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Results for F55H2.1

Gene ID Gene Name Reads Transcripts Annotation
F55H2.1 sod-4 3205 F55H2.1a, F55H2.1b Extracellular superoxide dismutase [Cu-Zn] [Source:UniProtKB/Swiss-Prot;Acc:P34461]

Genes with expression patterns similar to F55H2.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F55H2.1 sod-4 3205 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Extracellular superoxide dismutase [Cu-Zn] [Source:UniProtKB/Swiss-Prot;Acc:P34461]
2. F27D9.1 unc-18 5574 5.781 0.772 0.578 0.757 0.578 0.629 0.957 0.701 0.809 Putative acetylcholine regulator unc-18 [Source:UniProtKB/Swiss-Prot;Acc:P34815]
3. Y39A3CL.5 clp-4 3484 5.656 0.613 0.633 0.742 0.633 0.698 0.961 0.669 0.707 CaLPain family [Source:RefSeq peptide;Acc:NP_497460]
4. C43H6.1 trpp-12 4424 5.588 0.702 0.596 0.570 0.596 0.585 0.950 0.748 0.841 TRansport Protein Particle [Source:RefSeq peptide;Acc:NP_508439]
5. F09B9.2 unc-115 18081 5.486 0.663 0.473 0.707 0.473 0.658 0.964 0.711 0.837 Putative actin-binding protein UNC-115 [Source:UniProtKB/TrEMBL;Acc:O77133]
6. B0563.4 tmbi-4 7067 5.478 0.651 0.549 0.760 0.549 0.558 0.956 0.674 0.781 Transmembrane BAX inhibitor motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q11080]
7. T23B3.5 T23B3.5 22135 5.468 0.334 0.738 0.659 0.738 0.330 0.952 0.883 0.834
8. Y8G1A.2 inx-13 9263 5.458 0.577 0.519 0.508 0.519 0.760 0.953 0.817 0.805 Innexin [Source:RefSeq peptide;Acc:NP_491212]
9. R03G5.1 eef-1A.2 15061 5.442 0.736 0.508 0.700 0.508 0.537 0.965 0.720 0.768 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
10. F25H2.2 snx-27 2165 5.176 - 0.656 0.615 0.656 0.633 0.954 0.820 0.842 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492758]
11. M02A10.3 sli-1 2276 4.968 0.520 0.520 0.242 0.520 0.804 0.991 0.717 0.654 Suppressor of LIneage defect [Source:RefSeq peptide;Acc:NP_508145]
12. Y18D10A.9 Y18D10A.9 628 4.957 0.263 0.650 0.514 0.650 0.546 0.970 0.648 0.716 Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XW12]
13. D1005.1 acly-1 8877 4.796 0.445 0.531 0.447 0.531 0.407 0.957 0.641 0.837 Probable ATP-citrate synthase [Source:UniProtKB/Swiss-Prot;Acc:P53585]
14. K09A9.2 rab-14 5898 4.753 0.238 0.494 0.323 0.494 0.777 0.970 0.596 0.861 RAB family [Source:RefSeq peptide;Acc:NP_510572]
15. T25G12.4 rab-6.2 2867 4.75 0.262 0.515 0.396 0.515 0.617 0.971 0.790 0.684 Ras-related protein Rab-6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q22782]
16. F57C7.2 nhx-5 2495 4.749 0.473 0.457 0.341 0.457 0.663 0.953 0.695 0.710 Sodium/hydrogen exchanger [Source:RefSeq peptide;Acc:NP_001024720]
17. C03G6.19 srp-6 5642 4.634 0.519 0.251 0.557 0.251 0.581 0.963 0.754 0.758 SeRPin [Source:RefSeq peptide;Acc:NP_504890]
18. F42G2.2 F42G2.2 0 4.427 0.606 - 0.694 - 0.673 0.964 0.721 0.769
19. B0416.7 B0416.7 852 4.273 0.596 - 0.594 - 0.583 0.962 0.733 0.805
20. F13B9.2 F13B9.2 0 4.101 0.486 - 0.682 - 0.421 0.952 0.777 0.783
21. Y71F9AR.1 bam-2 2506 4.058 - 0.352 0.275 0.352 0.604 0.964 0.832 0.679 BAM-2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECL4]
22. Y38C1AB.4 frm-5.2 2653 4.056 0.273 0.408 0.388 0.408 - 0.971 0.829 0.779 FERM domain (protein4.1-ezrin-radixin-moesin) family [Source:RefSeq peptide;Acc:NP_499850]
23. F34H10.4 F34H10.4 0 3.715 0.302 - 0.527 - 0.485 0.950 0.583 0.868
24. C42D4.6 skr-16 1098 3.646 0.252 0.304 0.136 0.304 - 0.960 0.788 0.902 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_501128]
25. H03A11.2 H03A11.2 197 3.451 0.261 - 0.758 - 0.470 0.951 0.406 0.605
26. F14B8.1 nhx-4 1133 3.411 0.698 0.295 0.490 0.295 - 0.975 0.658 - Sodium/hydrogen exchanger [Source:RefSeq peptide;Acc:NP_001024562]
27. F20D1.2 tbc-1 1042 3.343 0.300 0.470 0.583 0.470 - 0.966 - 0.554 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_510485]
28. F42G9.2 cyn-6 1467 3.209 - 0.451 0.533 0.451 - 0.953 - 0.821 Peptidyl-prolyl cis-trans isomerase 6 [Source:UniProtKB/Swiss-Prot;Acc:P52014]
29. ZK909.6 ZK909.6 789 3.077 - - - - 0.659 0.950 0.707 0.761 CES-2 region pioneer [Source:UniProtKB/TrEMBL;Acc:Q94127]
30. F01G10.8 daf-14 1458 2.765 - - 0.485 - - 0.962 0.572 0.746 Smad protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEP2]
31. C18A3.6 rab-3 7110 2.725 - 0.093 0.134 0.093 0.211 0.963 0.557 0.674 Ras-related protein Rab-3 [Source:UniProtKB/Swiss-Prot;Acc:Q94986]
32. F11D5.5 F11D5.5 0 2.584 0.136 - - - 0.709 0.955 0.784 -
33. F15G9.6 F15G9.6 0 2.379 - - 0.245 - 0.049 0.955 0.510 0.620
34. F52E1.2 F52E1.2 982 2.229 0.206 - 0.303 - - 0.952 - 0.768
35. M4.1 M4.1 8703 1.967 - 0.498 - 0.498 - 0.971 - -
36. F26D11.13 F26D11.13 0 0.97 - - - - - 0.970 - -
37. K01A12.2 K01A12.2 0 0.967 - - - - - 0.967 - -
38. T04C10.1 mbk-1 104 0.964 - - - - - 0.964 - - Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8WQL7]
39. T20D4.6 arrd-22 180 0.961 - - - - - 0.961 - - ARRestin Domain protein [Source:RefSeq peptide;Acc:NP_503955]
40. F41B4.4 glr-6 0 0.952 - - - - - 0.952 - - GLutamate Receptor family (AMPA) [Source:RefSeq peptide;Acc:NP_741822]
41. Y46G5A.18 Y46G5A.18 0 0.951 - - - - - 0.951 - -
42. F09E5.14 F09E5.14 2501 0.95 - - - - - 0.950 - -

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA