C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for F20D1.2

Gene ID Gene Name Reads Transcripts Annotation
F20D1.2 tbc-1 1042 F20D1.2 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_510485]

Genes with expression patterns similar to F20D1.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F20D1.2 tbc-1 1042 6 1.000 1.000 1.000 1.000 - 1.000 - 1.000 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_510485]
2. T25G12.4 rab-6.2 2867 5.183 0.844 0.829 0.833 0.829 - 0.980 - 0.868 Ras-related protein Rab-6.2 [Source:UniProtKB/Swiss-Prot;Acc:Q22782]
3. W06A7.3 ret-1 58319 5.128 0.695 0.852 0.952 0.852 - 0.907 - 0.870 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
4. C05D9.1 snx-1 3578 5.054 0.872 0.838 0.882 0.838 - 0.966 - 0.658 Sorting NeXin [Source:RefSeq peptide;Acc:NP_508216]
5. K09A9.2 rab-14 5898 5.054 0.846 0.862 0.704 0.862 - 0.956 - 0.824 RAB family [Source:RefSeq peptide;Acc:NP_510572]
6. C34E11.1 rsd-3 5846 5.032 0.780 0.775 0.839 0.775 - 0.972 - 0.891
7. H13N06.5 hke-4.2 2888 5.028 0.711 0.840 0.810 0.840 - 0.956 - 0.871 Histidine-rich membrane protein KE4 homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTQ7]
8. Y38C1AB.4 frm-5.2 2653 5.02 0.825 0.785 0.839 0.785 - 0.971 - 0.815 FERM domain (protein4.1-ezrin-radixin-moesin) family [Source:RefSeq peptide;Acc:NP_499850]
9. M02A10.3 sli-1 2276 4.942 0.828 0.799 0.744 0.799 - 0.963 - 0.809 Suppressor of LIneage defect [Source:RefSeq peptide;Acc:NP_508145]
10. F48E3.3 uggt-1 6543 4.856 0.650 0.823 0.858 0.823 - 0.954 - 0.748 UDP-Glucose Glycoprotein glucosylTransferase [Source:RefSeq peptide;Acc:NP_509268]
11. F44A6.1 nucb-1 9013 4.85 0.649 0.873 0.786 0.873 - 0.954 - 0.715 NUCleoBindin homolog [Source:RefSeq peptide;Acc:NP_741885]
12. T25G12.7 dhs-30 1615 4.821 0.826 0.809 0.768 0.809 - 0.952 - 0.657 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_510793]
13. T04G9.3 ile-2 2224 4.761 0.695 0.711 0.793 0.711 - 0.964 - 0.887 Intracellular LEctin [Source:RefSeq peptide;Acc:NP_508151]
14. F57C7.2 nhx-5 2495 4.734 0.753 0.732 0.763 0.732 - 0.958 - 0.796 Sodium/hydrogen exchanger [Source:RefSeq peptide;Acc:NP_001024720]
15. T04G9.5 trap-2 25251 4.688 0.578 0.794 0.789 0.794 - 0.950 - 0.783 Translocon-associated protein subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q22169]
16. F09B9.3 erd-2 7180 4.579 0.526 0.724 0.824 0.724 - 0.951 - 0.830 ER lumen protein-retaining receptor [Source:UniProtKB/Swiss-Prot;Acc:P48583]
17. B0416.6 gly-13 1256 4.43 0.587 0.687 0.604 0.687 - 0.967 - 0.898 Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q11068]
18. F18H3.3 pab-2 34007 4.339 0.421 0.610 0.794 0.610 - 0.963 - 0.941 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_510259]
19. C44C8.6 mak-2 2844 4.168 0.651 0.619 0.673 0.619 - 0.963 - 0.643 MAP kinase Activated protein Kinase [Source:RefSeq peptide;Acc:NP_500006]
20. C18B2.5 C18B2.5 5374 4.119 0.625 0.429 0.839 0.429 - 0.970 - 0.827
21. Y39A3CL.5 clp-4 3484 3.976 0.299 0.711 0.484 0.711 - 0.962 - 0.809 CaLPain family [Source:RefSeq peptide;Acc:NP_497460]
22. R03G5.1 eef-1A.2 15061 3.955 0.363 0.578 0.649 0.578 - 0.970 - 0.817 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
23. Y18D10A.9 Y18D10A.9 628 3.544 -0.002 0.842 0.216 0.842 - 0.958 - 0.688 Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XW12]
24. B0416.7 B0416.7 852 3.499 0.802 - 0.888 - - 0.952 - 0.857
25. H40L08.3 H40L08.3 0 3.453 0.893 - 0.785 - - 0.960 - 0.815
26. F13B9.2 F13B9.2 0 3.417 0.835 - 0.845 - - 0.974 - 0.763
27. F55H2.1 sod-4 3205 3.343 0.300 0.470 0.583 0.470 - 0.966 - 0.554 Extracellular superoxide dismutase [Cu-Zn] [Source:UniProtKB/Swiss-Prot;Acc:P34461]
28. F52E1.2 F52E1.2 982 3.185 0.785 - 0.796 - - 0.951 - 0.653
29. Y71F9AR.1 bam-2 2506 2.748 - 0.343 0.279 0.343 - 0.969 - 0.814 BAM-2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECL4]
30. F45E10.1 unc-53 2843 2.728 0.368 - 0.469 - - 0.940 - 0.951 Adapter protein unc-53 [Source:UniProtKB/Swiss-Prot;Acc:Q7YSI9]
31. Y37D8A.8 Y37D8A.8 610 2.672 0.457 - 0.594 - - 0.953 - 0.668
32. C15A7.2 C15A7.2 0 2.671 0.251 - 0.551 - - 0.965 - 0.904
33. F44A6.5 F44A6.5 424 2.62 - - 0.735 - - 0.958 - 0.927
34. C06A6.7 C06A6.7 560 2.603 0.600 - 0.762 - - 0.951 - 0.290
35. M4.1 M4.1 8703 2.578 - 0.812 - 0.812 - 0.954 - -
36. K03H1.4 ttr-2 11576 2.544 0.108 0.178 0.202 0.178 - 0.959 - 0.919 Transthyretin-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34500]
37. F28H1.4 F28H1.4 81 2.486 0.788 - 0.734 - - 0.964 - -
38. F08C6.4 sto-1 968 2.421 - 0.575 0.310 0.575 - 0.961 - - Stomatin-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19200]
39. C09B8.3 C09B8.3 0 2.389 - - 0.588 - - 0.955 - 0.846
40. C01F6.5 aly-1 204 2.312 0.601 - 0.734 - - 0.977 - - Ref/ALY RNA export adaptor family [Source:RefSeq peptide;Acc:NP_501588]
41. Y39B6A.7 Y39B6A.7 0 2.184 0.295 - - - - 0.937 - 0.952
42. F15G9.6 F15G9.6 0 1.98 - - 0.089 - - 0.962 - 0.929
43. R09H10.3 R09H10.3 5028 1.972 - 0.511 - 0.511 - 0.950 - - Probable 5-hydroxyisourate hydrolase R09H10.3 [Source:UniProtKB/Swiss-Prot;Acc:Q21882]
44. F48C1.3 F48C1.3 0 1.871 - - - - - 0.953 - 0.918
45. F35E12.6 F35E12.6 9439 1.865 - 0.452 - 0.452 - - - 0.961
46. F56E3.3 klp-4 1827 1.855 - - - - - 0.950 - 0.905 Kinesin-like protein [Source:RefSeq peptide;Acc:NP_741745]
47. ZK909.6 ZK909.6 789 1.855 - - - - - 0.960 - 0.895 CES-2 region pioneer [Source:UniProtKB/TrEMBL;Acc:Q94127]
48. C18A3.6 rab-3 7110 1.675 - -0.022 -0.173 -0.022 - 0.977 - 0.915 Ras-related protein Rab-3 [Source:UniProtKB/Swiss-Prot;Acc:Q94986]
49. C45B2.8 C45B2.8 0 1.636 - - 0.672 - - 0.964 - -
50. C04A11.1 C04A11.1 228 1.477 0.507 - - - - 0.970 - -
51. Y75B7AR.1 Y75B7AR.1 0 1.396 - - - - - 0.444 - 0.952
52. F13G3.3 F13G3.3 0 1.208 - - - - - 0.252 - 0.956 UPF0392 protein F13G3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q19417]
53. F11D5.5 F11D5.5 0 1.092 0.133 - - - - 0.959 - -
54. F41G3.20 F41G3.20 0 0.987 - - - - - 0.987 - -
55. Y46G5A.18 Y46G5A.18 0 0.969 - - - - - 0.969 - -
56. T20H4.2 T20H4.2 844 0.964 - - - - - 0.964 - -
57. T10E10.3 T10E10.3 0 0.96 - - - - - 0.960 - -
58. K01A12.2 K01A12.2 0 0.956 - - - - - 0.956 - -
59. K01B6.1 fozi-1 358 0.956 - - - - - 0.956 - - Formin-homology and zinc finger domains protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34489]
60. F41B4.4 glr-6 0 0.955 - - - - - 0.955 - - GLutamate Receptor family (AMPA) [Source:RefSeq peptide;Acc:NP_741822]
61. C07A9.1 clec-162 302 0.953 - - - - - - - 0.953 C-type lectin domain-containing protein 162 [Source:UniProtKB/Swiss-Prot;Acc:P34312]
62. T02C12.4 T02C12.4 142 0.952 - - - - - 0.952 - -
63. ZK563.1 slcf-2 0 0.952 - - - - - 0.952 - - SoLute Carrier Family [Source:RefSeq peptide;Acc:NP_508586]
64. F39G3.1 ugt-61 209 0.951 - - - - - 0.951 - - UDP-glucuronosyltransferase [Source:RefSeq peptide;Acc:NP_504274]
65. T25B6.5 T25B6.5 0 0.951 - - - - - 0.951 - -
66. T28D6.3 T28D6.3 47674 0.733 - -0.200 0.179 -0.200 - 0.954 - -

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA