C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for VF11C1L.1

Gene ID Gene Name Reads Transcripts Annotation
VF11C1L.1 ppk-3 944 VF11C1L.1 PIP Kinase [Source:RefSeq peptide;Acc:NP_510155]

Genes with expression patterns similar to VF11C1L.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. VF11C1L.1 ppk-3 944 6 1.000 1.000 1.000 1.000 1.000 1.000 - - PIP Kinase [Source:RefSeq peptide;Acc:NP_510155]
2. F13B9.8 fis-2 2392 5.162 0.871 0.869 0.820 0.869 0.774 0.959 - - S. cerevisiae FIS1-related [Source:RefSeq peptide;Acc:NP_001024559]
3. T04C10.2 epn-1 7689 5.135 0.756 0.906 0.905 0.906 0.711 0.951 - - EPsiN (endocytic protein) homolog [Source:RefSeq peptide;Acc:NP_510459]
4. R04A9.4 ife-2 3282 5.105 0.783 0.883 0.846 0.883 0.753 0.957 - - Eukaryotic translation initiation factor 4E-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21693]
5. D1005.1 acly-1 8877 5.042 0.820 0.910 0.908 0.910 0.543 0.951 - - Probable ATP-citrate synthase [Source:UniProtKB/Swiss-Prot;Acc:P53585]
6. T01C8.1 aak-2 5650 5.008 0.811 0.916 0.815 0.916 0.600 0.950 - - 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZQ4]
7. K09A9.2 rab-14 5898 4.936 0.668 0.895 0.837 0.895 0.687 0.954 - - RAB family [Source:RefSeq peptide;Acc:NP_510572]
8. F20D1.10 emre-1 14750 4.886 0.702 0.861 0.832 0.861 0.660 0.970 - - Essential Mitochondrial calcium uniporter (MCU) REgulator [Source:RefSeq peptide;Acc:NP_510487]
9. C34E11.1 rsd-3 5846 4.87 0.815 0.818 0.744 0.818 0.714 0.961 - -
10. H13N06.5 hke-4.2 2888 4.748 0.751 0.893 0.655 0.893 0.601 0.955 - - Histidine-rich membrane protein KE4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTQ7]
11. M02A10.3 sli-1 2276 4.737 0.702 0.885 0.766 0.885 0.537 0.962 - - Suppressor of LIneage defect [Source:RefSeq peptide;Acc:NP_508145]
12. R03E1.1 sym-4 2393 4.675 0.627 0.836 0.762 0.836 0.659 0.955 - - SYM-4; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEV4]
13. F08G12.4 vhl-1 1124 4.665 0.689 0.813 0.880 0.813 0.515 0.955 - - Von Hippel-Lindau tumor suppressor homolog [Source:UniProtKB/Swiss-Prot;Acc:Q19213]
14. C43G2.2 bicd-1 6426 4.536 0.576 0.818 0.706 0.818 0.662 0.956 - - BICaudal D (Drosophila) homolog [Source:RefSeq peptide;Acc:NP_001293734]
15. F26D10.9 atgp-1 3623 4.51 0.813 0.728 0.754 0.728 0.535 0.952 - - Amino acid Transporter GlycoProtein subunit [Source:RefSeq peptide;Acc:NP_503064]
16. F26D11.11 let-413 2603 4.498 0.655 0.843 0.757 0.843 0.445 0.955 - -
17. Y105C5B.21 jac-1 2833 4.472 0.528 0.761 0.822 0.761 0.645 0.955 - - Juxtamembrane domain-associated catenin [Source:UniProtKB/Swiss-Prot;Acc:Q9U308]
18. B0563.4 tmbi-4 7067 4.418 0.524 0.813 0.636 0.813 0.671 0.961 - - Transmembrane BAX inhibitor motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q11080]
19. Y38C1AB.4 frm-5.2 2653 4.396 0.865 0.864 0.835 0.864 - 0.968 - - FERM domain (protein4.1-ezrin-radixin-moesin) family [Source:RefSeq peptide;Acc:NP_499850]
20. C44C8.6 mak-2 2844 4.352 0.667 0.713 0.615 0.713 0.692 0.952 - - MAP kinase Activated protein Kinase [Source:RefSeq peptide;Acc:NP_500006]
21. C18B2.5 C18B2.5 5374 4.148 0.665 0.582 0.677 0.582 0.676 0.966 - -
22. K08A8.3 coh-1 732 4.133 0.774 0.827 0.755 0.827 - 0.950 - - COHesin family [Source:RefSeq peptide;Acc:NP_509262]
23. F25H2.2 snx-27 2165 4.122 - 0.804 0.832 0.804 0.728 0.954 - - Sorting NeXin [Source:RefSeq peptide;Acc:NP_492758]
24. F18H3.3 pab-2 34007 4.115 0.505 0.671 0.706 0.671 0.606 0.956 - - Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_510259]
25. ZK1321.3 aqp-10 3813 4.079 0.546 0.761 0.420 0.761 0.641 0.950 - - Putative aquaporin-10 [Source:UniProtKB/Swiss-Prot;Acc:Q09369]
26. T04C9.6 frm-2 2486 4.066 0.653 0.715 0.550 0.715 0.478 0.955 - - FERM domain (protein4.1-ezrin-radixin-moesin) family [Source:RefSeq peptide;Acc:NP_001040869]
27. Y39A3CL.5 clp-4 3484 4.047 0.341 0.779 0.597 0.779 0.595 0.956 - - CaLPain family [Source:RefSeq peptide;Acc:NP_497460]
28. K02A4.1 bcat-1 43705 4.026 0.470 0.782 0.578 0.782 0.462 0.952 - - Branched-chain-amino-acid aminotransferase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P54688]
29. F17H10.1 F17H10.1 2677 3.922 0.689 0.717 0.842 0.717 - 0.957 - -
30. C42D4.6 skr-16 1098 3.874 0.548 0.820 0.735 0.820 - 0.951 - - SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_501128]
31. C36E6.2 C36E6.2 2280 3.868 0.742 0.797 0.574 0.797 - 0.958 - -
32. D1043.1 D1043.1 1595 3.806 0.700 0.663 0.830 0.663 - 0.950 - -
33. F54C9.1 iff-2 63995 3.779 0.492 0.607 0.477 0.607 0.645 0.951 - - Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
34. F02A9.2 far-1 119216 3.74 0.429 0.615 0.527 0.615 0.596 0.958 - - Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
35. E01A2.1 E01A2.1 4875 3.689 0.430 0.699 0.300 0.699 0.605 0.956 - -
36. R09F10.4 inx-5 7528 3.675 0.514 0.625 0.255 0.625 0.692 0.964 - - Innexin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q23027]
37. R03G5.1 eef-1A.2 15061 3.674 0.528 0.593 0.380 0.593 0.607 0.973 - - Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
38. F55D10.2 rpl-25.1 95984 3.632 0.468 0.584 0.423 0.584 0.621 0.952 - - 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
39. B0416.6 gly-13 1256 3.632 0.672 0.776 0.444 0.776 - 0.964 - - Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q11068]
40. F45E6.2 atf-6 426 3.511 - 0.880 0.801 0.880 - 0.950 - - ATF (cAMP-dependent transcription factor) family [Source:RefSeq peptide;Acc:NP_510094]
41. F28A10.6 acdh-9 5255 3.51 0.532 0.549 0.453 0.549 0.474 0.953 - - Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_493832]
42. T27D12.2 clh-1 6001 3.491 0.378 0.574 0.504 0.574 0.509 0.952 - - Chloride channel protein [Source:RefSeq peptide;Acc:NP_001022373]
43. K01A2.8 mps-2 10994 3.487 0.481 0.527 0.531 0.527 0.467 0.954 - - MiRP K channel accessory Subunit [Source:RefSeq peptide;Acc:NP_493704]
44. F07A5.7 unc-15 276610 3.452 0.403 0.539 0.526 0.539 0.492 0.953 - - Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
45. T25F10.6 clik-1 175948 3.419 0.450 0.460 0.583 0.460 0.511 0.955 - - CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
46. Y8G1A.2 inx-13 9263 3.4 0.481 0.526 0.331 0.526 0.581 0.955 - - Innexin [Source:RefSeq peptide;Acc:NP_491212]
47. K12F2.2 vab-8 2904 3.378 0.431 0.588 0.338 0.588 0.478 0.955 - - Kinesin-like protein vab-8 [Source:UniProtKB/Swiss-Prot;Acc:Q21441]
48. R148.6 heh-1 40904 3.352 0.462 0.469 0.429 0.469 0.568 0.955 - - Putative protein heh-1 [Source:UniProtKB/Swiss-Prot;Acc:O17271]
49. F02E8.3 aps-2 545 3.269 0.774 0.771 - 0.771 - 0.953 - - AdaPtin, Small chain (clathrin associated complex) [Source:RefSeq peptide;Acc:NP_508767]
50. F44G3.6 skr-3 4887 3.262 0.558 0.342 0.391 0.342 0.678 0.951 - - SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_507059]
51. B0416.7 B0416.7 852 3.254 0.793 - 0.804 - 0.683 0.974 - -
52. F20D1.3 F20D1.3 0 3.244 0.776 - 0.827 - 0.691 0.950 - -
53. C05E11.1 lnp-1 457 3.221 0.691 0.789 - 0.789 - 0.952 - -
54. Y73B6BR.1 pqn-89 2678 3.214 - 0.586 0.421 0.586 0.653 0.968 - - Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_001023577]
55. F13B9.2 F13B9.2 0 3.177 0.772 - 0.730 - 0.721 0.954 - -
56. T22G5.2 lbp-7 1804 3.152 0.414 0.308 0.605 0.308 0.558 0.959 - - Fatty acid-binding protein homolog 7 [Source:UniProtKB/Swiss-Prot;Acc:O02323]
57. K08F8.4 pah-1 5114 3.145 0.344 0.546 0.294 0.546 0.461 0.954 - - Probable phenylalanine-4-hydroxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:P90925]
58. W04G3.7 W04G3.7 0 3.144 0.734 - 0.757 - 0.696 0.957 - -
59. C03A3.3 C03A3.3 0 3.112 0.778 - 0.819 - 0.548 0.967 - -
60. F13E6.2 F13E6.2 0 3.088 0.810 - 0.643 - 0.666 0.969 - -
61. C35C5.8 C35C5.8 0 3.086 0.743 - 0.786 - 0.601 0.956 - -
62. F11A1.3 daf-12 3458 3.055 0.404 0.300 0.559 0.300 0.537 0.955 - - Nuclear hormone receptor family member daf-12 [Source:UniProtKB/Swiss-Prot;Acc:G5EFF5]
63. Y37E11AR.2 siah-1 2087 3.04 - 0.796 - 0.796 0.490 0.958 - - E3 ubiquitin-protein ligase siah-1 [Source:UniProtKB/Swiss-Prot;Acc:Q965X6]
64. F10E9.6 mig-10 2590 3.007 - 0.520 0.488 0.520 0.519 0.960 - - Abnormal cell migration protein 10 [Source:UniProtKB/Swiss-Prot;Acc:P34400]
65. M163.5 M163.5 0 2.751 0.573 - 0.548 - 0.668 0.962 - -
66. F34H10.4 F34H10.4 0 2.743 0.597 - 0.617 - 0.565 0.964 - -
67. Y72A10A.1 Y72A10A.1 1863 2.741 0.542 - 0.654 - 0.586 0.959 - -
68. Y18D10A.9 Y18D10A.9 628 2.695 0.111 0.672 0.163 0.672 0.122 0.955 - - Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XW12]
69. C06A6.7 C06A6.7 560 2.691 0.591 - 0.499 - 0.641 0.960 - -
70. T12G3.1 sqst-1 3296 2.597 - 0.479 - 0.479 0.687 0.952 - - SeQueSTosome related [Source:RefSeq peptide;Acc:NP_001255608]
71. C03G6.19 srp-6 5642 2.569 0.377 0.212 0.247 0.212 0.557 0.964 - - SeRPin [Source:RefSeq peptide;Acc:NP_504890]
72. C44C1.2 chil-10 306 2.527 - 0.787 - 0.787 - 0.953 - - CHItinase-Like [Source:RefSeq peptide;Acc:NP_508185]
73. W10G6.3 mua-6 8806 2.474 0.164 0.246 0.287 0.246 0.573 0.958 - - Intermediate filament protein ifa-2 [Source:UniProtKB/Swiss-Prot;Acc:O02365]
74. Y37D8A.17 Y37D8A.17 0 2.467 0.455 - 0.300 - 0.759 0.953 - - Transmembrane protein 33 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWV0]
75. F15E6.2 lgc-22 4632 2.454 0.291 0.308 -0.016 0.308 0.604 0.959 - - Ligand-Gated ion Channel [Source:RefSeq peptide;Acc:NP_001255260]
76. M4.1 M4.1 8703 2.425 - 0.736 - 0.736 - 0.953 - -
77. Y40B10A.2 comt-3 1759 2.42 0.431 - 0.457 - 0.581 0.951 - - Catechol-O-MethylTransferase family [Source:RefSeq peptide;Acc:NP_503560]
78. R148.7 R148.7 1688 2.418 0.347 - 0.545 - 0.556 0.970 - -
79. C35B1.7 C35B1.7 264 2.384 0.451 - 0.270 - 0.704 0.959 - -
80. F17C11.6 F17C11.6 1375 2.293 0.691 - 0.652 - - 0.950 - -
81. F14B8.2 sid-5 1209 2.232 0.658 - - - 0.622 0.952 - - Systemic RNA interference defective protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q19443]
82. T13F3.7 T13F3.7 397 2.181 0.394 - 0.304 - 0.525 0.958 - -
83. F25E5.9 F25E5.9 0 2.149 0.375 - 0.208 - 0.610 0.956 - -
84. T07F8.1 T07F8.1 0 2.107 - - 0.452 - 0.698 0.957 - -
85. K09G1.2 K09G1.2 1161 2.069 0.327 - 0.238 - 0.552 0.952 - -
86. F21C10.11 F21C10.11 962 2.025 0.528 - - - 0.545 0.952 - -
87. F42H11.1 F42H11.1 1245 1.953 0.377 - 0.618 - - 0.958 - -
88. D1081.10 D1081.10 172 1.893 0.360 - - - 0.560 0.973 - -
89. F01G10.8 daf-14 1458 1.742 - - 0.786 - - 0.956 - - Smad protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEP2]
90. F14E5.5 lips-10 1905 1.633 - - - - 0.681 0.952 - - LIPaSe related [Source:RefSeq peptide;Acc:NP_495777]
91. C04A11.1 C04A11.1 228 1.582 0.622 - - - - 0.960 - -
92. F53C3.1 F53C3.1 659 1.529 - - 0.151 - 0.426 0.952 - -
93. F14H12.4 cst-1 481 1.529 0.575 - - - - 0.954 - - Serine/threonine-protein kinase cst-1 Serine/threonine-protein kinase cst-1 37kDa subunit Serine/threonine-protein kinase cst-1 18kDa subunit [Source:UniProtKB/Swiss-Prot;Acc:Q9NB31]
94. F11D5.5 F11D5.5 0 1.498 0.250 - - - 0.285 0.963 - -
95. F19H6.1 nekl-3 258 1.495 - - - - 0.542 0.953 - - Serine/threonine-protein kinase nekl-3 [Source:UniProtKB/Swiss-Prot;Acc:G5EFM9]
96. F57B1.6 F57B1.6 0 1.49 - - - - 0.539 0.951 - -
97. ZK909.6 ZK909.6 789 1.463 - - - - 0.480 0.983 - - CES-2 region pioneer [Source:UniProtKB/TrEMBL;Acc:Q94127]
98. F56E3.3 klp-4 1827 1.456 - - - - 0.503 0.953 - - Kinesin-like protein [Source:RefSeq peptide;Acc:NP_741745]
99. K01B6.1 fozi-1 358 1.385 - - - - 0.429 0.956 - - Formin-homology and zinc finger domains protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34489]
100. K01A12.2 K01A12.2 0 0.96 - - - - - 0.960 - -

There are 2 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA