C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for F28C6.8

Gene ID Gene Name Reads Transcripts Annotation
F28C6.8 F28C6.8 3356 F28C6.8a, F28C6.8b

Genes with expression patterns similar to F28C6.8

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F28C6.8 F28C6.8 3356 2 - 1.000 - 1.000 - - - -
2. W05F2.6 W05F2.6 7609 1.922 - 0.961 - 0.961 - - - -
3. C18A3.3 C18A3.3 9387 1.914 - 0.957 - 0.957 - - - - Probable rRNA-processing protein EBP2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09958]
4. T28D9.10 snr-3 9995 1.914 - 0.957 - 0.957 - - - - Probable small nuclear ribonucleoprotein Sm D1 [Source:UniProtKB/Swiss-Prot;Acc:Q10013]
5. Y73B6BL.5 seu-1 8719 1.914 - 0.957 - 0.957 - - - - Suppressor of Ectopic Unc-5 [Source:RefSeq peptide;Acc:NP_001293775]
6. F54C9.6 bcs-1 1577 1.912 - 0.956 - 0.956 - - - - BCS1 (mitochondrial chaperone) homolog [Source:RefSeq peptide;Acc:NP_001022192]
7. Y116A8A.9 map-2 5122 1.912 - 0.956 - 0.956 - - - - Methionine aminopeptidase 2 [Source:RefSeq peptide;Acc:NP_001255907]
8. F21C3.3 hint-1 7078 1.91 - 0.955 - 0.955 - - - - Histidine triad nucleotide-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P53795]
9. C06A1.5 rpb-6 7515 1.908 - 0.954 - 0.954 - - - - Probable DNA-directed RNA polymerases I, II, and III subunit RPABC2 [Source:UniProtKB/Swiss-Prot;Acc:Q17684]
10. C14C10.4 mma-1 3306 1.908 - 0.954 - 0.954 - - - -
11. D2023.5 mpst-1 10328 1.908 - 0.954 - 0.954 - - - - Putative thiosulfate sulfurtransferase mpst-1 [Source:UniProtKB/Swiss-Prot;Acc:O17730]
12. B0511.10 eif-3.E 10041 1.908 - 0.954 - 0.954 - - - - Eukaryotic translation initiation factor 3 subunit E [Source:UniProtKB/Swiss-Prot;Acc:O61820]
13. F23F1.10 F23F1.10 3354 1.906 - 0.953 - 0.953 - - - -
14. T21C9.12 scpl-4 14723 1.906 - 0.953 - 0.953 - - - - Mitochondrial import inner membrane translocase subunit TIM50 [Source:UniProtKB/Swiss-Prot;Acc:Q22647]
15. C40H1.1 cpb-1 7617 1.906 - 0.953 - 0.953 - - - - Cytoplasmic polyadenylation element-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q03571]
16. T23D8.3 T23D8.3 11367 1.904 - 0.952 - 0.952 - - - - Protein LTV1 homolog [Source:UniProtKB/Swiss-Prot;Acc:O02327]
17. Y40B1B.7 Y40B1B.7 8461 1.904 - 0.952 - 0.952 - - - -
18. B0035.12 sart-3 7188 1.904 - 0.952 - 0.952 - - - - human SART-3/p110 homolog [Source:RefSeq peptide;Acc:NP_502136]
19. Y39A1A.11 dhs-11 1352 1.904 - 0.952 - 0.952 - - - - DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_499346]
20. Y18D10A.25 fkb-8 8968 1.904 - 0.952 - 0.952 - - - - Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021725]
21. T28A8.4 T28A8.4 4472 1.904 - 0.952 - 0.952 - - - -
22. W03B1.4 sars-2 2356 1.902 - 0.951 - 0.951 - - - - Seryl Amino-acyl tRNA Synthetase [Source:RefSeq peptide;Acc:NP_500549]
23. Y54E10A.10 Y54E10A.10 9302 1.902 - 0.951 - 0.951 - - - - Ribosome production factor 2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9N3F0]
24. Y40B10A.1 lbp-9 30119 1.902 - 0.951 - 0.951 - - - - Fatty acid-binding protein homolog 9 [Source:UniProtKB/Swiss-Prot;Acc:Q965W1]
25. Y110A7A.19 let-630 3830 1.9 - 0.950 - 0.950 - - - -

Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA