C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F53F10.2

Gene ID Gene Name Reads Transcripts Annotation
F53F10.2 F53F10.2 15941 F53F10.2a.1, F53F10.2a.2, F53F10.2a.3, F53F10.2b

Genes with expression patterns similar to F53F10.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F53F10.2 F53F10.2 15941 2 - 1.000 - 1.000 - - - -
2. B0303.3 B0303.3 17117 1.95 - 0.975 - 0.975 - - - -
3. T03F1.3 pgk-1 25964 1.94 - 0.970 - 0.970 - - - - Probable phosphoglycerate kinase [Source:UniProtKB/Swiss-Prot;Acc:P91427]
4. B0432.4 misc-1 17348 1.94 - 0.970 - 0.970 - - - - MItochondrial Solute Carrier [Source:RefSeq peptide;Acc:NP_493694]
5. W06H8.1 rme-1 35024 1.94 - 0.970 - 0.970 - - - - Receptor Mediated Endocytosis [Source:RefSeq peptide;Acc:NP_001024192]
6. F54F2.8 prx-19 15821 1.938 - 0.969 - 0.969 - - - - Putative peroxisomal biogenesis factor 19 [Source:UniProtKB/Swiss-Prot;Acc:P34453]
7. T05E11.5 imp-2 28289 1.938 - 0.969 - 0.969 - - - - Intramembrane protease 2 [Source:UniProtKB/Swiss-Prot;Acc:P49049]
8. F57A10.3 haf-3 6896 1.936 - 0.968 - 0.968 - - - - HAlF transporter (PGP related) [Source:RefSeq peptide;Acc:NP_506927]
9. F40F9.6 aagr-3 20254 1.934 - 0.967 - 0.967 - - - - Acid Alpha Glucosidase Relate [Source:RefSeq peptide;Acc:NP_001263844]
10. F25H5.3 pyk-1 71675 1.932 - 0.966 - 0.966 - - - - Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
11. ZK370.8 ZK370.8 9419 1.926 - 0.963 - 0.963 - - - - TPR repeat-containing protein ZK370.8 [Source:UniProtKB/Swiss-Prot;Acc:Q02335]
12. F31C3.3 F31C3.3 31153 1.926 - 0.963 - 0.963 - - - -
13. D2024.6 cap-1 13880 1.926 - 0.963 - 0.963 - - - - F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
14. C24F3.1 tram-1 21190 1.924 - 0.962 - 0.962 - - - - Translocating chain-associated membrane protein [Source:RefSeq peptide;Acc:NP_501869]
15. Y57G11C.10 gdi-1 38397 1.924 - 0.962 - 0.962 - - - - GDI (RabGDP Dissociation Inhibitor) family [Source:RefSeq peptide;Acc:NP_001041043]
16. C26C6.2 goa-1 26429 1.924 - 0.962 - 0.962 - - - - Guanine nucleotide-binding protein G(o) subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P51875]
17. C56G2.7 C56G2.7 41731 1.924 - 0.962 - 0.962 - - - - Proteasomal ubiquitin receptor ADRM1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09289]
18. ZK1307.8 ZK1307.8 6985 1.922 - 0.961 - 0.961 - - - -
19. ZK637.8 unc-32 13714 1.922 - 0.961 - 0.961 - - - - Probable V-type proton ATPase 116 kDa subunit a [Source:UniProtKB/Swiss-Prot;Acc:P30628]
20. C47E12.3 C47E12.3 6376 1.922 - 0.961 - 0.961 - - - - alpha-1,2-Mannosidase [Source:RefSeq peptide;Acc:NP_501802]
21. F53F10.4 unc-108 41213 1.922 - 0.961 - 0.961 - - - - Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
22. F57H12.1 arf-3 44382 1.92 - 0.960 - 0.960 - - - - ADP-Ribosylation Factor related [Source:RefSeq peptide;Acc:NP_501336]
23. ZK686.3 ZK686.3 23487 1.92 - 0.960 - 0.960 - - - - Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:P34669]
24. H43I07.3 H43I07.3 5227 1.92 - 0.960 - 0.960 - - - -
25. F55A8.2 egl-4 28504 1.92 - 0.960 - 0.960 - - - - cGMP-dependent protein kinase egl-4 [Source:UniProtKB/Swiss-Prot;Acc:O76360]
26. F52A8.1 F52A8.1 29537 1.92 - 0.960 - 0.960 - - - -
27. K11D9.2 sca-1 71133 1.92 - 0.960 - 0.960 - - - - Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
28. F12F6.6 sec-24.1 10754 1.918 - 0.959 - 0.959 - - - - yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502178]
29. K05C4.11 sol-2 16560 1.918 - 0.959 - 0.959 - - - - Suppressor Of Lurcher movement defect [Source:RefSeq peptide;Acc:NP_493560]
30. F46C5.8 rer-1 14181 1.918 - 0.959 - 0.959 - - - - Protein RER1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P52879]
31. Y42G9A.4 mvk-1 17922 1.916 - 0.958 - 0.958 - - - - MeValonate Kinase [Source:RefSeq peptide;Acc:NP_001022866]
32. C39F7.4 rab-1 44088 1.914 - 0.957 - 0.957 - - - - RAB family [Source:RefSeq peptide;Acc:NP_503397]
33. F46E10.10 mdh-1 38551 1.914 - 0.957 - 0.957 - - - - Malate dehydrogenase [Source:RefSeq peptide;Acc:NP_504656]
34. F57B10.7 tre-1 12811 1.914 - 0.957 - 0.957 - - - - Trehalase [Source:RefSeq peptide;Acc:NP_491890]
35. Y54F10AL.1 Y54F10AL.1 7257 1.914 - 0.957 - 0.957 - - - -
36. C08B11.8 C08B11.8 1672 1.914 - 0.957 - 0.957 - - - - Probable dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q09226]
37. R05F9.6 R05F9.6 15998 1.912 - 0.956 - 0.956 - - - -
38. F57B10.3 ipgm-1 32965 1.912 - 0.956 - 0.956 - - - - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Source:UniProtKB/Swiss-Prot;Acc:G5EFZ1]
39. Y56A3A.21 trap-4 58702 1.912 - 0.956 - 0.956 - - - - TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
40. Y54G2A.2 atln-1 16823 1.912 - 0.956 - 0.956 - - - - ATLastiN (endoplasmic reticulum GTPase) related [Source:RefSeq peptide;Acc:NP_001023492]
41. R31.2 R31.2 29490 1.912 - 0.956 - 0.956 - - - -
42. F57A8.2 yif-1 5608 1.912 - 0.956 - 0.956 - - - - YIP1-Interacting Factor homolog [Source:RefSeq peptide;Acc:NP_001041126]
43. K07A1.8 ile-1 16218 1.91 - 0.955 - 0.955 - - - - Intracellular LEctin [Source:RefSeq peptide;Acc:NP_492548]
44. R07H5.2 cpt-2 3645 1.91 - 0.955 - 0.955 - - - - Carnitine Palmitoyl Transferase [Source:RefSeq peptide;Acc:NP_001040977]
45. Y55B1BM.1 stim-1 3427 1.91 - 0.955 - 0.955 - - - - Stromal interaction molecule 1 [Source:UniProtKB/Swiss-Prot;Acc:G5EF60]
46. W02D3.2 dhod-1 3816 1.91 - 0.955 - 0.955 - - - - Dihydroorotate dehydrogenase (quinone), mitochondrial [Source:RefSeq peptide;Acc:NP_491930]
47. R07G3.1 cdc-42 35737 1.91 - 0.955 - 0.955 - - - - Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062]
48. T26A5.6 T26A5.6 9194 1.91 - 0.955 - 0.955 - - - -
49. F45D3.5 sel-1 14277 1.91 - 0.955 - 0.955 - - - - Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_506144]
50. C30H7.2 C30H7.2 14364 1.91 - 0.955 - 0.955 - - - -
51. F54C8.7 F54C8.7 12800 1.91 - 0.955 - 0.955 - - - -
52. E01G4.3 E01G4.3 29028 1.908 - 0.954 - 0.954 - - - -
53. F44E7.4 F44E7.4 11577 1.908 - 0.954 - 0.954 - - - -
54. F49E8.6 F49E8.6 10001 1.908 - 0.954 - 0.954 - - - -
55. ZK792.6 let-60 16967 1.908 - 0.954 - 0.954 - - - - Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
56. Y40B1B.8 Y40B1B.8 4877 1.908 - 0.954 - 0.954 - - - -
57. F15C11.2 ubql-1 22588 1.908 - 0.954 - 0.954 - - - - UBiQuiLin [Source:RefSeq peptide;Acc:NP_740884]
58. F25D7.1 cup-2 14977 1.906 - 0.953 - 0.953 - - - - Derlin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93561]
59. H25P06.1 hxk-2 10634 1.906 - 0.953 - 0.953 - - - - Hexokinase [Source:RefSeq peptide;Acc:NP_492905]
60. R10E11.1 cbp-1 20447 1.906 - 0.953 - 0.953 - - - -
61. B0041.2 ain-2 13092 1.906 - 0.953 - 0.953 - - - - ALG-1 INteracting protein [Source:RefSeq peptide;Acc:NP_001249682]
62. C29H12.2 C29H12.2 11018 1.906 - 0.953 - 0.953 - - - -
63. ZK265.9 fitm-2 8255 1.906 - 0.953 - 0.953 - - - - FIT family protein fitm-2 [Source:UniProtKB/Swiss-Prot;Acc:Q5CZ37]
64. H24K24.3 H24K24.3 11508 1.906 - 0.953 - 0.953 - - - - Alcohol dehydrogenase class-3 [Source:UniProtKB/Swiss-Prot;Acc:Q17335]
65. F46A9.5 skr-1 31598 1.906 - 0.953 - 0.953 - - - - Skp1-related protein [Source:UniProtKB/Swiss-Prot;Acc:G5ECU1]
66. F09E5.15 prdx-2 52429 1.906 - 0.953 - 0.953 - - - - PeRoxireDoXin [Source:RefSeq peptide;Acc:NP_872052]
67. Y54G2A.18 Y54G2A.18 11297 1.906 - 0.953 - 0.953 - - - - 4D656; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EBI0]
68. F26H9.6 rab-5 23942 1.906 - 0.953 - 0.953 - - - - RAB family [Source:RefSeq peptide;Acc:NP_492481]
69. W06A7.3 ret-1 58319 1.904 - 0.952 - 0.952 - - - - Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
70. F43E2.7 mtch-1 30689 1.904 - 0.952 - 0.952 - - - - MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
71. ZK669.4 ZK669.4 15701 1.904 - 0.952 - 0.952 - - - - Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q23571]
72. M106.3 M106.3 9135 1.904 - 0.952 - 0.952 - - - -
73. F46E10.9 dpy-11 16851 1.904 - 0.952 - 0.952 - - - - DumPY: shorter than wild-type [Source:RefSeq peptide;Acc:NP_504655]
74. T23G11.7 T23G11.7 10001 1.902 - 0.951 - 0.951 - - - -
75. Y48G9A.8 ppk-2 8863 1.902 - 0.951 - 0.951 - - - - PIP Kinase [Source:RefSeq peptide;Acc:NP_497500]
76. ZK370.5 pdhk-2 9358 1.902 - 0.951 - 0.951 - - - - Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q02332]
77. C26E6.11 mmab-1 4385 1.9 - 0.950 - 0.950 - - - - MethylMalonic Aciduria type B homolog [Source:RefSeq peptide;Acc:NP_498038]
78. T14G10.5 T14G10.5 7960 1.9 - 0.950 - 0.950 - - - - Probable coatomer subunit gamma [Source:UniProtKB/Swiss-Prot;Acc:Q22498]
79. B0035.5 gspd-1 4613 1.9 - 0.950 - 0.950 - - - - Glucose-6-phosphate 1-dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q27464]
80. F10G8.6 nubp-1 3262 1.9 - 0.950 - 0.950 - - - - Cytosolic Fe-S cluster assembly factor NUBP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93459]
81. C05D2.6 madf-11 2430 1.9 - 0.950 - 0.950 - - - - MADF domain transcription factor [Source:RefSeq peptide;Acc:NP_001033347]
82. B0286.4 ntl-2 14207 1.9 - 0.950 - 0.950 - - - - NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_494772]
83. Y37E11AM.3 Y37E11AM.3 2883 1.9 - 0.950 - 0.950 - - - -
84. F32D1.2 hpo-18 33234 1.9 - 0.950 - 0.950 - - - -
85. C54G10.3 pmp-3 8899 1.9 - 0.950 - 0.950 - - - - Peroxisomal Membrane Protein related [Source:RefSeq peptide;Acc:NP_001256607]
86. K08H10.4 uda-1 8046 1.9 - 0.950 - 0.950 - - - - Nucleoside-diphosphatase uda-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XU84]
87. F44B9.4 cit-1.1 4631 1.9 - 0.950 - 0.950 - - - - Cyclin-T1.1 [Source:UniProtKB/Swiss-Prot;Acc:P34425]

Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA