C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male3, section s14.

Sample reads: 26,465. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F15E11.1 pud-2.1 358.00 13527.21 Protein Up-regulated in Daf-2(gf) [Source:RefSeq peptide;Acc:NP_503640]
2. F15E11.14 pud-2.2 317.00 11978.00 Protein Up-regulated in Daf-2(gf) [Source:RefSeq peptide;Acc:NP_503640]
3. Y38H6C.1 dct-16 209.00 7897.17 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
4. K08D12.6 K08D12.6 207.00 7821.60
5. F11H8.3 col-8 200.00 7557.10 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
6. F11G11.11 col-20 189.00 7141.46 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
7. Y82E9BR.3 Y82E9BR.3 187.00 7065.89 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
8. T27E9.1 ant-1.1 173.00 6536.89 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
9. F26F12.1 col-140 171.00 6461.32 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
10. F21F8.7 asp-6 169.00 6385.75 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
11. C53B4.5 col-119 167.00 6310.18 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
12. T27E4.2 hsp-16.11 167.00 6310.18 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
13. Y39B6A.20 asp-1 158.00 5970.11 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
14. T27E4.8 hsp-16.1 154.00 5818.97 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
15. C34F6.3 col-179 147.00 5554.47 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
16. Y19D10B.7 pud-1.2 147.00 5554.47 Protein Up-regulated in Daf-2(gf) [Source:RefSeq peptide;Acc:NP_503641]
17. C34F6.2 col-178 145.00 5478.90 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
18. F13D12.6 F13D12.6 145.00 5478.90 Uncharacterized serine carboxypeptidase F13S12.6 [Source:UniProtKB/Swiss-Prot;Acc:P52715]
19. K02F2.2 ahcy-1 145.00 5478.90 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
20. F25A2.1 F25A2.1 142.00 5365.54
21. F15E11.13 pud-1.1 138.00 5214.40 Protein Up-regulated in Daf-2(gf) [Source:RefSeq peptide;Acc:NP_503641]
22. T05A1.2 col-122 137.00 5176.61 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
23. C24F3.6 col-124 135.00 5101.04 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
24. F02A9.3 far-2 132.00 4987.69 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
25. C52E4.1 cpr-1 125.00 4723.19 Gut-specific cysteine proteinase [Source:UniProtKB/Swiss-Prot;Acc:P25807]
26. Y94H6A.10 Y94H6A.10 125.00 4723.19
27. Y119D3B.21 Y119D3B.21 108.00 4080.83
28. W03G11.1 col-181 103.00 3891.91 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
29. Y77E11A.15 col-106 103.00 3891.91 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
30. F15A2.1 col-184 94.30 3563.17 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
31. K10B3.9 mai-1 94.30 3563.17 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
32. T04C12.4 act-3 91.40 3453.59 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
33. T04C12.6 act-1 88.60 3347.80 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
34. W06H8.8 ttn-1 88.60 3347.80 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
35. VC5.3 npa-1 87.20 3294.90 Nematode Polyprotein Allergen related [Source:RefSeq peptide;Acc:NP_504795]
36. K09F5.3 spp-14 85.80 3242.00 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001041271]
37. R10E11.8 vha-1 85.80 3242.00 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
38. W07B8.5 cpr-5 85.80 3242.00 Cathepsin B-like cysteine proteinase 5 [Source:UniProtKB/Swiss-Prot;Acc:P43509]
39. T15B7.3 col-143 84.40 3189.10 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
40. ZK1193.1 col-19 84.40 3189.10 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
41. E04A4.7 cyc-2.1 83.00 3136.20 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
42. F11C3.3 unc-54 83.00 3136.20 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
43. M03F4.2 act-4 81.60 3083.30 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
44. F14F7.1 col-98 77.50 2928.38 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
45. Y105E8B.1 lev-11 77.50 2928.38 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
46. C06A8.3 C06A8.3 76.20 2879.25
47. C17H12.14 vha-8 76.20 2879.25 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
48. T08A9.9 spp-5 76.20 2879.25 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_509238]
49. ZK721.2 unc-27 76.20 2879.25 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
50. F54C1.7 pat-10 74.80 2826.36 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
51. F57F5.1 F57F5.1 74.80 2826.36
52. C49F5.1 sams-1 73.50 2777.23 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
53. C34E10.6 atp-2 70.80 2675.21 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
54. C32D5.9 lgg-1 68.20 2576.97
55. F44C4.3 cpr-4 66.90 2527.85 Cathepsin B-like cysteine proteinase 4 [Source:UniProtKB/Swiss-Prot;Acc:P43508]
56. F57B1.4 col-160 66.90 2527.85 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
57. Y19D10A.9 clec-209 65.60 2478.73 C-type LECtin [Source:RefSeq peptide;Acc:NP_503650]
58. F07A5.7 unc-15 64.40 2433.39 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
59. F09F7.2 mlc-3 64.40 2433.39 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
60. Y67H2A.8 fat-1 63.10 2384.26 Omega-3 fatty acid desaturase fat-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEQ0]
61. R11A5.4 pck-2 61.80 2335.14 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
62. F31E3.5 eef-1A.1 60.50 2286.02 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
63. T03E6.7 cpl-1 60.50 2286.02 CathePsin L family [Source:RefSeq peptide;Acc:NP_001256718]
64. F56A4.2 F56A4.2 59.30 2240.68 C-type LECtin [Source:RefSeq peptide;Acc:NP_503650]
65. Y38A10A.5 crt-1 59.30 2240.68 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
66. B0213.2 nlp-27 58.00 2191.56 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
67. Y34D9A.11 spp-23 58.00 2191.56 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001021741]
68. F01G4.6 F01G4.6 56.80 2146.22 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
69. Y69A2AR.18 Y69A2AR.18 56.80 2146.22
70. C33G8.2 C33G8.2 55.50 2097.10
71. F46F11.5 vha-10 55.50 2097.10 Probable V-type proton ATPase subunit G [Source:UniProtKB/Swiss-Prot;Acc:P91303]
72. T19C4.7 nlp-33 54.30 2051.75 Neuropeptide-like protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZN4]
73. W02D3.5 lbp-6 54.30 2051.75 Fatty acid-binding protein homolog 6 [Source:UniProtKB/Swiss-Prot;Acc:O01812]
74. Y39B6A.1 Y39B6A.1 54.30 2051.75
75. C04F12.4 rpl-14 53.00 2002.63 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
76. R02F2.1 R02F2.1 53.00 2002.63
77. F01F1.12 aldo-2 51.80 1957.29 Fructose-bisphosphate aldolase 2 [Source:UniProtKB/Swiss-Prot;Acc:P46563]
78. F46H5.3 F46H5.3 51.80 1957.29 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
79. F56E10.4 rps-27 51.80 1957.29 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
80. C35B1.5 C35B1.5 50.60 1911.95
81. R05G6.7 vdac-1 50.60 1911.95 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
82. Y105C5B.28 gln-3 50.60 1911.95 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_001255883]
83. RIT1P.688 49.40 1866.60
84. T20G5.2 cts-1 48.20 1821.26 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
85. T25F10.6 clik-1 48.20 1821.26 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
86. ZK484.1 oaz-1 48.20 1821.26 Ornithine decarboxylase antizyme [Source:UniProtKB/Swiss-Prot;Acc:Q9NHZ6]
87. C07A12.4 pdi-2 47.00 1775.92 Protein disulfide-isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q17770]
88. F25H2.5 ndk-1 47.00 1775.92 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
89. F52D10.3 ftt-2 47.00 1775.92 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
90. C27B7.9 C27B7.9 45.80 1730.58
91. C54G6.5 spp-17 45.80 1730.58 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_740777]
92. F11C7.5 osm-11 45.80 1730.58
93. F26D10.3 hsp-1 45.80 1730.58 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
94. F39B2.6 rps-26 45.80 1730.58 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
95. Y105C5B.5 Y105C5B.5 45.80 1730.58
96. Y55B1AR.1 lec-6 45.80 1730.58 Galectin [Source:RefSeq peptide;Acc:NP_497215]
97. Y79H2A.1 brp-1 45.80 1730.58 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
98. F21F8.3 asp-5 44.60 1685.23 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_505135]
99. T21H3.3 cmd-1 44.60 1685.23 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
100. Y67H2A.5 Y67H2A.5 44.60 1685.23
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA