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Results for F53E2.1

Gene ID Gene Name Reads Transcripts Annotation
F53E2.1 tag-304 394 F53E2.1a, F53E2.1b.1, F53E2.1b.2

Genes with expression patterns similar to F53E2.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F53E2.1 tag-304 394 4 1.000 1.000 - 1.000 - 1.000 - -
2. K08A8.1 mek-1 7004 3.287 0.781 0.775 - 0.775 - 0.956 - - Dual specificity mitogen-activated protein kinase kinase mek-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21307]
3. C14F11.1 got-2.2 16386 3.234 0.674 0.800 - 0.800 - 0.960 - - Aspartate aminotransferase [Source:RefSeq peptide;Acc:NP_741810]
4. Y60A3A.1 unc-51 5262 3.109 0.820 0.665 - 0.665 - 0.959 - - Serine/threonine-protein kinase unc-51 [Source:UniProtKB/Swiss-Prot;Acc:Q23023]
5. C32D5.9 lgg-1 49139 3.081 0.645 0.734 - 0.734 - 0.968 - -
6. K07A3.1 fbp-1 13261 3.023 0.634 0.719 - 0.719 - 0.951 - - Fructose-1,6-BiPhosphatase [Source:RefSeq peptide;Acc:NP_491004]
7. C29F9.7 pat-4 4885 2.952 0.657 0.670 - 0.670 - 0.955 - - Integrin-linked protein kinase homolog pat-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZC4]
8. T14G11.3 immt-1 12837 2.862 0.529 0.685 - 0.685 - 0.963 - - Inner Membrane of MiTochondria protein homolog [Source:RefSeq peptide;Acc:NP_508475]
9. F08B6.2 gpc-2 29938 2.815 0.497 0.676 - 0.676 - 0.966 - - G Protein, Gamma subunit [Source:RefSeq peptide;Acc:NP_491935]
10. C05G5.4 sucl-1 31709 2.735 0.496 0.643 - 0.643 - 0.953 - - Probable succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53596]
11. F32A11.1 F32A11.1 20166 2.729 0.335 0.713 - 0.713 - 0.968 - -
12. C03G5.1 sdha-1 32426 2.725 0.457 0.659 - 0.659 - 0.950 - - Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09508]
13. C29H12.2 C29H12.2 11018 2.62 0.341 0.660 - 0.660 - 0.959 - -
14. M03F4.7 calu-1 11150 2.583 0.348 0.635 - 0.635 - 0.965 - - CALUmenin (calcium-binding protein) homolog [Source:RefSeq peptide;Acc:NP_001024806]
15. M02F4.8 aqp-7 53179 2.522 0.329 0.617 - 0.617 - 0.959 - - AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_508515]
16. F25H2.2 snx-27 2165 2.38 - 0.713 - 0.713 - 0.954 - - Sorting NeXin [Source:RefSeq peptide;Acc:NP_492758]
17. Y71G12B.11 tln-1 7529 2.373 0.306 0.554 - 0.554 - 0.959 - - TaLiN [Source:RefSeq peptide;Acc:NP_001293439]
18. Y37E11AR.2 siah-1 2087 2.319 - 0.681 - 0.681 - 0.957 - - E3 ubiquitin-protein ligase siah-1 [Source:UniProtKB/Swiss-Prot;Acc:Q965X6]
19. F45E1.6 his-71 6187 2.256 0.436 0.434 - 0.434 - 0.952 - - Histone H3.3 type 1 [Source:UniProtKB/Swiss-Prot;Acc:Q10453]
20. C44B12.2 ost-1 94127 2.246 0.297 0.492 - 0.492 - 0.965 - - SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
21. R07E4.6 kin-2 28939 2.245 0.427 0.434 - 0.434 - 0.950 - - cAMP-dependent protein kinase regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:P30625]
22. K04H4.1 emb-9 32527 2.236 0.250 0.515 - 0.515 - 0.956 - - Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139]
23. T28B4.3 ttr-6 9497 2.197 0.238 0.501 - 0.501 - 0.957 - - TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_509110]
24. M03F4.2 act-4 354219 2.177 0.328 0.448 - 0.448 - 0.953 - - Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
25. F25H5.1 lim-9 21300 2.136 0.276 0.453 - 0.453 - 0.954 - - LIM domain family [Source:RefSeq peptide;Acc:NP_001025228]
26. Y51A2D.18 Y51A2D.18 3686 2.133 0.097 0.536 - 0.536 - 0.964 - -
27. K09H9.7 K09H9.7 15593 2.095 - 0.568 - 0.568 - 0.959 - -
28. C46G7.4 pqn-22 11560 2.046 0.248 0.423 - 0.423 - 0.952 - - Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_500907]
29. T11B7.4 alp-1 14867 1.929 0.294 0.333 - 0.333 - 0.969 - - ALP/Enigma encoding [Source:RefSeq peptide;Acc:NP_501534]
30. C54E4.2 test-1 10786 1.876 0.270 0.328 - 0.328 - 0.950 - - vertebrate proteoglycan TESTican homolog [Source:RefSeq peptide;Acc:NP_001023098]
31. F56B6.4 gyg-1 39789 1.852 0.278 0.308 - 0.308 - 0.958 - - Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
32. T27A1.4 lgc-34 7629 1.636 - 0.338 - 0.338 - 0.960 - - Ligand-Gated ion Channel [Source:RefSeq peptide;Acc:NP_493752]
33. F33C8.3 tsp-8 4074 1.616 -0.041 0.345 - 0.345 - 0.967 - - Tetraspanin [Source:RefSeq peptide;Acc:NP_510445]
34. F25H2.1 tli-1 1244 1.523 0.561 - - - - 0.962 - - ToLlIp homolog [Source:RefSeq peptide;Acc:NP_492757]
35. H19M22.3 H19M22.3 0 1.523 0.571 - - - - 0.952 - -
36. Y110A2AL.8 ptc-3 2982 1.477 - 0.262 - 0.262 - 0.953 - - PaTChed family [Source:RefSeq peptide;Acc:NP_494384]
37. K09G1.2 K09G1.2 1161 1.227 0.277 - - - - 0.950 - -
38. Y105C5B.7 Y105C5B.7 0 1.198 0.240 - - - - 0.958 - -
39. T14G10.4 ttr-54 1367 1.179 0.225 - - - - 0.954 - - TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_501855]
40. Y69E1A.8 Y69E1A.8 1254 1.118 0.158 - - - - 0.960 - -
41. T22A3.2 hsp-12.1 236 0.966 - - - - - 0.966 - - Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001076613]
42. Y94H6A.6 ubc-8 3142 0.956 - - - - - 0.956 - - UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_500245]
43. T04C12.3 T04C12.3 9583 0.78 0.172 -0.172 - -0.172 - 0.952 - -

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA