C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y47D3A.22

Gene ID Gene Name Reads Transcripts Annotation
Y47D3A.22 mib-1 7159 Y47D3A.22 MIB (MIndBomb) ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_499452]

Genes with expression patterns similar to Y47D3A.22

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y47D3A.22 mib-1 7159 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 MIB (MIndBomb) ubiquitin ligase homolog [Source:RefSeq peptide;Acc:NP_499452]
2. Y25C1A.8 Y25C1A.8 3287 7.491 0.968 0.925 0.924 0.925 0.929 0.961 0.946 0.913 Zinc finger Ran-binding domain-containing protein 2 [Source:RefSeq peptide;Acc:NP_494440]
3. W02D9.4 W02D9.4 1502 7.421 0.948 0.898 0.893 0.898 0.977 0.964 0.979 0.864
4. T08B2.7 ech-1.2 16663 7.392 0.886 0.962 0.896 0.962 0.961 0.958 0.895 0.872 Enoyl-CoA Hydratase [Source:RefSeq peptide;Acc:NP_491789]
5. F46C5.8 rer-1 14181 7.387 0.940 0.904 0.878 0.904 0.959 0.976 0.900 0.926 Protein RER1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P52879]
6. Y110A2AR.2 ubc-15 15884 7.371 0.976 0.917 0.940 0.917 0.954 0.927 0.884 0.856 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_494397]
7. F58A4.10 ubc-7 29547 7.368 0.933 0.915 0.909 0.915 0.972 0.943 0.926 0.855 Probable ubiquitin-conjugating enzyme E2 7 [Source:UniProtKB/Swiss-Prot;Acc:P34477]
8. Y105E8B.8 ero-1 9366 7.366 0.868 0.941 0.915 0.941 0.962 0.931 0.869 0.939 Endoplasmic reticulum oxidoreductin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q7YTU4]
9. K01G5.7 tbb-1 26039 7.366 0.939 0.924 0.932 0.924 0.960 0.940 0.936 0.811 TuBulin, Beta [Source:RefSeq peptide;Acc:NP_499367]
10. E04F6.5 acdh-12 6267 7.357 0.908 0.914 0.926 0.914 0.976 0.960 0.949 0.810 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_001022062]
11. F57H12.1 arf-3 44382 7.354 0.943 0.920 0.876 0.920 0.962 0.893 0.901 0.939 ADP-Ribosylation Factor related [Source:RefSeq peptide;Acc:NP_501336]
12. B0205.3 rpn-10 16966 7.35 0.941 0.927 0.959 0.927 0.960 0.947 0.886 0.803 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_492809]
13. Y108G3AL.1 cul-3 7748 7.346 0.934 0.934 0.949 0.934 0.971 0.887 0.937 0.800 Cullin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q17391]
14. ZK858.7 ZK858.7 2817 7.345 0.947 0.936 0.898 0.936 0.951 0.921 0.898 0.858
15. C47B2.3 tba-2 31086 7.334 0.936 0.936 0.953 0.936 0.953 0.929 0.894 0.797 Tubulin alpha-2 chain [Source:UniProtKB/Swiss-Prot;Acc:P34690]
16. F02E9.7 F02E9.7 2570 7.325 0.922 0.890 0.952 0.890 0.945 0.901 0.930 0.895
17. Y32H12A.5 paqr-2 6739 7.316 0.890 0.897 0.940 0.897 0.950 0.962 0.936 0.844 Progestin and AdipoQ Receptor family [Source:RefSeq peptide;Acc:NP_498148]
18. ZK783.2 upp-1 10266 7.315 0.881 0.935 0.899 0.935 0.959 0.964 0.942 0.800 Uridine PhosPhorylase [Source:RefSeq peptide;Acc:NP_498671]
19. F43G9.4 F43G9.4 2129 7.313 0.957 0.879 0.933 0.879 0.959 0.947 0.940 0.819
20. Y54G2A.5 dml-1 7705 7.312 0.925 0.941 0.948 0.941 0.974 0.932 0.902 0.749 yeast DiM Like [Source:RefSeq peptide;Acc:NP_001023505]
21. C27A12.8 ari-1 6342 7.308 0.927 0.956 0.924 0.956 0.963 0.911 0.864 0.807 ARI (ubiquitin ligase Ariadne) homolog [Source:RefSeq peptide;Acc:NP_491749]
22. K07A1.8 ile-1 16218 7.304 0.938 0.927 0.959 0.927 0.952 0.903 0.821 0.877 Intracellular LEctin [Source:RefSeq peptide;Acc:NP_492548]
23. B0303.4 B0303.4 6248 7.303 0.961 0.937 0.913 0.937 0.885 0.941 0.870 0.859
24. C04F12.10 fce-1 5550 7.301 0.950 0.911 0.906 0.911 0.957 0.950 0.866 0.850 CAAX prenyl protease 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XVE5]
25. C34G6.7 stam-1 9506 7.299 0.933 0.910 0.926 0.910 0.979 0.923 0.925 0.793 Signal transducing adapter molecule 1 [Source:UniProtKB/Swiss-Prot;Acc:O01498]
26. C32F10.1 obr-4 7473 7.291 0.913 0.923 0.934 0.923 0.967 0.919 0.943 0.769 Oxysterol-binding protein [Source:RefSeq peptide;Acc:NP_491691]
27. R06F6.9 ech-4 5838 7.286 0.966 0.900 0.918 0.900 0.945 0.962 0.826 0.869 Enoyl-CoA Hydratase [Source:RefSeq peptide;Acc:NP_496330]
28. T22D1.9 rpn-1 25674 7.282 0.922 0.908 0.925 0.908 0.956 0.947 0.902 0.814 proteasome Regulatory Particle, Non-ATPase-like [Source:RefSeq peptide;Acc:NP_501064]
29. F35G2.2 marb-1 4248 7.279 0.954 0.904 0.885 0.904 0.974 0.958 0.889 0.811 Mitochondrial Associated RiBonuclease homolog [Source:RefSeq peptide;Acc:NP_502315]
30. Y53G8B.4 nipa-1 4677 7.279 0.926 0.939 0.853 0.939 0.966 0.896 0.945 0.815 NIPA1 (NonImprinted gene in Prader-Willi/Angelman syndrome region 1) homolog [Source:RefSeq peptide;Acc:NP_001122733]
31. ZK40.1 acl-9 4364 7.278 0.925 0.912 0.918 0.912 0.965 0.935 0.893 0.818 ACyLtransferase-like [Source:RefSeq peptide;Acc:NP_504644]
32. C13B9.3 copd-1 5986 7.273 0.946 0.936 0.865 0.936 0.936 0.969 0.812 0.873 Probable coatomer subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q09236]
33. F26H11.5 exl-1 7544 7.267 0.960 0.917 0.922 0.917 0.957 0.892 0.947 0.755 Chloride intracellular channel exl-1 [Source:UniProtKB/Swiss-Prot;Acc:O45405]
34. M18.7 aly-3 7342 7.262 0.922 0.956 0.930 0.956 0.976 0.904 0.860 0.758 Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_001076697]
35. F45G2.4 cope-1 5230 7.261 0.920 0.884 0.897 0.884 0.965 0.978 0.903 0.830 Coatomer subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:O62246]
36. F29B9.4 psr-1 4355 7.258 0.959 0.905 0.971 0.905 0.972 0.879 0.924 0.743 Bifunctional arginine demethylase and lysyl-hydroxylase psr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI4]
37. F59B2.5 rpn-6.2 3777 7.246 0.965 0.925 0.953 0.925 0.977 0.864 0.909 0.728 Probable 26S proteasome regulatory subunit rpn-6.2 [Source:UniProtKB/Swiss-Prot;Acc:P34481]
38. F52E1.13 lmd-3 25047 7.239 0.938 0.942 0.921 0.942 0.953 0.929 0.825 0.789 LysM Domain (peptidoglycan binding) protein [Source:RefSeq peptide;Acc:NP_872149]
39. B0464.4 bre-3 7796 7.235 0.960 0.925 0.905 0.925 0.931 0.898 0.903 0.788 Beta-1,4-mannosyltransferase bre-3 [Source:UniProtKB/Swiss-Prot;Acc:Q03562]
40. T03F1.1 uba-5 11792 7.219 0.887 0.885 0.930 0.885 0.967 0.955 0.882 0.828 Ubiquitin-like modifier-activating enzyme 5 [Source:UniProtKB/Swiss-Prot;Acc:P91430]
41. F25B5.4 ubq-1 19910 7.208 0.884 0.918 0.920 0.918 0.942 0.965 0.804 0.857 Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71]
42. Y75B7AL.4 rga-4 7903 7.205 0.957 0.859 0.904 0.859 0.968 0.940 0.922 0.796 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_001041201]
43. C13G3.3 pptr-2 13586 7.196 0.927 0.897 0.914 0.897 0.967 0.905 0.887 0.802 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_001256283]
44. F30A10.6 sac-1 4596 7.185 0.909 0.946 0.942 0.946 0.952 0.914 0.836 0.740 SAC1 PIP phosphatase (yeast Suppressor of ACtin) homolog [Source:RefSeq peptide;Acc:NP_492518]
45. T06E4.1 hcp-2 3535 7.18 0.948 0.901 0.943 0.901 0.969 0.874 0.922 0.722 HoloCentric chromosome binding Protein [Source:RefSeq peptide;Acc:NP_505489]
46. K02B12.3 sec-12 3590 7.172 0.922 0.893 0.868 0.893 0.950 0.915 0.890 0.841 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_492305]
47. T21H3.3 cmd-1 80360 7.169 0.878 0.901 0.889 0.901 0.964 0.941 0.818 0.877 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
48. K02D10.5 snap-29 8184 7.159 0.923 0.898 0.916 0.898 0.961 0.957 0.834 0.772 Soluble NSF attachment protein 29 [Source:UniProtKB/Swiss-Prot;Acc:P83351]
49. B0336.2 arf-1.2 45317 7.157 0.899 0.923 0.773 0.923 0.936 0.937 0.812 0.954 ADP-ribosylation factor 1-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q10943]
50. D1037.4 rab-8 14097 7.155 0.905 0.952 0.939 0.952 0.935 0.914 0.785 0.773 RAB family [Source:RefSeq peptide;Acc:NP_491199]
51. R166.5 mnk-1 28617 7.153 0.923 0.929 0.869 0.929 0.918 0.956 0.746 0.883 MAP kinase iNtegrating Kinase (MNK) homolog [Source:RefSeq peptide;Acc:NP_496272]
52. M03E7.5 memb-2 2568 7.148 0.940 0.885 0.933 0.885 0.975 0.878 0.874 0.778 Golgi SNAP receptor complex member 2 [Source:RefSeq peptide;Acc:NP_504484]
53. C41C4.8 cdc-48.2 7843 7.147 0.894 0.950 0.933 0.950 0.932 0.930 0.777 0.781 Transitional endoplasmic reticulum ATPase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P54812]
54. B0238.11 B0238.11 9926 7.143 0.894 0.922 0.915 0.922 0.985 0.884 0.904 0.717
55. F27D4.5 tag-173 13676 7.14 0.948 0.853 0.717 0.853 0.951 0.976 0.905 0.937
56. ZK546.1 zyg-12 3227 7.139 0.894 0.879 0.855 0.879 0.933 0.960 0.886 0.853 Zygote defective protein 12 [Source:UniProtKB/Swiss-Prot;Acc:Q23529]
57. C07G1.5 hgrs-1 6062 7.134 0.882 0.882 0.893 0.882 0.979 0.914 0.907 0.795 Hepatocyte Growth factor-Regulated TK Substrate (HRS) family [Source:RefSeq peptide;Acc:NP_501375]
58. T26A5.8 T26A5.8 2463 7.114 0.953 0.861 0.928 0.861 0.943 0.942 0.837 0.789
59. T27F2.3 bir-1 4216 7.112 0.940 0.874 0.932 0.874 0.986 0.875 0.900 0.731 BIR (baculovirus inhibitory repeat) family [Source:RefSeq peptide;Acc:NP_505949]
60. H05C05.2 H05C05.2 3688 7.109 0.962 0.894 0.912 0.894 0.967 0.898 0.817 0.765
61. F20G4.3 nmy-2 27210 7.108 0.896 0.941 0.952 0.941 0.910 0.925 0.821 0.722 Non-muscle MYosin [Source:RefSeq peptide;Acc:NP_492186]
62. F48A11.5 ubxn-3 3131 7.105 0.880 0.901 0.874 0.901 0.957 0.881 0.915 0.796 UBX-containing protein in Nematodes [Source:RefSeq peptide;Acc:NP_001022180]
63. F29B9.2 jmjd-1.2 8569 7.105 0.894 0.955 0.921 0.955 0.923 0.871 0.834 0.752 Lysine-specific demethylase 7 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9GYI0]
64. Y39E4B.5 Y39E4B.5 6601 7.102 0.916 0.851 0.742 0.851 0.945 0.971 0.888 0.938
65. ZK688.5 ZK688.5 3899 7.099 0.899 0.911 0.792 0.911 0.956 0.910 0.900 0.820
66. F29D11.2 capg-1 9440 7.098 0.874 0.880 0.903 0.880 0.966 0.872 0.929 0.794 CAP-G condensin subunit [Source:RefSeq peptide;Acc:NP_492128]
67. C32D5.10 C32D5.10 2743 7.092 0.922 0.899 0.780 0.899 0.941 0.955 0.828 0.868 Uncharacterized RING finger protein C32D5.10 [Source:UniProtKB/Swiss-Prot;Acc:Q09268]
68. T09B4.2 T09B4.2 2820 7.086 0.952 0.876 0.896 0.876 0.975 0.904 0.883 0.724
69. M18.8 dhhc-6 7929 7.084 0.902 0.870 0.916 0.870 0.973 0.885 0.902 0.766 Palmitoyltransferase [Source:RefSeq peptide;Acc:NP_502302]
70. F23B12.8 bmk-1 2519 7.076 0.968 0.862 0.929 0.862 0.966 0.875 0.899 0.715 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001256586]
71. H25P06.2 cdk-9 3518 7.073 0.964 0.879 0.927 0.879 0.978 0.869 0.821 0.756 Probable cyclin-dependent kinase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9TVL3]
72. M04F3.1 rpa-2 4944 7.07 0.897 0.936 0.939 0.936 0.960 0.851 0.894 0.657 Replication Protein A homolog [Source:RefSeq peptide;Acc:NP_491446]
73. C06A8.5 spdl-1 4091 7.048 0.943 0.859 0.940 0.859 0.973 0.874 0.898 0.702 SPinDLy (Drosophila chromosome segregation) homolog [Source:RefSeq peptide;Acc:NP_495637]
74. ZK688.8 gly-3 8885 7.043 0.914 0.957 0.904 0.957 0.902 0.829 0.800 0.780 Polypeptide N-acetylgalactosaminyltransferase 3 [Source:UniProtKB/Swiss-Prot;Acc:P34678]
75. C18A3.4 osta-2 11457 7.038 0.959 0.840 0.811 0.840 0.886 0.919 0.864 0.919 Organic solute transporter alpha-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18071]
76. C30H6.9 C30H6.9 1335 7.029 0.971 0.816 0.944 0.816 0.937 0.869 0.904 0.772
77. F59E10.3 copz-1 5962 7.029 0.959 0.930 0.929 0.930 0.836 0.893 0.737 0.815 Probable coatomer subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:O17901]
78. C18E3.7 ppw-1 3907 7.027 0.854 0.907 0.936 0.907 0.961 0.898 0.825 0.739 Piwi-like protein [Source:RefSeq peptide;Acc:NP_740835]
79. F56C11.3 F56C11.3 2216 7.012 0.880 0.878 0.924 0.878 0.966 0.872 0.890 0.724 Sulfhydryl oxidase [Source:RefSeq peptide;Acc:NP_490690]
80. C27A2.3 ify-1 13926 7.008 0.861 0.903 0.906 0.903 0.959 0.857 0.903 0.716 Interactor of FizzY protein [Source:RefSeq peptide;Acc:NP_494931]
81. Y39G10AR.2 zwl-1 3666 6.997 0.937 0.932 0.951 0.932 0.939 0.850 0.821 0.635 Protein zwilch homolog [Source:UniProtKB/Swiss-Prot;Acc:Q95XP9]
82. K09H11.3 rga-3 6319 6.981 0.943 0.870 0.943 0.870 0.958 0.858 0.862 0.677 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_504503]
83. F35G12.1 mlcd-1 3697 6.974 0.925 0.830 0.811 0.830 0.968 0.930 0.870 0.810 MaLonyl CoA Decarboxylase [Source:RefSeq peptide;Acc:NP_001022561]
84. F38E11.5 copb-2 19313 6.97 0.964 0.897 0.897 0.897 0.877 0.862 0.711 0.865 Probable coatomer subunit beta' [Source:UniProtKB/Swiss-Prot;Acc:Q20168]
85. F56A6.1 sago-2 2105 6.963 0.875 0.890 0.883 0.890 0.964 0.846 0.835 0.780 Piwi-like protein [Source:RefSeq peptide;Acc:NP_490758]
86. Y53C12A.1 wee-1.3 16766 6.961 0.865 0.891 0.932 0.891 0.965 0.872 0.864 0.681 Membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase wee-1.3 [Source:UniProtKB/Swiss-Prot;Acc:O18209]
87. M01F1.4 M01F1.4 5080 6.957 0.869 0.901 0.766 0.901 0.940 0.963 0.754 0.863
88. T03F1.8 guk-1 9333 6.956 0.903 0.965 0.960 0.965 0.847 0.844 0.653 0.819 GUanylate Kinase [Source:RefSeq peptide;Acc:NP_491243]
89. Y71F9B.7 plk-2 6594 6.943 0.905 0.883 0.939 0.883 0.964 0.873 0.810 0.686 Serine/threonine-protein kinase plk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9N2L7]
90. C02F5.1 knl-1 6637 6.938 0.880 0.916 0.945 0.916 0.955 0.829 0.849 0.648 Kinetochore null protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34278]
91. R74.4 dnj-16 3492 6.93 0.878 0.918 0.908 0.918 0.957 0.884 0.753 0.714 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001254890]
92. H04D03.1 enu-3.1 3447 6.926 0.956 0.876 0.899 0.876 0.919 0.899 0.795 0.706 ENhancer of Uncoordination [Source:RefSeq peptide;Acc:NP_499302]
93. F26F4.6 F26F4.6 2992 6.921 0.915 0.932 0.930 0.932 0.972 0.839 0.776 0.625
94. K08E3.6 cyk-4 8158 6.913 0.887 0.929 0.967 0.929 0.924 0.822 0.808 0.647 CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
95. W08G11.4 pptr-1 18411 6.913 0.956 0.927 0.872 0.927 0.884 0.861 0.710 0.776 Protein Phosphatase 2A (Two A) Regulatory subunit [Source:RefSeq peptide;Acc:NP_507133]
96. Y111B2A.1 Y111B2A.1 2379 6.905 0.880 0.870 0.895 0.870 0.971 0.858 0.852 0.709
97. Y105E8B.4 bath-40 6638 6.9 0.821 0.870 0.849 0.870 0.957 0.903 0.847 0.783 BTB and MATH domain-containing protein 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9NF14]
98. F07C3.4 glo-4 4468 6.881 0.951 0.782 0.828 0.782 0.920 0.904 0.892 0.822 X-linked retinitis pigmentosa GTPase regulator homolog [Source:UniProtKB/Swiss-Prot;Acc:Q5DX34]
99. R06C7.8 bub-1 1939 6.873 0.813 0.899 0.878 0.899 0.962 0.856 0.887 0.679 Mitotic checkpoint serine/threonine-protein kinase BUB1 [Source:UniProtKB/Swiss-Prot;Acc:Q21776]
100. C01H6.5 nhr-23 6765 6.869 0.901 0.939 0.884 0.939 0.959 0.863 0.765 0.619 Nuclear hormone receptor family member nhr-23 [Source:UniProtKB/Swiss-Prot;Acc:P41828]

There are 302 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA