C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for B0238.10

Gene ID Gene Name Reads Transcripts Annotation
B0238.10 natc-2 1209 B0238.10 N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_504411]

Genes with expression patterns similar to B0238.10

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. B0238.10 natc-2 1209 7 1.000 1.000 1.000 1.000 1.000 1.000 1.000 - N-alpha-AcetylTransferase C complex subunit [Source:RefSeq peptide;Acc:NP_504411]
2. Y59A8B.22 snx-6 9350 5.825 0.950 0.877 0.811 0.877 0.765 0.811 0.734 - Sorting NeXin [Source:RefSeq peptide;Acc:NP_001256763]
3. ZK792.6 let-60 16967 5.678 0.956 0.857 0.807 0.857 0.776 0.916 0.509 - Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
4. D2024.6 cap-1 13880 5.675 0.955 0.858 0.822 0.858 0.782 0.909 0.491 - F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
5. C47E12.5 uba-1 36184 5.653 0.952 0.879 0.799 0.879 0.830 0.706 0.608 - UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
6. Y32H12A.4 szy-2 7927 5.611 0.950 0.837 0.806 0.837 0.774 0.895 0.512 - Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_498147]
7. F47D12.4 hmg-1.2 13779 5.59 0.951 0.850 0.784 0.850 0.846 0.867 0.442 - High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]
8. Y71F9AL.16 arx-1 7692 5.545 0.956 0.859 0.801 0.859 0.784 0.798 0.488 - Actin-related protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I0]
9. F10G8.6 nubp-1 3262 5.466 0.956 0.855 0.808 0.855 0.679 0.723 0.590 - Cytosolic Fe-S cluster assembly factor NUBP1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93459]
10. ZK637.8 unc-32 13714 5.44 0.955 0.864 0.788 0.864 0.778 0.795 0.396 - Probable V-type proton ATPase 116 kDa subunit a [Source:UniProtKB/Swiss-Prot;Acc:P30628]
11. C15H11.4 dhs-22 21674 5.428 0.957 0.867 0.827 0.867 0.760 0.677 0.473 - DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_506570]
12. C17H12.1 dyci-1 9858 5.327 0.953 0.900 0.848 0.900 0.773 0.668 0.285 - DYnein Chain, light Intermediate [Source:RefSeq peptide;Acc:NP_501038]
13. T09A5.12 ztf-17 4702 5.277 0.952 0.835 0.820 0.835 0.760 0.743 0.332 - Zinc finger transcription factor family protein 17 [Source:UniProtKB/Swiss-Prot;Acc:P45972]
14. F13H10.4 mogs-1 3777 5.274 0.952 0.889 0.810 0.889 0.730 0.677 0.327 - Mannosyl-oligosaccharide glucosidase [Source:UniProtKB/Swiss-Prot;Acc:Q19426]
15. R74.8 R74.8 7722 5.263 0.963 0.895 0.816 0.895 0.684 0.640 0.370 -
16. F41E6.9 vps-60 4469 5.24 0.953 0.826 0.784 0.826 0.803 0.696 0.352 - related to yeast Vacuolar Protein Sorting factor [Source:RefSeq peptide;Acc:NP_505219]
17. T07A5.2 unc-50 4604 5.223 0.958 0.834 0.813 0.834 0.766 0.669 0.349 -
18. C06A5.1 inst-1 5068 5.222 0.956 0.905 0.820 0.905 0.709 0.569 0.358 - INtegrator complex SubuniT 1 homolog [Source:RefSeq peptide;Acc:NP_491739]
19. K02F2.1 dpf-3 11465 5.193 0.951 0.890 0.834 0.890 0.774 0.542 0.312 - Dipeptidyl Peptidase Four (IV) family [Source:RefSeq peptide;Acc:NP_491956]
20. F54C8.5 rheb-1 6358 5.17 0.951 0.850 0.772 0.850 0.758 0.639 0.350 - GTP-binding protein Rheb homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P34443]
21. H15N14.2 nsf-1 3900 5.161 0.955 0.821 0.828 0.821 0.724 0.771 0.241 - Vesicle-fusing ATPase [Source:UniProtKB/Swiss-Prot;Acc:Q94392]
22. Y32F6A.3 pap-1 11972 5.154 0.957 0.862 0.824 0.862 0.706 0.629 0.314 - Poly-A Polymerase [Source:RefSeq peptide;Acc:NP_505683]
23. T12A2.2 stt-3 18807 5.146 0.952 0.819 0.816 0.819 0.697 0.757 0.286 - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit stt-3 [Source:UniProtKB/Swiss-Prot;Acc:P46975]
24. R151.7 hsp-75 3265 5.132 0.958 0.786 0.777 0.786 0.710 0.707 0.408 - Heat Shock Protein [Source:RefSeq peptide;Acc:NP_741220]
25. R74.4 dnj-16 3492 5.103 0.952 0.824 0.864 0.824 0.666 0.614 0.359 - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001254890]
26. F12F6.6 sec-24.1 10754 5.089 0.967 0.889 0.807 0.889 0.699 0.630 0.208 - yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502178]
27. Y56A3A.1 ntl-3 10450 5.063 0.958 0.850 0.768 0.850 0.762 0.580 0.295 - NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_001076652]
28. ZK256.1 pmr-1 6290 5.062 0.954 0.862 0.784 0.862 0.726 0.630 0.244 - Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_001021860]
29. ZC518.2 sec-24.2 13037 5.045 0.950 0.877 0.816 0.877 0.694 0.546 0.285 - yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502354]
30. C29E4.4 npp-15 1790 5.025 0.957 0.855 0.773 0.855 0.651 0.514 0.420 - Nuclear pore complex protein 15 [Source:UniProtKB/Swiss-Prot;Acc:P34343]
31. B0035.2 dnj-2 3905 5 0.950 0.834 0.814 0.834 0.716 0.641 0.211 - DnaJ homolog dnj-2 [Source:UniProtKB/Swiss-Prot;Acc:Q17433]
32. T07C4.1 umps-1 1840 4.983 0.960 0.837 0.734 0.837 0.569 0.508 0.538 - Uridine MonoPhosphate Synthetase [Source:RefSeq peptide;Acc:NP_499291]
33. W03F9.5 ttb-1 8682 4.938 0.950 0.861 0.793 0.861 0.691 0.520 0.262 - Transcription initiation factor IIB [Source:UniProtKB/Swiss-Prot;Acc:O16991]
34. C17G10.2 C17G10.2 2288 4.837 0.950 0.889 0.757 0.889 0.562 0.441 0.349 -
35. T14G10.8 T14G10.8 3790 4.815 0.961 0.673 0.839 0.673 0.702 0.672 0.295 -
36. C08C3.2 bath-15 2092 4.773 0.951 0.831 0.759 0.831 0.708 0.445 0.248 - BTB and MATH domain-containing protein 15 [Source:RefSeq peptide;Acc:NP_498694]
37. M03D4.1 zen-4 8185 4.646 0.950 0.851 0.764 0.851 0.679 0.394 0.157 - Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001023312]
38. K08E3.6 cyk-4 8158 4.548 0.952 0.880 0.820 0.880 0.613 0.307 0.096 - CYtoKinesis defect [Source:RefSeq peptide;Acc:NP_499845]
39. C34B4.3 C34B4.3 0 3.784 0.959 - 0.808 - 0.826 0.786 0.405 -
40. C09G9.3 C09G9.3 0 3.74 0.959 - 0.778 - 0.768 0.731 0.504 -
41. F22B8.3 F22B8.3 0 3.662 0.951 - 0.812 - 0.746 0.708 0.445 -
42. F54C9.3 F54C9.3 6900 3.63 0.950 0.288 0.766 0.288 0.544 0.669 0.125 -
43. K08E7.4 K08E7.4 501 3.512 0.952 - 0.816 - 0.701 0.728 0.315 -
44. Y40H4A.2 Y40H4A.2 1458 3.388 0.952 - 0.824 - 0.694 0.648 0.270 -
45. C53D6.5 C53D6.5 0 3.26 0.960 - 0.630 - 0.708 0.567 0.395 -
46. T07F10.5 T07F10.5 122 3.226 0.952 - 0.754 - 0.543 0.515 0.462 -

Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA