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Results for C54E4.2

Gene ID Gene Name Reads Transcripts Annotation
C54E4.2 test-1 10786 C54E4.2a.1, C54E4.2a.2, C54E4.2b, C54E4.2c.1, C54E4.2c.2 vertebrate proteoglycan TESTican homolog [Source:RefSeq peptide;Acc:NP_001023098]

Genes with expression patterns similar to C54E4.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. C54E4.2 test-1 10786 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 vertebrate proteoglycan TESTican homolog [Source:RefSeq peptide;Acc:NP_001023098]
2. F42G4.3 zyx-1 50908 6.986 0.821 0.810 0.918 0.810 0.904 0.954 0.864 0.905 Zyxin [Source:UniProtKB/Swiss-Prot;Acc:Q9U3F4]
3. T22E5.5 mup-2 65873 6.692 0.876 0.742 0.718 0.742 0.907 0.950 0.879 0.878 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
4. Y5F2A.1 ttr-16 74457 6.678 0.859 0.728 0.778 0.728 0.900 0.965 0.827 0.893 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
5. C18A11.7 dim-1 110263 6.646 0.868 0.680 0.666 0.680 0.915 0.965 0.957 0.915 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
6. M02F4.8 aqp-7 53179 6.626 0.825 0.704 0.778 0.704 0.876 0.948 0.833 0.958 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_508515]
7. T14G12.3 tag-18 22633 6.62 0.848 0.684 0.813 0.684 0.867 0.950 0.847 0.927
8. M03F4.2 act-4 354219 6.612 0.829 0.793 0.831 0.793 0.647 0.954 0.900 0.865 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
9. R148.6 heh-1 40904 6.601 0.892 0.644 0.711 0.644 0.907 0.957 0.916 0.930 Putative protein heh-1 [Source:UniProtKB/Swiss-Prot;Acc:O17271]
10. C46G7.4 pqn-22 11560 6.426 0.840 0.656 0.634 0.656 0.879 0.967 0.848 0.946 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_500907]
11. F25H5.1 lim-9 21300 6.394 0.762 0.679 0.725 0.679 0.858 0.950 0.843 0.898 LIM domain family [Source:RefSeq peptide;Acc:NP_001025228]
12. R11A5.4 pck-2 55256 6.342 0.836 0.618 0.701 0.618 0.885 0.958 0.864 0.862 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
13. Y38F1A.9 oig-2 10083 6.329 0.863 0.528 0.751 0.528 0.925 0.973 0.858 0.903 One IG domain [Source:RefSeq peptide;Acc:NP_496767]
14. F56B6.4 gyg-1 39789 6.3 0.894 0.548 0.656 0.548 0.910 0.960 0.901 0.883 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
15. T28B4.3 ttr-6 9497 6.273 0.794 0.598 0.614 0.598 0.922 0.970 0.842 0.935 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_509110]
16. Y105C5B.28 gln-3 27333 6.164 0.880 0.642 0.740 0.642 0.799 0.965 0.744 0.752 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_001255883]
17. K06A4.3 gsnl-1 4928 6.12 0.806 0.690 0.611 0.690 0.890 0.963 0.722 0.748 Gelsolin-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21253]
18. M02D8.2 M02D8.2 617 6.026 0.854 0.468 0.690 0.468 0.889 0.951 0.794 0.912
19. C34C12.5 rsu-1 6522 6.025 0.722 0.646 0.436 0.646 0.862 0.965 0.843 0.905 Ras SUppressor homolog [Source:RefSeq peptide;Acc:NP_497716]
20. F13D12.2 ldh-1 23786 5.961 0.748 0.441 0.726 0.441 0.867 0.944 0.844 0.950 L-lactate dehydrogenase [Source:UniProtKB/Swiss-Prot;Acc:Q27888]
21. C29H12.2 C29H12.2 11018 5.809 0.888 0.512 0.563 0.512 0.871 0.953 0.631 0.879
22. ZK1058.1 mmcm-1 15851 5.738 0.634 0.564 0.501 0.564 0.883 0.958 0.711 0.923 Probable methylmalonyl-CoA mutase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q23381]
23. H28G03.2 H28G03.2 2556 5.431 0.667 0.388 0.605 0.388 0.797 0.950 0.690 0.946
24. M03A8.2 atg-2 3732 5.211 - 0.566 0.729 0.566 0.873 0.950 0.686 0.841 AuTophaGy (yeast Atg homolog) [Source:RefSeq peptide;Acc:NP_509145]
25. C02D5.3 gsto-2 7149 5.139 0.472 0.439 0.606 0.439 0.845 0.958 0.696 0.684 Probable glutathione transferase omega-2 [Source:UniProtKB/Swiss-Prot;Acc:P34277]
26. Y60A3A.1 unc-51 5262 4.947 0.254 0.511 0.411 0.511 0.767 0.955 0.667 0.871 Serine/threonine-protein kinase unc-51 [Source:UniProtKB/Swiss-Prot;Acc:Q23023]
27. K10D3.2 unc-14 6133 4.909 0.298 0.517 0.518 0.517 0.731 0.954 0.608 0.766 UNC-14; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECQ1]
28. K09G1.2 K09G1.2 1161 4.866 0.825 - 0.533 - 0.858 0.953 0.798 0.899
29. C14F5.1 dct-1 2010 4.855 0.321 0.454 0.322 0.454 0.790 0.963 0.668 0.883 NIP3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09969]
30. M195.2 M195.2 0 4.726 0.865 - 0.790 - 0.725 0.960 0.658 0.728
31. Y105C5B.7 Y105C5B.7 0 4.623 0.686 - 0.425 - 0.824 0.956 0.796 0.936
32. C14F5.5 sem-5 4488 4.594 0.262 0.485 0.224 0.485 0.749 0.967 0.565 0.857 Sex muscle abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:P29355]
33. ZK154.1 ZK154.1 0 4.344 0.773 - 0.731 - 0.626 0.956 0.392 0.866
34. W08E3.4 W08E3.4 789 4.265 0.453 - 0.507 - 0.884 0.956 0.638 0.827
35. C33D9.5 C33D9.5 0 3.81 - - 0.568 - 0.827 0.956 0.613 0.846
36. C24H10.3 C24H10.3 0 3.671 0.261 - 0.356 - 0.685 0.953 0.714 0.702
37. F14B8.5 F14B8.5 583 3.307 0.923 - - - - 0.956 0.651 0.777
38. F53E2.1 tag-304 394 1.876 0.270 0.328 - 0.328 - 0.950 - -
39. Y60A3A.25 Y60A3A.25 0 1.819 - - - - - 0.957 - 0.862
40. F09E8.7 lev-1 291 1.796 - - - - - 0.957 - 0.839 Acetylcholine receptor subunit beta-type lev-1 [Source:UniProtKB/Swiss-Prot;Acc:Q27218]
41. T22A3.2 hsp-12.1 236 1.773 - - - - - 0.957 - 0.816 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001076613]
42. C55C2.5 aat-5 749 1.458 - 0.251 - 0.251 - 0.956 - - Amino Acid Transporter [Source:RefSeq peptide;Acc:NP_491002]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA