C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for Y18H1A.6

Gene ID Gene Name Reads Transcripts Annotation
Y18H1A.6 pif-1 219 Y18H1A.6a, Y18H1A.6b, Y18H1A.6c, Y18H1A.6d PIF1p DNA helicase (yeast) homolog [Source:RefSeq peptide;Acc:NP_001293173]

Genes with expression patterns similar to Y18H1A.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y18H1A.6 pif-1 219 2 1.000 - - - 1.000 - - - PIF1p DNA helicase (yeast) homolog [Source:RefSeq peptide;Acc:NP_001293173]
2. F28C6.2 aptf-3 2265 1.895 0.923 - - - 0.972 - - - AP-2 Transcription Factor family [Source:RefSeq peptide;Acc:NP_495819]
3. R02F2.5 R02F2.5 237 1.864 0.909 - - - 0.955 - - -
4. T23D8.7 hpo-24 4372 1.861 0.908 - - - 0.953 - - -
5. K08H2.2 K08H2.2 0 1.859 0.904 - - - 0.955 - - -
6. C02F5.4 cids-1 3125 1.858 0.890 - - - 0.968 - - - CID domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34281]
7. C30B5.1 szy-4 4038 1.85 0.871 - - - 0.979 - - - Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_495240]
8. F22B3.4 gfat-2 13687 1.848 0.877 - - - 0.971 - - - Glutamine-Fructose 6-phosphate AminoTransferase homolog [Source:RefSeq peptide;Acc:NP_502156]
9. T23D8.9 sys-1 1208 1.847 0.886 - - - 0.961 - - - SYmmetrical Sister cell hermaphrodite gonad defect [Source:RefSeq peptide;Acc:NP_492639]
10. H02I12.1 cbd-1 54348 1.84 0.874 - - - 0.966 - - - Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
11. Y41D4A.1 Y41D4A.1 55 1.84 0.876 - - - 0.964 - - -
12. C04E6.12 C04E6.12 0 1.832 0.869 - - - 0.963 - - -
13. C01F6.4 fem-3 2478 1.831 0.880 - - - 0.951 - - - Sex-determination protein fem-3 [Source:UniProtKB/Swiss-Prot;Acc:P34691]
14. C44C10.3 C44C10.3 0 1.829 0.867 - - - 0.962 - - -
15. C32E8.8 ptr-2 7774 1.822 0.867 - - - 0.955 - - - PaTched Related family [Source:RefSeq peptide;Acc:NP_491221]
16. F41H10.11 sand-1 5039 1.816 0.857 - - - 0.959 - - - SAND endocytosis protein family [Source:RefSeq peptide;Acc:NP_500791]
17. R11D1.2 R11D1.2 0 1.803 0.852 - - - 0.951 - - -
18. F59B2.6 zif-1 10453 1.801 0.847 - - - 0.954 - - - Zinc finger-interacting factor 1 [Source:UniProtKB/Swiss-Prot;Acc:P34482]
19. R03D7.7 nos-1 8407 1.797 0.841 - - - 0.956 - - - NanOS related [Source:RefSeq peptide;Acc:NP_496358]
20. C27A12.4 C27A12.4 0 1.796 0.846 - - - 0.950 - - -
21. F54D5.11 F54D5.11 2756 1.795 0.836 - - - 0.959 - - - Transcription initiation factor IIE subunit beta [Source:RefSeq peptide;Acc:NP_496466]
22. T07G12.10 zim-2 776 1.777 0.823 - - - 0.954 - - - Zinc finger In Meiosis [Source:RefSeq peptide;Acc:NP_501952]
23. W02B12.11 W02B12.11 8336 1.767 0.815 - - - 0.952 - - - N-acetyllactosamine synthase; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGS9]
24. Y17G7B.4 dhps-1 960 1.722 0.747 - - - 0.975 - - - Probable deoxyhypusine synthase [Source:UniProtKB/Swiss-Prot;Acc:Q9XXJ0]
25. Y95B8A.11 him-19 496 1.684 0.719 - - - 0.965 - - - High Incidence of Males (increased X chromosome loss) [Source:RefSeq peptide;Acc:NP_001293191]
26. R08D7.4 R08D7.4 1958 1.678 0.724 - - - 0.954 - - -
27. F41H10.10 htp-1 6425 1.655 0.701 - - - 0.954 - - - Him-Three Paralog [Source:RefSeq peptide;Acc:NP_500799]
28. C01G5.8 fan-1 1432 1.644 0.963 - - - 0.681 - - - Fanconi-associated nuclease 1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P90740]
29. Y57A10A.5 Y57A10A.5 3228 1.61 0.658 - - - 0.952 - - -
30. Y75B8A.8 Y75B8A.8 2429 1.396 0.446 - - - 0.950 - - -
31. Y54H5A.1 Y54H5A.1 12787 0.959 - - - - 0.959 - - -

Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA