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Results for R31.1

Gene ID Gene Name Reads Transcripts Annotation
R31.1 sma-1 5559 R31.1a, R31.1b, R31.1c, R31.1d SMAll [Source:RefSeq peptide;Acc:NP_741632]

Genes with expression patterns similar to R31.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R31.1 sma-1 5559 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 SMAll [Source:RefSeq peptide;Acc:NP_741632]
2. T22A3.3 lst-1 10728 6.615 0.806 0.716 0.658 0.716 0.976 0.935 0.933 0.875 Lateral Signaling Target [Source:RefSeq peptide;Acc:NP_001021628]
3. C50F4.14 nstp-10 4932 6.55 0.825 0.679 0.707 0.679 0.946 0.952 0.889 0.873 GDP-fucose transporter [Source:UniProtKB/Swiss-Prot;Acc:Q968A5]
4. K07A1.8 ile-1 16218 6.497 0.848 0.675 0.690 0.675 0.933 0.966 0.889 0.821 Intracellular LEctin [Source:RefSeq peptide;Acc:NP_492548]
5. F32B6.8 tbc-3 9252 6.466 0.740 0.677 0.678 0.677 0.945 0.963 0.903 0.883 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
6. F49E11.1 mbk-2 30367 6.445 0.832 0.676 0.689 0.676 0.905 0.950 0.833 0.884 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
7. C24F3.1 tram-1 21190 6.362 0.800 0.671 0.685 0.671 0.958 0.960 0.841 0.776 Translocating chain-associated membrane protein [Source:RefSeq peptide;Acc:NP_501869]
8. K10B2.1 lin-23 15896 6.351 0.798 0.629 0.663 0.629 0.907 0.950 0.861 0.914 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
9. F12F6.6 sec-24.1 10754 6.334 0.745 0.638 0.681 0.638 0.958 0.932 0.864 0.878 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_502178]
10. ZK353.7 cutc-1 5788 6.317 0.819 0.627 0.679 0.627 0.919 0.960 0.825 0.861 Copper homeostasis protein cutC homolog [Source:UniProtKB/Swiss-Prot;Acc:P34630]
11. C02F4.1 ced-5 9096 6.308 0.735 0.579 0.699 0.579 0.916 0.969 0.913 0.918 CED-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEN3]
12. ZK632.7 panl-3 5387 6.294 0.824 0.653 0.666 0.653 0.934 0.958 0.784 0.822 PAB-dependent poly(A)-specific ribonuclease subunit PAN3 [Source:UniProtKB/Swiss-Prot;Acc:P34653]
13. K10B2.5 ani-2 11397 6.288 0.722 0.641 0.683 0.641 0.950 0.925 0.893 0.833 Anillin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09994]
14. ZK20.3 rad-23 35070 6.274 0.787 0.617 0.665 0.617 0.925 0.952 0.834 0.877
15. D1022.7 aka-1 10681 6.249 0.737 0.586 0.684 0.586 0.920 0.950 0.866 0.920 A Kinase Anchor protein [Source:RefSeq peptide;Acc:NP_001022045]
16. F59E10.3 copz-1 5962 6.237 0.825 0.650 0.637 0.650 0.957 0.853 0.831 0.834 Probable coatomer subunit zeta [Source:UniProtKB/Swiss-Prot;Acc:O17901]
17. C02F5.9 pbs-6 20120 6.21 0.795 0.576 0.653 0.576 0.929 0.954 0.855 0.872 Proteasome subunit beta type-1 [Source:UniProtKB/Swiss-Prot;Acc:P34286]
18. T07E3.4 T07E3.4 4129 6.209 0.840 0.553 0.667 0.553 0.921 0.955 0.802 0.918
19. ZK858.7 ZK858.7 2817 6.208 0.840 0.585 0.661 0.585 0.923 0.955 0.811 0.848
20. C13B4.2 usp-14 9000 6.174 0.770 0.596 0.691 0.596 0.874 0.952 0.821 0.874 Ubiquitin carboxyl-terminal hydrolase 14 [Source:UniProtKB/Swiss-Prot;Acc:Q17361]
21. F49E8.3 pam-1 25149 6.162 0.812 0.552 0.648 0.552 0.919 0.950 0.855 0.874
22. ZK353.8 ubxn-4 6411 6.16 0.808 0.555 0.667 0.555 0.924 0.958 0.830 0.863 UBX domain-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:P34631]
23. C30C11.2 rpn-3 14437 6.159 0.771 0.592 0.674 0.592 0.909 0.952 0.799 0.870 26S proteasome non-ATPase regulatory subunit 3 [Source:UniProtKB/Swiss-Prot;Acc:Q04908]
24. ZK287.5 rbx-1 13546 6.151 0.779 0.566 0.679 0.566 0.896 0.952 0.814 0.899 RING-box protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q23457]
25. W09D10.2 tat-3 11820 6.11 0.734 0.558 0.606 0.558 0.960 0.944 0.885 0.865 Phospholipid-transporting ATPase [Source:RefSeq peptide;Acc:NP_499363]
26. F23F1.8 rpt-4 14303 6.102 0.753 0.563 0.622 0.563 0.921 0.956 0.866 0.858 Probable 26S protease regulatory subunit 10B [Source:UniProtKB/Swiss-Prot;Acc:O17071]
27. F26H11.1 kbp-3 4177 6.082 0.789 0.584 0.624 0.584 0.951 0.879 0.850 0.821 Kinetochore-binding protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O45406]
28. F37C12.7 acs-4 25192 6.077 0.760 0.530 0.685 0.530 0.946 0.953 0.804 0.869 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_498568]
29. Y17G7B.2 ash-2 5452 6.073 0.696 0.629 0.639 0.629 0.951 0.943 0.823 0.763 ASH histone methyltransferase complex subunit (Drosophila absent, small or homeotic discs) [Source:RefSeq peptide;Acc:NP_496555]
30. F52E1.10 vha-18 3090 6.05 0.697 0.569 0.670 0.569 0.950 0.908 0.865 0.822 Probable V-type proton ATPase subunit H 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20666]
31. D2045.1 atx-2 6183 6.029 0.713 0.543 0.665 0.543 0.909 0.961 0.814 0.881 human ATX (ataxin) related [Source:RefSeq peptide;Acc:NP_001021230]
32. Y76A2B.1 pod-1 12528 6.021 0.710 0.519 0.624 0.519 0.914 0.953 0.880 0.902 POD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDS2]
33. F32D1.2 hpo-18 33234 6.002 0.755 0.629 0.559 0.629 0.874 0.951 0.737 0.868
34. F29G9.3 aps-1 3770 5.947 0.616 0.575 0.610 0.575 0.908 0.954 0.808 0.901 AdaPtin, Small chain (clathrin associated complex) [Source:RefSeq peptide;Acc:NP_504559]
35. T14G10.7 hpo-5 3021 5.945 0.669 0.597 0.670 0.597 0.954 0.914 0.770 0.774
36. T24B8.2 T24B8.2 2167 5.89 0.668 0.509 0.565 0.509 0.919 0.957 0.824 0.939
37. C43E11.11 cogc-5 2322 5.867 0.728 0.580 0.627 0.580 0.894 0.951 0.804 0.703 Conserved Oligomeric Golgi (COG) Component [Source:RefSeq peptide;Acc:NP_491339]
38. R07E5.2 prdx-3 6705 5.737 0.687 0.483 0.507 0.483 0.955 0.899 0.868 0.855 Probable peroxiredoxin prdx-3 [Source:UniProtKB/Swiss-Prot;Acc:Q21824]
39. M110.4 ifg-1 25579 5.698 0.657 0.466 0.574 0.466 0.859 0.953 0.856 0.867 Initiation Factor 4G (eIF4G) family [Source:RefSeq peptide;Acc:NP_001129819]
40. R01H2.5 ger-1 3456 5.618 0.534 0.646 0.424 0.646 0.959 0.901 0.816 0.692 GDP-keto-6-deoxymannose 3,5-Epimerase/4-Reductase [Source:RefSeq peptide;Acc:NP_498540]
41. F11A10.7 F11A10.7 3851 5.516 0.798 0.359 0.609 0.359 0.876 0.953 0.798 0.764
42. F44E7.4 F44E7.4 11577 5.506 0.694 0.635 - 0.635 0.953 0.891 0.914 0.784
43. F59B1.2 F59B1.2 9993 5.461 0.620 0.396 0.460 0.396 0.973 0.941 0.859 0.816
44. Y105E8A.13 Y105E8A.13 8720 5.304 0.777 0.430 0.517 0.430 0.952 0.835 0.585 0.778
45. F23F1.6 F23F1.6 717 5.15 0.826 0.087 0.589 0.087 0.958 0.942 0.813 0.848
46. T24C2.2 T24C2.2 84 5.125 0.775 - 0.691 - 0.905 0.956 0.877 0.921
47. Y45G12B.3 Y45G12B.3 0 5.024 0.786 - 0.700 - 0.963 0.910 0.802 0.863 L-2-hydroxyglutarate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9N4Z0]
48. B0361.4 B0361.4 87 4.925 0.771 - 0.669 - 0.883 0.957 0.809 0.836
49. F53H8.4 sms-2 1122 3.584 0.730 0.957 0.766 0.957 - 0.174 - - Phosphatidylcholine:ceramide cholinephosphotransferase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20735]
50. F13C5.2 F13C5.2 2918 3.448 0.713 0.951 0.833 0.951 - - - -
51. F28H6.6 F28H6.6 830 3.31 0.641 0.951 0.767 0.951 - - - -
52. K10B3.5 K10B3.5 533 1.902 - 0.951 - 0.951 - - - -

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA