C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for W04C9.2

Gene ID Gene Name Reads Transcripts Annotation
W04C9.2 W04C9.2 10941 W04C9.2

Genes with expression patterns similar to W04C9.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. W04C9.2 W04C9.2 10941 2 - 1.000 - 1.000 - - - -
2. F47G9.1 F47G9.1 15924 1.922 - 0.961 - 0.961 - - - -
3. T22D1.4 ribo-1 11776 1.922 - 0.961 - 0.961 - - - - Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH4]
4. Y105E8B.8 ero-1 9366 1.922 - 0.961 - 0.961 - - - - Endoplasmic reticulum oxidoreductin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q7YTU4]
5. Y57E12AM.1 Y57E12AM.1 10510 1.922 - 0.961 - 0.961 - - - - Transmembrane protein 258 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q965T1]
6. T09E8.3 cni-1 13269 1.92 - 0.960 - 0.960 - - - - Protein cornichon homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22361]
7. Y63D3A.6 dnj-29 11593 1.92 - 0.960 - 0.960 - - - - DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_493463]
8. Y57G11C.10 gdi-1 38397 1.918 - 0.959 - 0.959 - - - - GDI (RabGDP Dissociation Inhibitor) family [Source:RefSeq peptide;Acc:NP_001041043]
9. C07G2.2 atf-7 17768 1.918 - 0.959 - 0.959 - - - - ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_497914]
10. K11D9.2 sca-1 71133 1.914 - 0.957 - 0.957 - - - - Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
11. F43E2.7 mtch-1 30689 1.914 - 0.957 - 0.957 - - - - MiTochondrial Carrier Homolog [Source:RefSeq peptide;Acc:NP_871994]
12. F36H1.2 kdin-1 6118 1.912 - 0.956 - 0.956 - - - - KiDINs220 (vertebrate scaffold protein) homolog [Source:RefSeq peptide;Acc:NP_001040942]
13. M106.5 cap-2 11395 1.912 - 0.956 - 0.956 - - - - F-actin-capping protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:P34686]
14. Y56A3A.21 trap-4 58702 1.908 - 0.954 - 0.954 - - - - TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
15. C32F10.8 C32F10.8 24073 1.908 - 0.954 - 0.954 - - - -
16. F29F11.6 gsp-1 27907 1.906 - 0.953 - 0.953 - - - - Serine/threonine-protein phosphatase PP1-alpha [Source:UniProtKB/Swiss-Prot;Acc:Q27497]
17. B0511.10 eif-3.E 10041 1.904 - 0.952 - 0.952 - - - - Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
18. F49E8.3 pam-1 25149 1.904 - 0.952 - 0.952 - - - -
19. F46A9.5 skr-1 31598 1.904 - 0.952 - 0.952 - - - - Skp1-related protein [Source:UniProtKB/Swiss-Prot;Acc:G5ECU1]
20. Y48C3A.10 mrpl-20 2667 1.904 - 0.952 - 0.952 - - - - Mitochondrial Ribosomal Protein, Large [Source:RefSeq peptide;Acc:NP_496817]
21. F21D5.7 F21D5.7 9753 1.904 - 0.952 - 0.952 - - - -
22. Y39E4B.12 gly-5 13353 1.904 - 0.952 - 0.952 - - - - Polypeptide N-acetylgalactosaminyltransferase 5 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZJ1]
23. F53F10.4 unc-108 41213 1.904 - 0.952 - 0.952 - - - - Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
24. B0336.2 arf-1.2 45317 1.902 - 0.951 - 0.951 - - - - ADP-ribosylation factor 1-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q10943]
25. C26E6.3 ntl-9 1967 1.902 - 0.951 - 0.951 - - - - NOT-Like (yeast CCR4/NOT complex component) [Source:RefSeq peptide;Acc:NP_498048]
26. Y71F9AL.9 Y71F9AL.9 46564 1.9 - 0.950 - 0.950 - - - -

Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA