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Experiment herm3, region R2.

Sample reads: 154,508. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K08D12.6 K08D12.6 5679.78 36760.35
2. T04C12.6 act-1 1538.75 9959.00 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. F11C3.3 unc-54 1409.93 9125.27 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
4. F52H3.7 lec-2 1337.58 8657.02 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
5. T04C12.4 act-3 1245.82 8063.13 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
6. F09F7.2 mlc-3 1177.00 7617.72 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
7. T27E9.1 ant-1.1 1171.71 7583.46 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
8. M03F4.2 act-4 1112.42 7199.72 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
9. F07A5.7 unc-15 1051.71 6806.84 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
10. Y82E9BR.3 Y82E9BR.3 1046.42 6772.58 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
11. M18.1 col-129 989.25 6402.54 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
12. F02A9.3 far-2 944.07 6110.16 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
13. C36E6.3 mlc-1 910.54 5893.17 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
14. T05A1.2 col-122 830.78 5376.94 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
15. F11E6.3 F11E6.3 801.49 5187.36
16. K10B3.9 mai-1 793.73 5137.11 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
17. F57B1.4 col-160 787.02 5093.71 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
18. C18A11.7 dim-1 782.78 5066.30 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
19. C06A8.3 C06A8.3 759.32 4914.40
20. C34E10.6 atp-2 711.14 4602.61 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
21. F11G11.11 col-20 708.85 4587.76 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
22. C24F3.6 col-124 701.61 4540.94 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
23. T25F10.6 clik-1 697.73 4515.81 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
24. Y105E8B.1 lev-11 687.50 4449.57 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
25. F11H8.3 col-8 664.03 4297.67 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
26. F46H5.3 F46H5.3 656.79 4250.85 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
27. F54C1.7 pat-10 608.44 3937.92 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
28. C34F6.2 col-178 595.21 3852.26 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
29. F01G12.5 let-2 595.03 3851.12 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
30. F26F12.1 col-140 579.50 3750.61 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
31. F28H1.2 cpn-3 569.97 3688.94 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
32. R05G6.7 vdac-1 565.91 3662.67 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
33. K02F2.2 ahcy-1 552.57 3576.33 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
34. Y77E11A.15 col-106 537.68 3479.94 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
35. R10E11.8 vha-1 527.62 3414.84 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
36. C44B12.2 ost-1 523.74 3389.71 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
37. F41F3.4 col-139 516.50 3342.89 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
38. R06C7.10 myo-1 512.80 3318.90 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
39. Y69A2AR.18 Y69A2AR.18 510.68 3305.20
40. T18D3.4 myo-2 510.33 3302.92 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
41. W03G11.1 col-181 501.86 3248.09 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
42. Y73B6BL.24 acp-6 499.39 3232.11 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
43. RIT6P.22 495.86 3209.26
44. C24A1.1 flp-24 488.45 3161.30 FMRFamide-like neuropeptides 24 VPSAGDMMVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:O17058]
45. F01G4.6 F01G4.6 470.27 3043.66 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
46. C49F5.1 sams-1 467.87 3028.13 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
47. E04A4.7 cyc-2.1 466.92 3021.96 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
48. C24H10.5 cal-5 465.86 3015.11 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_508864]
49. F27C1.7 atp-3 460.57 2980.85 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
50. F38A3.1 col-81 457.92 2963.72 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
51. C45B2.1 C45B2.1 455.41 2947.50
52. F20H11.3 mdh-2 452.10 2926.03 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
53. T28D6.3 T28D6.3 448.21 2900.90
54. F52D10.3 ftt-2 424.39 2746.72 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
55. T05D4.1 aldo-1 419.27 2713.60 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
56. F08B6.4 unc-87 418.21 2706.75 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
57. M02F4.8 aqp-7 417.16 2699.89 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_508515]
58. F15A2.1 col-184 411.35 2662.32 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
59. W06H8.8 ttn-1 376.92 2439.50 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
60. T05G5.6 ech-6 370.92 2400.67 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
61. T15B7.4 col-142 369.33 2390.39 COLlagen [Source:RefSeq peptide;Acc:NP_504736]
62. T13F3.6 T13F3.6 367.08 2375.77
63. F53A9.10 tnt-2 366.69 2373.26 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
64. C09G5.5 col-80 365.63 2366.40 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
65. R11A5.4 pck-2 363.71 2353.95 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
66. C53B4.5 col-119 351.18 2272.87 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
67. Y49A3A.3 Y49A3A.3 349.54 2262.25
68. T22E5.5 mup-2 347.98 2252.20 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
69. T07C4.5 ttr-15 346.11 2240.09 Transthyretin-like protein 15 [Source:UniProtKB/Swiss-Prot;Acc:Q22288]
70. W07E11.2 flp-3 344.45 2229.35 FMRFamide-like neuropeptides 3 SPLGTMRF-amide TPLGTMRF-amide SAEPFGTMRF-amide NPENDTPFGTMRF-amide ASEDALFGTMRF-amide EAEEPLGTMRF-amide SADDSAPFGTMRF-amide NPLGTMRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q23212]
71. T20G5.2 cts-1 340.04 2200.80 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
72. F56B6.4 gyg-1 334.92 2167.68 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
73. W03F8.1 tni-4 334.75 2166.54 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
74. T20B3.2 tni-3 334.04 2161.97 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
75. Y67H2A.5 Y67H2A.5 324.34 2099.16
76. F01D4.4 egl-21 320.10 2071.75
77. F54E7.2 rps-12 319.04 2064.89 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
78. C36E6.5 mlc-2 318.87 2063.75 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
79. ZK809.8 ZK809.8 316.75 2050.05
80. F13D12.4 alh-8 311.46 2015.78 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
81. F47B7.1 F47B7.1 309.87 2005.50 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
82. ZC21.3 ZC21.3 305.38 1976.50
83. W05B2.5 col-93 300.34 1943.83 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
84. C12D12.2 glt-1 298.22 1930.13 Excitatory amino acid transporter [Source:UniProtKB/Swiss-Prot;Acc:Q10901]
85. F52E4.1 pccb-1 297.69 1926.70 Propionyl Coenzyme A Carboxylase Beta subunit [Source:RefSeq peptide;Acc:NP_741743]
86. F33A8.3 cey-1 295.22 1910.71 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
87. C04F12.4 rpl-14 290.81 1882.16 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
88. K11H12.7 K11H12.7 289.93 1876.45
89. F42G8.12 isp-1 284.10 1838.76 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
90. C34F6.3 col-179 280.93 1818.20 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
91. T04C12.5 act-2 278.46 1802.21 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
92. C51E3.7 egl-3 276.16 1787.37 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
93. F27D9.5 pcca-1 275.81 1785.08 Propionyl-CoA carboxylase alpha chain, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q19842]
94. H28O16.1 H28O16.1 274.40 1775.95 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
95. B0350.2 unc-44 270.34 1749.68 AO66 ankyrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECZ1]
96. ZC101.2 unc-52 266.49 1724.78 Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]
97. F49E2.5 F49E2.5 265.75 1719.98
98. C14B9.1 hsp-12.2 264.69 1713.13 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
99. F31E3.5 eef-1A.1 263.99 1708.56 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
100. ZK1193.1 col-19 263.07 1702.62 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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