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Experiment male1, region R4.

Sample reads: 182,855. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T20G5.7 dod-6 1608.84 8798.82 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
2. H05L03.3 H05L03.3 1291.61 7063.84
3. T27E4.4 fip-2 1200.97 6568.13 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_505350]
4. T27E9.1 ant-1.1 1144.32 6258.31 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
5. K08D12.6 K08D12.6 1002.70 5483.77
6. T04C12.6 act-1 1002.70 5483.77 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
7. F11H8.3 col-8 938.12 5130.58 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
8. F09F7.2 mlc-3 886.00 4845.55 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
9. Y82E9BR.3 Y82E9BR.3 886.00 4845.55 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
10. M03F4.2 act-4 862.20 4715.42 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
11. Y105E8B.1 lev-11 841.81 4603.89 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
12. C53B4.5 col-119 821.42 4492.35 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
13. F46H5.3 F46H5.3 821.42 4492.35 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
14. K12G11.3 sodh-1 821.42 4492.35 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
15. T04C12.4 act-3 821.42 4492.35 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
16. C24F3.6 col-124 802.16 4387.02 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
17. F26F12.1 col-140 785.16 4294.07 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
18. F11C3.3 unc-54 768.17 4201.12 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
19. F02A9.3 far-2 752.30 4114.38 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
20. K02F2.2 ahcy-1 723.98 3959.47 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
21. C06A8.3 C06A8.3 710.38 3885.11
22. T05A1.2 col-122 710.38 3885.11 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
23. C36E6.3 mlc-1 697.92 3816.95 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
24. F11G11.11 col-20 661.67 3618.67 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
25. F07A5.7 unc-15 640.14 3500.94 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
26. C54D10.3 C54D10.3 592.55 3240.69
27. F23B2.5 flp-1 592.55 3240.69 FMRFamide-like neuropeptides 1 PNFMRY-amide AGSDPNFLRF-amide SQPNFLRF-amide ASGDPNFLRF-amide SDPNFLRF-amide AAADPNFLRF-amide SADPNFLRF-amide PNFLRF-amide [Source:UniProtKB/Swiss-Prot;Acc:P41855]
28. F49D11.8 cpn-4 592.55 3240.69 CalPoNin [Source:RefSeq peptide;Acc:NP_492849]
29. C34F6.2 col-178 575.56 3147.75 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
30. K10B3.9 mai-1 567.63 3104.37 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
31. T05A8.3 T05A8.3 559.70 3061.00
32. C14B9.1 hsp-12.2 551.77 3017.62 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
33. F57B1.4 col-160 503.05 2751.18 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
34. C34E10.6 atp-2 497.38 2720.20 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
35. C36E6.5 mlc-2 497.38 2720.20 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
36. E04A4.7 cyc-2.1 497.38 2720.20 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
37. W03G11.1 col-181 490.58 2683.02 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
38. ZC15.8 pqn-94 490.58 2683.02 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
39. F01G4.6 F01G4.6 478.12 2614.86 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
40. F28H1.2 cpn-3 478.12 2614.86 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
41. F25H2.5 ndk-1 472.46 2583.88 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
42. R05G6.7 vdac-1 461.13 2521.91 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
43. Y77E11A.15 col-106 461.13 2521.91 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
44. C45G9.6 C45G9.6 439.60 2404.18
45. F15A4.6 F15A4.6 439.60 2404.18
46. T18D3.4 myo-2 439.60 2404.18 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
47. C34F6.3 col-179 429.40 2348.42 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
48. W03F8.1 tni-4 424.87 2323.63 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
49. T15B7.3 col-143 414.67 2267.86 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
50. R06C7.10 myo-1 405.61 2218.29 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
51. T20G5.2 cts-1 401.08 2193.51 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
52. H28O16.1 H28O16.1 392.01 2143.94 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
53. F26E4.6 F26E4.6 387.48 2119.15
54. R10E11.8 vha-1 384.08 2100.56 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
55. F02A9.2 far-1 379.55 2075.78 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
56. F08B6.4 unc-87 379.55 2075.78 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
57. F08D12.2 F08D12.2 363.69 1989.03
58. F54C1.7 pat-10 363.69 1989.03 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
59. F20H11.3 mdh-2 359.16 1964.24 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
60. F15A2.1 col-184 355.76 1945.65 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
61. Y67H2A.5 Y67H2A.5 355.76 1945.65
62. Y69A2AR.18 Y69A2AR.18 355.76 1945.65
63. ZC21.3 ZC21.3 355.76 1945.65
64. F52H3.7 lec-2 351.23 1920.87 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
65. T25F10.6 clik-1 351.23 1920.87 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
66. K02G10.4 flp-11 347.83 1902.28 FMRFamide-like neuropeptides 11 AMRNALVRF-amide ASGGMRNALVRF-amide SPLDEEDFAPESPLQ-amide NGAPQPFVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q21156]
67. Y37D8A.14 cco-2 336.50 1840.32 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
68. C14F5.3 tnt-3 322.90 1765.96 TropoNin T [Source:RefSeq peptide;Acc:NP_509337]
69. F01D4.4 egl-21 312.70 1710.19
70. R53.4 R53.4 312.70 1710.19 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
71. W09C5.8 W09C5.8 309.31 1691.60
72. C49G7.3 C49G7.3 305.91 1673.01
73. T20G5.8 T20G5.8 305.91 1673.01
74. T21B10.2 enol-1 305.91 1673.01 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
75. F37C12.4 rpl-36 299.11 1635.84 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
76. C51E3.7 egl-3 290.05 1586.27 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
77. Y79H2A.1 brp-1 290.05 1586.27 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
78. Y71H2AM.5 Y71H2AM.5 284.38 1555.28
79. C53C9.2 C53C9.2 280.98 1536.69
80. F20A1.1 F20A1.1 280.98 1536.69
81. F13D12.4 alh-8 277.58 1518.11 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
82. T04C12.5 act-2 277.58 1518.11 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
83. F26D10.3 hsp-1 275.32 1505.71 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
84. T04F8.8 T04F8.8 275.32 1505.71
85. F27C1.7 atp-3 271.92 1487.12 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
86. F52D10.3 ftt-2 271.92 1487.12 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
87. C49F5.1 sams-1 269.65 1474.73 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
88. F29B9.11 F29B9.11 269.65 1474.73
89. F54E7.2 rps-12 269.65 1474.73 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
90. ZK1193.1 col-19 269.65 1474.73 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
91. R11A5.4 pck-2 266.25 1456.14 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
92. W03G11.1b 266.25 1456.14
93. F42C5.8 rps-8 263.99 1443.75 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
94. F53A9.10 tnt-2 263.99 1443.75 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
95. ZK721.2 unc-27 263.99 1443.75 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
96. C45B2.1 C45B2.1 260.59 1425.16
97. F08D12.3 F08D12.3 260.59 1425.16
98. F42G8.12 isp-1 260.59 1425.16 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
99. C04F12.4 rpl-14 258.32 1412.77 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
100. F33A8.3 cey-1 254.92 1394.18 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA