 2654.16 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
51. C44B12.2 ost-1 541.74 2628.48 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
52. R10E11.8 vha-1 537.86 2609.64 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
53. T05A1.2 col-122 532.21 2582.24 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
54. C24F3.6 col-124 526.21 2553.13 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
55. E04A4.7 cyc-2.1 516.33 2505.19 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
56. F26F12.1 col-140 513.15 2489.78 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
57. T20G5.2 cts-1 509.97 2474.37 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
58. F01G4.6 F01G4.6 506.45 2457.24 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
59. ZC15.8 pqn-94 499.39 2422.99 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
60. ZK721.2 unc-27 495.86 2405.87 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
61. F54E7.2 rps-12 484.92 2352.79 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
62. F13B10.2 rpl-3 481.39 2335.66 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
63. F42F12.6 nspc-13 478.21 2320.25 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_510073]
64. F42C5.8 rps-8 476.98 2314.26 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
65. F52D10.3 ftt-2 465.86 2260.32 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
66. C03G5.10 nspc-3 457.04 2217.51 Nematode Specific Peptide family, group C [Source:RefSeq peptide;Acc:NP_001024347]
67. Y69A2AR.18 Y69A2AR.18 457.04 2217.51
68. T04C12.5 act-2 453.51 2200.39 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
69. F53A9.10 tnt-2 444.68 2157.58 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
70. C54D10.3 C54D10.3 443.03 2149.53
71. F01D4.4 egl-21 437.63 2123.33
72. F08B6.4 unc-87 435.86 2114.77 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
73. F38A3.1 col-81 435.68 2113.91 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
74. H06O01.1 pdi-3 425.63 2065.11
75. W03G11.1 col-181 419.98 2037.71 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
76. F11H8.3 col-8 418.57 2030.86 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
77. RIT1P.688 414.69 2012.03
78. C04F12.4 rpl-14 406.92 1974.35 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
79. T22E5.5 mup-2 405.86 1969.22 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
80. F33A8.3 cey-1 399.51 1938.40 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
81. F27C1.7 atp-3 395.63 1919.56 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
82. C34F6.2 col-178 394.57 1914.42 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
83. F56B6.4 gyg-1 391.75 1900.72 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
84. C51E3.7 egl-3 388.22 1883.60 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
85. F41F3.4 col-139 383.28 1859.63 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
86. K12G11.3 sodh-1 381.69 1851.92 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
87. F49E2.5 F49E2.5 377.63 1832.23
88. ZK1193.1 col-19 372.86 1809.11 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
89. F20H11.3 mdh-2 367.04 1780.86 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
90. Y77E11A.15 col-106 363.86 1765.45 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
91. F40F11.1 rps-11 360.51 1749.18 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
92. F55D10.2 rpl-25.1 359.63 1744.90 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
93. Y5F2A.1 ttr-16 359.63 1744.90 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
94. Y105E8A.16 rps-20 355.75 1726.06 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
95. T07C4.5 ttr-15 353.28 1714.08 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
96. Y24D9A.4 rpl-7A 352.92 1712.36 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
97. C36E6.5 mlc-2 346.57 1681.54 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
98. Y71F9AL.13 rpl-1 346.39 1680.68 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
99. Y67H2A.5 Y67H2A.5 344.45 1671.27
100. W05B2.5 col-93 339.87 1649.01 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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