C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R11E3.4

Gene ID Gene Name Reads Transcripts Annotation
R11E3.4 set-15 1832 R11E3.4 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_500642]

Genes with expression patterns similar to R11E3.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R11E3.4 set-15 1832 7 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_500642]
2. F20H11.5 ddo-3 2355 5.744 - 0.774 0.633 0.774 0.842 0.963 0.761 0.997 D-aspartate oxidase 3 [Source:UniProtKB/Swiss-Prot;Acc:O01739]
3. K12H6.6 K12H6.6 629 5.416 - 0.741 - 0.741 0.972 0.986 0.978 0.998
4. F40H3.1 F40H3.1 7776 5.333 - 0.715 - 0.715 0.962 0.983 0.961 0.997
5. D2096.11 D2096.11 1235 5.28 - 0.741 - 0.741 0.865 0.994 0.941 0.998
6. C16C8.11 C16C8.11 979 5.025 - 0.704 - 0.704 0.967 0.923 0.735 0.992
7. T26A8.4 T26A8.4 7967 4.982 - 0.757 - 0.757 0.954 0.871 0.670 0.973
8. F18F11.1 F18F11.1 1919 4.471 - 0.300 - 0.300 0.978 0.956 0.938 0.999
9. B0207.6 B0207.6 1589 4.442 - 0.787 - 0.787 0.089 0.957 0.984 0.838
10. K11D12.7 K11D12.7 11107 4.41 - 0.337 - 0.337 0.896 0.962 0.900 0.978
11. F09C8.1 F09C8.1 467 4.339 - 0.190 - 0.190 0.978 0.996 0.989 0.996
12. Y37E11AR.1 best-20 1404 4.336 - 0.635 0.743 0.635 0.400 0.962 0.826 0.135 BESTrophin (chloride channel) homolog [Source:RefSeq peptide;Acc:NP_500411]
13. F44A6.1 nucb-1 9013 4.32 - 0.690 0.635 0.690 0.167 0.952 0.625 0.561 NUCleoBindin homolog [Source:RefSeq peptide;Acc:NP_741885]
14. F48E3.3 uggt-1 6543 4.32 - 0.725 0.671 0.725 0.082 0.960 0.606 0.551 UDP-Glucose Glycoprotein glucosylTransferase [Source:RefSeq peptide;Acc:NP_509268]
15. F13B9.8 fis-2 2392 4.154 - 0.870 0.756 0.870 -0.028 0.950 0.217 0.519 S. cerevisiae FIS1-related [Source:RefSeq peptide;Acc:NP_001024559]
16. T05E11.5 imp-2 28289 4.11 - 0.843 0.836 0.843 0.114 0.957 0.253 0.264 Intramembrane protease 2 [Source:UniProtKB/Swiss-Prot;Acc:P49049]
17. ZK593.3 ZK593.3 5651 4.024 - 0.213 - 0.213 0.696 0.958 0.955 0.989
18. T26E3.7 T26E3.7 0 3.966 - - - - 0.979 0.998 0.990 0.999
19. E03H12.4 E03H12.4 0 3.964 - - - - 0.976 0.998 0.991 0.999
20. C16C8.8 C16C8.8 1533 3.963 - - - - 0.975 0.999 0.991 0.998
21. K05C4.2 K05C4.2 0 3.962 - - - - 0.979 0.997 0.990 0.996 Protein jagunal homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XUU9]
22. B0228.9 B0228.9 0 3.961 - - - - 0.981 0.997 0.991 0.992
23. F56D3.1 F56D3.1 66 3.96 - - - - 0.976 0.998 0.988 0.998
24. C16C8.9 C16C8.9 11666 3.96 - - - - 0.971 0.999 0.991 0.999
25. Y51H4A.26 fipr-28 13604 3.959 - - - - 0.979 0.997 0.984 0.999 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_502968]
26. Y48G9A.7 Y48G9A.7 0 3.959 - - - - 0.973 0.997 0.990 0.999
27. C16D9.1 C16D9.1 844 3.959 - - - - 0.976 0.995 0.989 0.999
28. F32A7.8 F32A7.8 0 3.959 - - - - 0.975 0.995 0.991 0.998
29. Y110A2AL.7 Y110A2AL.7 12967 3.958 - - - - 0.978 0.998 0.984 0.998
30. E02H9.2 E02H9.2 0 3.954 - - - - 0.974 0.994 0.987 0.999
31. D2096.14 D2096.14 0 3.953 - - - - 0.980 0.994 0.983 0.996
32. D2096.6 D2096.6 0 3.953 - - - - 0.974 0.999 0.986 0.994
33. Y51H4A.10 fip-7 17377 3.951 - - - - 0.975 0.999 0.981 0.996 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_502967]
34. Y18H1A.9 Y18H1A.9 0 3.95 - - - - 0.977 0.983 0.991 0.999
35. K10H10.12 K10H10.12 168 3.949 - - - - 0.968 0.998 0.986 0.997
36. Y49F6B.8 Y49F6B.8 1154 3.946 - - - - 0.975 0.988 0.984 0.999
37. F40G9.8 F40G9.8 0 3.945 - - - - 0.976 0.987 0.983 0.999
38. K12H6.12 K12H6.12 0 3.942 - - - - 0.979 0.992 0.973 0.998
39. C45G9.11 C45G9.11 135 3.942 - - - - 0.978 0.978 0.987 0.999
40. K12H6.9 K12H6.9 21303 3.935 - - - - 0.975 0.988 0.974 0.998
41. C23H5.12 C23H5.12 0 3.931 - - - - 0.977 0.984 0.971 0.999
42. T02H6.10 T02H6.10 0 3.93 - - - - 0.977 0.997 0.958 0.998
43. F47B8.13 F47B8.13 92 3.928 - - - - 0.983 0.977 0.969 0.999
44. Y110A2AL.9 Y110A2AL.9 593 3.925 - - - - 0.976 0.962 0.988 0.999
45. Y51H4A.32 fipr-27 13703 3.925 - - - - 0.975 0.974 0.981 0.995 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001076736]
46. F25E5.10 try-8 19293 3.917 - - - - 0.973 0.997 0.951 0.996 TRYpsin-like protease [Source:RefSeq peptide;Acc:NP_504916]
47. K12H6.5 K12H6.5 3751 3.916 - - - - 0.977 0.957 0.984 0.998
48. T04G9.5 trap-2 25251 3.886 - 0.702 0.555 0.702 0.054 0.959 0.447 0.467 Translocon-associated protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q22169]
49. F46C3.1 pek-1 1742 3.859 - 0.778 0.833 0.778 -0.030 0.959 0.264 0.277 Eukaryotic translation initiation factor 2-alpha kinase pek-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19192]
50. T10D4.4 ins-31 27357 3.83 - - - - 0.978 0.881 0.973 0.998 INSulin related [Source:RefSeq peptide;Acc:NP_494454]
51. C15B12.1 C15B12.1 0 3.82 - - - - 0.978 0.965 0.877 1.000 Putative sarcosine oxidase [Source:UniProtKB/Swiss-Prot;Acc:Q18006]
52. T10C6.2 T10C6.2 0 3.807 - - - - 0.926 0.989 0.987 0.905
53. F17E9.4 F17E9.4 4924 3.792 - -0.071 - -0.071 0.972 0.993 0.972 0.997
54. C16C8.18 C16C8.18 2000 3.784 - - - - 0.965 0.999 0.975 0.845
55. C33G3.6 C33G3.6 83 3.757 - - - - 0.949 0.959 0.864 0.985
56. F09B9.3 erd-2 7180 3.664 - 0.616 0.607 0.616 0.098 0.953 0.334 0.440 ER lumen protein-retaining receptor [Source:UniProtKB/Swiss-Prot;Acc:P48583]
57. C16C8.10 C16C8.10 1270 3.66 - - - - 0.952 0.946 0.776 0.986
58. F17E9.5 F17E9.5 17142 3.658 - 0.362 -0.000 0.362 - 0.995 0.985 0.954
59. C29E4.15 C29E4.15 0 3.65 - - - - 0.962 0.889 0.808 0.991
60. Y43F8C.18 Y43F8C.18 0 3.521 - - - - 0.935 0.980 0.951 0.655
61. C15H9.6 hsp-3 62738 3.447 - 0.520 0.552 0.520 0.076 0.958 0.453 0.368 Heat shock 70 kDa protein C [Source:UniProtKB/Swiss-Prot;Acc:P27420]
62. F14D2.8 F14D2.8 0 3.407 - - 0.005 - 0.978 0.951 0.707 0.766
63. Y47D3B.4 Y47D3B.4 0 3.37 - - 0.021 - 0.897 0.986 0.797 0.669
64. ZK930.4 ZK930.4 1633 3.361 - - 0.302 - 0.736 0.981 0.744 0.598
65. K08E3.10 mlc-7 5415 3.36 - 0.097 0.029 0.097 0.551 0.927 0.707 0.952 Myosin Light Chain [Source:RefSeq peptide;Acc:NP_001022669]
66. Y75B7AL.2 Y75B7AL.2 1590 3.34 - - - - 0.431 0.957 0.985 0.967
67. F58F12.1 F58F12.1 47019 3.268 - 0.665 - 0.665 0.422 0.955 0.354 0.207 ATP synthase subunit delta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09544]
68. F52E1.8 pho-6 525 3.251 - - - - 0.934 0.904 0.421 0.992 intestinal acid PHOsphatase [Source:RefSeq peptide;Acc:NP_505167]
69. R74.2 R74.2 0 3.241 - - - - 0.323 0.959 0.985 0.974
70. Y49F6B.14 Y49F6B.14 0 3.178 - - - - 0.841 0.853 0.518 0.966
71. F16G10.11 F16G10.11 0 3.152 - - - - 0.839 0.963 0.971 0.379
72. R11G10.1 avr-15 1297 3.091 - - - - 0.888 0.702 0.522 0.979 GluClalpha2B protein [Source:UniProtKB/TrEMBL;Acc:O17548]
73. C37A2.6 C37A2.6 342 3.089 - - 0.929 - 0.052 0.953 0.975 0.180 Methyltransferase-like protein 20 homolog [Source:UniProtKB/Swiss-Prot;Acc:O01503]
74. Y43F8C.17 Y43F8C.17 1222 3.061 - - - - 0.759 0.976 0.961 0.365
75. F47B7.3 F47B7.3 0 3.019 - - 0.658 - 0.362 0.970 0.647 0.382
76. F32E10.9 F32E10.9 1011 3.009 - 0.541 - 0.541 - 0.950 0.977 -
77. K04F1.9 K04F1.9 388 2.975 - - - - - 0.998 0.981 0.996
78. K07E8.6 K07E8.6 0 2.975 - - - - - 0.988 0.989 0.998
79. Y37D8A.8 Y37D8A.8 610 2.941 - - 0.233 - 0.295 0.955 0.817 0.641
80. W05B10.4 W05B10.4 0 2.937 - - - - - 0.957 0.984 0.996
81. F47D12.3 F47D12.3 851 2.93 - - - - - 0.958 0.984 0.988
82. F30A10.12 F30A10.12 1363 2.927 - - - - - 0.959 0.985 0.983
83. R09E10.9 R09E10.9 192 2.927 - - - - - 0.954 0.984 0.989
84. F13E9.11 F13E9.11 143 2.926 - - - - - 0.957 0.985 0.984
85. F47C12.8 F47C12.8 2164 2.921 - - - - - 0.955 0.985 0.981
86. K07B1.1 try-5 2204 2.906 - - - - - 0.956 0.985 0.965 TRYpsin-like protease [Source:RefSeq peptide;Acc:NP_505421]
87. F10G2.1 F10G2.1 31878 2.9 - 0.249 - 0.249 0.371 0.958 0.863 0.210 UPF0376 protein F10G2.1 [Source:UniProtKB/Swiss-Prot;Acc:Q22957]
88. Y73F8A.12 Y73F8A.12 3270 2.897 - 0.268 - 0.268 - 0.977 0.958 0.426
89. F49E11.4 scl-9 4832 2.896 - - - - - 0.958 0.984 0.954 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_502497]
90. F47C12.7 F47C12.7 1497 2.889 - - - - - 0.953 0.985 0.951
91. F28F8.2 acs-2 8633 2.821 - 0.195 0.250 0.195 -0.010 0.947 0.955 0.289 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_506869]
92. F09G8.2 crn-7 856 2.797 - - - - 0.337 0.956 0.658 0.846 Cell-death-related nuclease 7 [Source:UniProtKB/Swiss-Prot;Acc:P34387]
93. C05B5.2 C05B5.2 4449 2.763 - 0.298 - 0.298 - 0.951 0.968 0.248
94. C06E1.7 C06E1.7 126 2.72 - - 0.782 - 0.246 0.981 0.343 0.368 Putative glycosyltransferase C06E1.7 [Source:UniProtKB/Swiss-Prot;Acc:P34302]
95. E02H9.6 E02H9.6 0 2.704 - - - - 0.740 0.985 - 0.979
96. Y62H9A.9 Y62H9A.9 0 2.702 - - - - - 0.957 0.789 0.956
97. T05E11.7 T05E11.7 92 2.694 - - - - - 0.970 0.846 0.878
98. F23H12.1 snb-2 1424 2.693 - 0.328 0.160 0.328 0.002 0.953 0.435 0.487 SyNaptoBrevin related [Source:RefSeq peptide;Acc:NP_506093]
99. T22C8.2 chhy-1 1377 2.689 - -0.073 0.009 -0.073 - 0.962 0.895 0.969 Hyaluronidase [Source:RefSeq peptide;Acc:NP_495830]
100. Y43B11AR.3 Y43B11AR.3 332 2.678 - 0.588 0.019 0.588 -0.026 0.953 0.547 0.009

There are 96 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA