C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y54G2A.4

Gene ID Gene Name Reads Transcripts Annotation
Y54G2A.4 samt-1 3679 Y54G2A.4 SAM (S-Adenosyl Methionine) Transporter [Source:RefSeq peptide;Acc:NP_500274]

Genes with expression patterns similar to Y54G2A.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y54G2A.4 samt-1 3679 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SAM (S-Adenosyl Methionine) Transporter [Source:RefSeq peptide;Acc:NP_500274]
2. F55A12.7 apm-1 5683 6.62 0.757 0.660 0.826 0.660 0.902 0.957 0.931 0.927 AdaPtin, Mu/medium chain (clathrin associated complex) [Source:RefSeq peptide;Acc:NP_491572]
3. F57H12.1 arf-3 44382 6.496 0.850 0.707 0.610 0.707 0.915 0.962 0.862 0.883 ADP-Ribosylation Factor related [Source:RefSeq peptide;Acc:NP_501336]
4. Y105E8B.8 ero-1 9366 6.085 0.748 0.769 0.393 0.769 0.906 0.953 0.825 0.722 Endoplasmic reticulum oxidoreductin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q7YTU4]
5. F54C9.3 F54C9.3 6900 6.016 0.840 0.523 0.500 0.523 0.906 0.955 0.840 0.929
6. C42C1.5 tag-335 4129 6.004 0.818 0.658 0.385 0.658 0.853 0.913 0.762 0.957 Mannose-1-phosphate guanyltransferase beta [Source:UniProtKB/Swiss-Prot;Acc:A3QMC8]
7. Y18D10A.6 nhx-8 3751 6.003 0.715 0.623 0.446 0.623 0.959 0.902 0.864 0.871 Sodium/hydrogen exchanger [Source:RefSeq peptide;Acc:NP_001021728]
8. W02D9.4 W02D9.4 1502 5.646 0.828 0.673 0.327 0.673 0.959 0.814 0.773 0.599
9. F26H11.5 exl-1 7544 5.579 0.779 0.740 0.532 0.740 0.950 0.665 0.771 0.402 Chloride intracellular channel exl-1 [Source:UniProtKB/Swiss-Prot;Acc:O45405]
10. C38H2.3 C38H2.3 0 5.329 0.770 - 0.816 - 0.938 0.947 0.898 0.960
11. F56C11.3 F56C11.3 2216 5.296 0.782 0.747 0.307 0.747 0.971 0.642 0.701 0.399 Sulfhydryl oxidase [Source:RefSeq peptide;Acc:NP_490690]
12. C53B4.7 bre-1 2147 5.227 0.760 - 0.876 - 0.879 0.921 0.830 0.961 GDP-mannose 4,6 dehydratase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18801]
13. Y47G6A.19 Y47G6A.19 0 4.995 0.779 - 0.574 - 0.936 0.956 0.826 0.924
14. Y110A7A.12 spe-5 959 4.95 0.862 0.702 - 0.702 0.950 0.622 0.766 0.346
15. C33C12.9 mtq-2 1073 4.858 0.760 0.698 - 0.698 0.954 0.631 0.752 0.365 MethylTransferase modifying glutamine (Q) [Source:RefSeq peptide;Acc:NP_494209]
16. F23B12.8 bmk-1 2519 4.853 0.811 0.567 0.352 0.567 0.955 0.625 0.637 0.339 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_001256586]
17. ZK973.9 ZK973.9 4555 4.819 0.705 0.647 - 0.647 0.963 0.647 0.808 0.402
18. C50D2.5 C50D2.5 6015 4.78 0.674 0.684 - 0.684 0.965 0.622 0.782 0.369 Splicing factor 3B subunit 6-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q8ITY4]
19. Y40B1A.1 Y40B1A.1 2990 4.776 0.754 0.658 - 0.658 0.953 0.611 0.763 0.379
20. ZK809.3 ZK809.3 10982 4.775 0.715 0.652 - 0.652 0.963 0.631 0.803 0.359
21. C09H10.10 C09H10.10 755 4.774 0.769 0.659 - 0.659 0.964 0.636 0.741 0.346
22. W06D4.2 spe-46 4577 4.515 0.709 0.418 0.304 0.418 0.952 0.635 0.736 0.343
23. ZK524.1 spe-4 2375 4.496 0.763 0.320 0.392 0.320 0.953 0.631 0.725 0.392 Presenilin spe-4 [Source:UniProtKB/Swiss-Prot;Acc:Q01608]
24. Y71H2AR.2 Y71H2AR.2 0 4.473 0.849 - 0.741 - 0.955 0.699 0.763 0.466
25. K01H12.2 ant-1.3 4903 4.371 0.766 0.428 - 0.428 0.957 0.636 0.772 0.384 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_501727]
26. C18E3.3 C18E3.3 1065 4.359 0.744 0.429 - 0.429 0.963 0.628 0.804 0.362
27. T08B2.12 T08B2.12 8628 4.354 0.737 0.463 - 0.463 0.962 0.629 0.774 0.326
28. K12D12.5 K12D12.5 177 4.346 0.749 0.461 - 0.461 0.956 0.623 0.754 0.342
29. F40G12.11 F40G12.11 653 4.329 0.732 0.407 - 0.407 0.974 0.656 0.756 0.397
30. T06D4.1 T06D4.1 761 3.956 0.760 0.306 - 0.306 0.957 0.617 0.660 0.350
31. ZK1307.1 ZK1307.1 2955 3.951 0.703 0.260 - 0.260 0.950 0.609 0.800 0.369
32. Y39A3CL.7 Y39A3CL.7 0 3.845 0.790 - 0.283 - 0.977 0.704 0.762 0.329
33. F56F4.4 F56F4.4 318 3.824 0.792 - 0.211 - 0.955 0.638 0.703 0.525
34. C06A8.3 C06A8.3 193029 3.773 0.761 0.161 - 0.161 0.963 0.599 0.739 0.389
35. F58D5.8 F58D5.8 343 3.733 0.734 - 0.262 - 0.954 0.645 0.764 0.374
36. R13H4.5 R13H4.5 620 3.717 0.710 0.164 - 0.164 0.957 0.631 0.747 0.344
37. F44G3.10 F44G3.10 0 3.643 0.749 - 0.187 - 0.951 0.651 0.744 0.361
38. R02D5.17 R02D5.17 0 3.634 0.731 - 0.142 - 0.974 0.634 0.788 0.365
39. F47B3.2 F47B3.2 1781 3.633 0.724 - 0.185 - 0.953 0.640 0.784 0.347
40. Y67A10A.2 Y67A10A.2 0 3.626 0.701 - 0.188 - 0.963 0.650 0.764 0.360
41. Y25C1A.2 Y25C1A.2 5340 3.614 0.814 - - - 0.969 0.652 0.799 0.380
42. C55A6.6 C55A6.6 0 3.581 0.777 - - - 0.952 0.637 0.802 0.413
43. ZK849.4 best-25 913 3.58 0.831 - - - 0.956 0.640 0.792 0.361 Bestrophin homolog 25 [Source:UniProtKB/Swiss-Prot;Acc:O18303]
44. D2063.4 irld-1 1840 3.571 0.658 - 0.252 - 0.957 0.642 0.707 0.355 Insulin/EGF-Receptor L Domain protein [Source:RefSeq peptide;Acc:NP_001033472]
45. Y116A8A.2 Y116A8A.2 0 3.562 0.677 - 0.177 - 0.969 0.652 0.749 0.338 Major sperm protein [Source:RefSeq peptide;Acc:NP_502992]
46. C50F4.2 pfk-1.2 894 3.559 0.766 - - - 0.973 0.644 0.800 0.376 ATP-dependent 6-phosphofructokinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27483]
47. C01G5.4 C01G5.4 366 3.551 0.788 - - - 0.969 0.651 0.769 0.374
48. F09G8.4 ncr-2 790 3.546 0.760 - - - 0.963 0.662 0.789 0.372 Niemann-Pick C1 protein homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:P34389]
49. F38A1.17 F38A1.17 0 3.545 0.752 - - - 0.966 0.647 0.793 0.387
50. C33F10.11 C33F10.11 2813 3.545 0.759 - - - 0.984 0.647 0.795 0.360
51. K09C8.2 K09C8.2 3123 3.544 0.739 - - - 0.974 0.654 0.788 0.389
52. F25C8.1 F25C8.1 1920 3.542 0.695 - - - 0.966 0.670 0.799 0.412
53. B0207.8 B0207.8 0 3.534 0.788 - - - 0.950 0.625 0.789 0.382
54. Y38F1A.2 Y38F1A.2 1105 3.534 0.744 - - - 0.963 0.646 0.798 0.383
55. K01C8.8 clec-142 186 3.533 0.743 - - - 0.965 0.635 0.829 0.361 C-type LECtin [Source:RefSeq peptide;Acc:NP_495748]
56. Y39E4B.13 Y39E4B.13 523 3.532 0.755 - - - 0.968 0.618 0.815 0.376
57. R05D7.3 R05D7.3 0 3.53 0.758 - - - 0.960 0.639 0.788 0.385
58. ZK688.1 ZK688.1 0 3.524 0.736 - - - 0.968 0.637 0.793 0.390
59. F54A3.4 cbs-2 617 3.524 0.755 - - - 0.971 0.650 0.783 0.365 Cystathionine Beta-Synthase [Source:RefSeq peptide;Acc:NP_494215]
60. F45E12.6 F45E12.6 427 3.513 0.740 - - - 0.958 0.647 0.799 0.369
61. R02D5.9 R02D5.9 0 3.513 0.729 - - - 0.963 0.637 0.803 0.381
62. C47D12.3 sfxn-1.4 1105 3.51 0.744 - - - 0.973 0.640 0.790 0.363 SideroFleXiN (mitochondrial iron transporter) [Source:RefSeq peptide;Acc:NP_001254309]
63. F12A10.4 nep-5 324 3.51 0.749 - - - 0.974 0.613 0.803 0.371 NEPrilysin metallopeptidase family [Source:RefSeq peptide;Acc:NP_495044]
64. Y116A8C.25 Y116A8C.25 0 3.506 0.773 - - - 0.968 0.654 0.745 0.366
65. C38C3.3 C38C3.3 2036 3.506 0.721 - - - 0.950 0.620 0.760 0.455
66. C53A5.4 tag-191 712 3.505 0.719 - - - 0.960 0.645 0.784 0.397
67. R06B10.2 R06B10.2 245 3.5 0.809 - - - 0.950 0.596 0.782 0.363 Protein-tyrosine-phosphatase [Source:RefSeq peptide;Acc:NP_497309]
68. H20J04.4 H20J04.4 388 3.488 0.733 - - - 0.980 0.643 0.786 0.346
69. T25B9.3 T25B9.3 0 3.482 0.734 - - - 0.967 0.622 0.788 0.371
70. F36H5.4 F36H5.4 0 3.48 0.708 - - - 0.970 0.642 0.812 0.348
71. Y66D12A.20 spe-6 1190 3.479 0.755 - - - 0.964 0.628 0.768 0.364 Probable serine/threonine-protein kinase spe-6 [Source:UniProtKB/Swiss-Prot;Acc:Q95PZ9]
72. Y62E10A.20 Y62E10A.20 0 3.475 0.720 - - - 0.962 0.643 0.768 0.382
73. Y57G11B.8 Y57G11B.8 0 3.467 0.779 - - - 0.952 0.646 0.732 0.358
74. Y75B7B.2 Y75B7B.2 77 3.46 0.715 - - - 0.971 0.644 0.759 0.371
75. ZK488.5 ZK488.5 0 3.455 0.703 - - - 0.981 0.654 0.769 0.348
76. Y38F1A.4 Y38F1A.4 0 3.455 - - - - 0.912 0.819 0.774 0.950
77. C47E8.3 C47E8.3 0 3.455 0.738 - - - 0.952 0.643 0.773 0.349
78. W03G1.5 W03G1.5 249 3.454 0.699 - - - 0.974 0.646 0.774 0.361
79. C29E6.3 pph-2 1117 3.449 0.723 - - - 0.955 0.633 0.771 0.367
80. F02E11.1 wht-4 714 3.448 0.734 - - - 0.960 0.636 0.750 0.368 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_494495]
81. Y50E8A.11 Y50E8A.11 0 3.448 0.689 - - - 0.950 0.637 0.815 0.357
82. K07A3.3 K07A3.3 1137 3.446 0.700 - - - 0.958 0.617 0.801 0.370
83. C29F5.5 C29F5.5 0 3.444 0.699 - - - 0.954 0.654 0.783 0.354
84. K07F5.4 kin-24 655 3.442 0.716 - - - 0.987 0.652 0.737 0.350 Tyrosine-protein kinase [Source:RefSeq peptide;Acc:NP_501761]
85. F47B3.7 F47B3.7 1872 3.442 0.731 - - - 0.955 0.633 0.757 0.366 Protein-tyrosine-phosphatase [Source:RefSeq peptide;Acc:NP_491276]
86. Y50E8A.14 Y50E8A.14 0 3.441 0.762 - - - 0.953 0.631 0.731 0.364
87. T28C12.3 fbxa-202 545 3.441 0.661 - - - 0.958 0.656 0.798 0.368 F-box A protein [Source:RefSeq peptide;Acc:NP_504615]
88. ZK1098.9 ZK1098.9 1265 3.438 0.729 - - - 0.975 0.642 0.711 0.381
89. W03F8.2 W03F8.2 261 3.43 0.732 - - - 0.965 0.630 0.763 0.340
90. T01H8.2 T01H8.2 0 3.429 0.684 - - - 0.975 0.655 0.756 0.359
91. F56H11.3 elo-7 1425 3.426 0.694 - - - 0.957 0.647 0.749 0.379 Elongation of very long chain fatty acids protein [Source:RefSeq peptide;Acc:NP_001255397]
92. F59A7.9 cysl-4 322 3.423 0.663 - - - 0.952 0.631 0.801 0.376 Cysteine synthase [Source:RefSeq peptide;Acc:NP_503547]
93. F35C11.3 F35C11.3 966 3.422 0.727 - - - 0.963 0.632 0.734 0.366
94. F10G8.2 F10G8.2 409 3.419 0.696 - - - 0.957 0.643 0.758 0.365
95. Y54F10BM.6 Y54F10BM.6 0 3.418 0.697 - - - 0.965 0.659 0.714 0.383
96. R03D7.8 R03D7.8 343 3.416 0.704 - - - 0.957 0.653 0.742 0.360
97. F38A5.11 irld-7 263 3.415 0.750 - - - 0.959 0.616 0.735 0.355 Insulin/EGF-Receptor L Domain protein [Source:RefSeq peptide;Acc:NP_501009]
98. C18H9.1 C18H9.1 0 3.412 0.689 - - - 0.977 0.641 0.758 0.347
99. R13D7.2 R13D7.2 1100 3.394 0.704 -0.040 - -0.040 0.956 0.645 0.804 0.365
100. F28D1.8 oig-7 640 3.381 0.696 - - - 0.955 0.637 0.718 0.375

There are 20 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA