C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for Y48B6A.11

Gene ID Gene Name Reads Transcripts Annotation
Y48B6A.11 jmjd-2 4611 Y48B6A.11 Lysine-specific demethylase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9U297]

Genes with expression patterns similar to Y48B6A.11

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. Y48B6A.11 jmjd-2 4611 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Lysine-specific demethylase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9U297]
2. F11A10.6 F11A10.6 8364 7.435 0.944 0.963 0.974 0.963 0.928 0.949 0.904 0.810
3. Y71F9B.3 yop-1 26834 7.368 0.971 0.962 0.957 0.962 0.863 0.927 0.851 0.875 Receptor expression-enhancing protein [Source:RefSeq peptide;Acc:NP_491033]
4. R09A1.1 ergo-1 7855 7.358 0.929 0.977 0.989 0.977 0.934 0.919 0.880 0.753 Piwi-like protein ergo-1 [Source:UniProtKB/Swiss-Prot;Acc:O61931]
5. T24H10.3 dnj-23 11446 7.319 0.944 0.968 0.971 0.968 0.905 0.884 0.905 0.774 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
6. Y37A1B.2 lst-4 11343 7.315 0.954 0.950 0.953 0.950 0.852 0.909 0.923 0.824 Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
7. Y54E5B.4 ubc-16 8386 7.31 0.956 0.949 0.972 0.949 0.869 0.945 0.941 0.729 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
8. Y73B6A.5 lin-45 10864 7.271 0.948 0.966 0.963 0.966 0.900 0.943 0.916 0.669 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
9. B0285.5 hse-5 6071 7.269 0.957 0.960 0.980 0.960 0.916 0.922 0.917 0.657 D-glucuronyl C5-epimerase [Source:UniProtKB/Swiss-Prot;Acc:P46555]
10. T19B4.7 unc-40 5563 7.264 0.967 0.951 0.963 0.951 0.908 0.884 0.816 0.824 Unc-40 protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF96]
11. ZK858.4 mel-26 15994 7.262 0.974 0.967 0.971 0.967 0.919 0.947 0.848 0.669 Protein maternal effect lethal 26 [Source:UniProtKB/Swiss-Prot;Acc:Q94420]
12. C48G7.3 rin-1 9029 7.254 0.905 0.934 0.962 0.934 0.910 0.960 0.912 0.737 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
13. R11A5.2 nud-2 15326 7.254 0.941 0.955 0.968 0.955 0.885 0.840 0.940 0.770 Aspergillus NUclear Division related [Source:RefSeq peptide;Acc:NP_492172]
14. F43G6.9 patr-1 23000 7.248 0.951 0.943 0.961 0.943 0.901 0.931 0.951 0.667 Protein PAT1 homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20374]
15. Y49E10.6 his-72 32293 7.248 0.951 0.951 0.947 0.951 0.865 0.943 0.915 0.725 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
16. T01H8.1 rskn-1 11280 7.244 0.963 0.973 0.969 0.973 0.943 0.841 0.782 0.800 Putative ribosomal protein S6 kinase alpha-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21734]
17. T09A12.4 nhr-66 4746 7.243 0.910 0.970 0.962 0.970 0.908 0.958 0.787 0.778 Nuclear Hormone Receptor family [Source:RefSeq peptide;Acc:NP_001294133]
18. F39B2.1 hinf-1 10002 7.243 0.971 0.955 0.978 0.955 0.840 0.863 0.855 0.826 HIstone Nuclear Factor p (P) homolog [Source:RefSeq peptide;Acc:NP_493579]
19. Y48G9A.8 ppk-2 8863 7.239 0.936 0.956 0.951 0.956 0.914 0.937 0.870 0.719 PIP Kinase [Source:RefSeq peptide;Acc:NP_497500]
20. F36H2.2 ent-6 3952 7.236 0.968 0.938 0.974 0.938 0.834 0.915 0.815 0.854 Equilibrative Nucleoside Transporter [Source:RefSeq peptide;Acc:NP_001251033]
21. F57B9.10 rpn-6.1 20218 7.236 0.905 0.957 0.923 0.957 0.830 0.916 0.890 0.858 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
22. T24F1.1 raga-1 16171 7.229 0.884 0.943 0.929 0.943 0.835 0.926 0.957 0.812 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
23. K04G7.1 K04G7.1 3045 7.229 0.942 0.908 0.978 0.908 0.903 0.897 0.848 0.845
24. D1007.8 D1007.8 1265 7.225 0.922 0.937 0.974 0.937 0.930 0.869 0.934 0.722
25. T19C3.8 fem-2 9225 7.218 0.933 0.930 0.964 0.930 0.873 0.874 0.908 0.806 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
26. Y45G5AM.2 Y45G5AM.2 1267 7.209 0.932 0.914 0.976 0.914 0.890 0.896 0.943 0.744
27. T04A8.9 dnj-18 10313 7.204 0.933 0.920 0.967 0.920 0.794 0.946 0.889 0.835 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_497962]
28. T14G10.6 tsp-12 10308 7.204 0.970 0.963 0.953 0.963 0.933 0.866 0.927 0.629 Tetraspanin [Source:RefSeq peptide;Acc:NP_501853]
29. F22D3.1 ceh-38 8237 7.191 0.967 0.946 0.981 0.946 0.850 0.952 0.932 0.617 Homeobox protein ceh-38 [Source:UniProtKB/Swiss-Prot;Acc:Q19720]
30. T12D8.1 set-16 5542 7.188 0.941 0.919 0.967 0.919 0.848 0.891 0.868 0.835 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_499819]
31. ZK1128.8 vps-29 5118 7.187 0.895 0.946 0.970 0.946 0.833 0.907 0.879 0.811 Vacuolar protein sorting-associated protein 29 [Source:RefSeq peptide;Acc:NP_001022987]
32. K04G2.2 aho-3 15189 7.187 0.971 0.944 0.968 0.944 0.921 0.871 0.925 0.643
33. F25B3.6 rtfo-1 11965 7.182 0.966 0.960 0.989 0.960 0.861 0.801 0.926 0.719 RNA polymerase-associated protein RTF1 homolog [Source:UniProtKB/Swiss-Prot;Acc:G5EBY0]
34. C53A5.3 hda-1 18413 7.181 0.939 0.951 0.971 0.951 0.837 0.877 0.937 0.718 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
35. F32D1.7 F32D1.7 3465 7.175 0.886 0.977 0.896 0.977 0.875 0.945 0.843 0.776
36. Y69A2AR.6 vamp-7 4044 7.172 0.941 0.959 0.982 0.959 0.879 0.927 0.826 0.699 VAMP (Vesicle Associated Membrane Protein) homolog [Source:RefSeq peptide;Acc:NP_500232]
37. Y41C4A.10 elb-1 9743 7.172 0.912 0.929 0.952 0.929 0.909 0.917 0.899 0.725 ELongin B [Source:RefSeq peptide;Acc:NP_499517]
38. K07A1.12 lin-53 15817 7.17 0.942 0.936 0.965 0.936 0.890 0.872 0.926 0.703 Probable histone-binding protein lin-53 [Source:UniProtKB/Swiss-Prot;Acc:P90916]
39. C33H5.19 tag-321 5783 7.168 0.959 0.952 0.975 0.952 0.894 0.914 0.809 0.713
40. K02A11.1 gfi-2 8382 7.166 0.975 0.954 0.982 0.954 0.844 0.824 0.821 0.812 GEI-4 (Four) Interacting protein [Source:RefSeq peptide;Acc:NP_492587]
41. C28H8.1 bcl-7 2283 7.166 0.949 0.928 0.968 0.928 0.901 0.920 0.926 0.646 BCL7-like protein C28H8.1 [Source:UniProtKB/Swiss-Prot;Acc:Q09242]
42. R10A10.2 rbx-2 4799 7.162 0.948 0.945 0.963 0.945 0.879 0.802 0.930 0.750 yeast RBX (ring finger protein) homolog [Source:RefSeq peptide;Acc:NP_491849]
43. Y57G11C.13 arl-8 26649 7.161 0.915 0.949 0.967 0.949 0.884 0.903 0.796 0.798 ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
44. F01F1.4 rabn-5 5269 7.158 0.956 0.926 0.961 0.926 0.863 0.870 0.906 0.750 RABaptiN (rab effector) [Source:RefSeq peptide;Acc:NP_498266]
45. R107.4 ikke-1 7982 7.154 0.977 0.955 0.981 0.955 0.918 0.926 0.765 0.677 Inhibitor of nuclear factor kappa-B kinase epsilon subunit homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P32742]
46. ZC376.7 atfs-1 7905 7.154 0.902 0.919 0.950 0.919 0.885 0.853 0.876 0.850 Activating Transcription Factor associated with Stress [Source:RefSeq peptide;Acc:NP_506515]
47. C07H4.2 clh-5 6446 7.153 0.910 0.940 0.972 0.940 0.891 0.846 0.899 0.755 Chloride channel protein [Source:RefSeq peptide;Acc:NP_495940]
48. Y38C9A.2 cgp-1 11756 7.148 0.909 0.939 0.956 0.939 0.957 0.886 0.941 0.621 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
49. F37C12.2 epg-4 3983 7.147 0.934 0.937 0.960 0.937 0.927 0.965 0.830 0.657 Ectopic P granules protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q20123]
50. W02D3.11 hrpf-1 4125 7.146 0.932 0.943 0.956 0.943 0.878 0.883 0.916 0.695 HnRNP F homolog [Source:RefSeq peptide;Acc:NP_740877]
51. C01F6.1 cpna-3 5414 7.145 0.932 0.915 0.981 0.915 0.934 0.898 0.893 0.677 CoPiNe domain protein, Atypical [Source:RefSeq peptide;Acc:NP_501584]
52. T26E3.3 par-6 8650 7.144 0.924 0.941 0.963 0.941 0.879 0.922 0.900 0.674 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
53. ZK484.4 ZK484.4 6097 7.142 0.939 0.922 0.973 0.922 0.941 0.903 0.823 0.719
54. R06A4.4 imb-2 10302 7.142 0.918 0.914 0.975 0.914 0.933 0.870 0.950 0.668 IMportin Beta family [Source:RefSeq peptide;Acc:NP_496987]
55. F28D1.10 gex-3 5286 7.14 0.888 0.925 0.956 0.925 0.930 0.891 0.938 0.687 Membrane-associated protein gex-3 [Source:UniProtKB/Swiss-Prot;Acc:P55163]
56. R10E11.3 usp-46 3909 7.139 0.942 0.935 0.976 0.935 0.896 0.910 0.885 0.660 Ubiquitin carboxyl-terminal hydrolase 46 [Source:UniProtKB/Swiss-Prot;Acc:P34547]
57. T01B7.6 trcs-2 9792 7.138 0.979 0.951 0.968 0.951 0.898 0.918 0.913 0.560 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
58. M01B12.3 arx-7 7584 7.131 0.827 0.928 0.920 0.928 0.877 0.951 0.961 0.739 Actin-related protein 2/3 complex subunit 5 [Source:RefSeq peptide;Acc:NP_491099]
59. Y69A2AR.2 ric-8 4224 7.129 0.933 0.947 0.977 0.947 0.859 0.921 0.904 0.641 Synembryn [Source:UniProtKB/Swiss-Prot;Acc:Q9GSX9]
60. F54E7.3 par-3 8773 7.129 0.978 0.964 0.973 0.964 0.849 0.864 0.891 0.646 Partitioning defective protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q17353]
61. T03D8.1 num-1 8909 7.129 0.929 0.953 0.980 0.953 0.877 0.882 0.858 0.697 Numb-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTY6]
62. F55C5.7 rskd-1 4814 7.127 0.890 0.941 0.964 0.941 0.869 0.900 0.823 0.799 Ribosomal protein S6 Kinase Delta homolog [Source:RefSeq peptide;Acc:NP_506082]
63. W06D4.5 snx-3 13450 7.125 0.849 0.950 0.952 0.950 0.900 0.949 0.843 0.732 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492437]
64. T22F3.3 T22F3.3 59630 7.124 0.946 0.961 0.954 0.961 0.897 0.907 0.880 0.618 Alpha-1,4 glucan phosphorylase [Source:RefSeq peptide;Acc:NP_504007]
65. F40F9.7 drap-1 10298 7.119 0.946 0.960 0.957 0.960 0.719 0.871 0.841 0.865 DRAP1 corepressor homolog [Source:RefSeq peptide;Acc:NP_001023907]
66. W02B9.1 hmr-1 13240 7.118 0.983 0.961 0.985 0.961 0.753 0.823 0.899 0.753 Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]
67. H21P03.3 sms-1 7737 7.111 0.965 0.938 0.968 0.938 0.732 0.824 0.871 0.875 Phosphatidylcholine:ceramide cholinephosphotransferase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U3D4]
68. Y57G11C.36 Y57G11C.36 10590 7.107 0.952 0.942 0.970 0.942 0.894 0.943 0.899 0.565
69. C14B1.4 wdr-5.1 4424 7.106 0.962 0.918 0.955 0.918 0.904 0.863 0.918 0.668 WD repeat-containing protein wdr-5.1 [Source:UniProtKB/Swiss-Prot;Acc:Q17963]
70. C27B7.8 rap-1 11965 7.102 0.958 0.922 0.962 0.922 0.844 0.846 0.816 0.832 Ras-related protein Rap-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18246]
71. Y41D4B.13 ced-2 10100 7.101 0.957 0.939 0.973 0.939 0.891 0.913 0.935 0.554 Cell death abnormality protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9NHC3]
72. R08D7.6 pde-2 9491 7.101 0.972 0.922 0.943 0.922 0.779 0.885 0.914 0.764 Probable 3',5'-cyclic phosphodiesterase pde-2 [Source:UniProtKB/Swiss-Prot;Acc:P30645]
73. K08E7.1 eak-7 18960 7.1 0.899 0.952 0.953 0.952 0.836 0.895 0.923 0.690 Enhancer of AKt-1 null [Source:RefSeq peptide;Acc:NP_502405]
74. Y51H1A.4 ing-3 8617 7.097 0.957 0.941 0.981 0.941 0.922 0.828 0.942 0.585 Inhibitor of growth protein [Source:RefSeq peptide;Acc:NP_496909]
75. Y54E5B.1 smp-1 4196 7.097 0.955 0.938 0.976 0.938 0.891 0.908 0.871 0.620 Semaphorin-1A [Source:UniProtKB/Swiss-Prot;Acc:Q17330]
76. M01E5.4 M01E5.4 7638 7.097 0.961 0.926 0.955 0.926 0.857 0.885 0.901 0.686
77. Y76A2B.6 scav-2 7247 7.097 0.956 0.915 0.944 0.915 0.896 0.858 0.869 0.744 SCAVenger receptor (CD36 family) related [Source:RefSeq peptide;Acc:NP_499802]
78. R13A5.1 cup-5 5245 7.096 0.942 0.935 0.979 0.935 0.940 0.893 0.819 0.653 CUP-5L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q8T666]
79. R74.5 asd-1 6481 7.096 0.968 0.978 0.977 0.978 0.744 0.827 0.854 0.770 RNA-binding protein ASD-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEW7]
80. T05C12.7 cct-1 41264 7.095 0.852 0.913 0.895 0.913 0.871 0.912 0.964 0.775 T-complex protein 1 subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P41988]
81. B0334.11 ooc-3 5475 7.094 0.942 0.942 0.974 0.942 0.895 0.769 0.900 0.730
82. R07H5.1 prx-14 5489 7.09 0.938 0.938 0.965 0.938 0.879 0.892 0.936 0.604 PeRoXisome assembly factor [Source:RefSeq peptide;Acc:NP_502097]
83. Y47D3A.27 teg-1 5171 7.09 0.942 0.921 0.958 0.921 0.857 0.916 0.906 0.669 Tumorous Enhancer of Glp-1(gf) [Source:RefSeq peptide;Acc:NP_499455]
84. T26A5.7 set-1 6948 7.089 0.969 0.962 0.974 0.962 0.855 0.791 0.891 0.685 Probable histone-lysine N-methyltransferase set-1 [Source:UniProtKB/Swiss-Prot;Acc:Q22795]
85. C08B11.3 swsn-7 11608 7.087 0.954 0.958 0.976 0.958 0.860 0.806 0.909 0.666 SWI/SNF nucleosome remodeling complex component [Source:UniProtKB/Swiss-Prot;Acc:Q09441]
86. T24D1.1 sqv-5 12569 7.087 0.952 0.949 0.985 0.949 0.915 0.895 0.879 0.563 Chondroitin sulfate synthase sqv-5 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z1Z1]
87. C45B11.1 pak-2 6114 7.086 0.981 0.943 0.984 0.943 0.855 0.893 0.868 0.619 Serine/threonine-protein kinase pak-2 [Source:UniProtKB/Swiss-Prot;Acc:G5EFU0]
88. Y18H1A.3 hgap-1 6247 7.085 0.969 0.930 0.941 0.930 0.882 0.914 0.833 0.686 Heterodimeric GTPase Activating Protein subunit [Source:RefSeq peptide;Acc:NP_001293169]
89. ZK593.4 rbr-2 10600 7.085 0.912 0.946 0.968 0.946 0.826 0.802 0.828 0.857 Lysine-specific demethylase rbr-2 [Source:UniProtKB/Swiss-Prot;Acc:Q23541]
90. C06H2.6 lmtr-3 11122 7.082 0.960 0.957 0.968 0.957 0.704 0.886 0.853 0.797 Late endosomal/lysosomal adaptor, Mapk (MAPK) and mToR (MTOR) activator homolog [Source:RefSeq peptide;Acc:NP_741627]
91. Y106G6A.2 epg-8 3015 7.08 0.953 0.946 0.976 0.946 0.847 0.877 0.810 0.725 Ectopic P Granules [Source:RefSeq peptide;Acc:NP_740908]
92. D1022.1 ubc-6 9722 7.079 0.872 0.928 0.965 0.928 0.800 0.845 0.887 0.854 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_001040755]
93. Y46G5A.5 pisy-1 13040 7.075 0.895 0.943 0.982 0.943 0.868 0.835 0.919 0.690 PhosphatidylInositol SYnthase [Source:RefSeq peptide;Acc:NP_496711]
94. F56C9.11 F56C9.11 4388 7.072 0.942 0.940 0.966 0.940 0.794 0.877 0.809 0.804
95. M04B2.1 mep-1 14260 7.072 0.874 0.910 0.976 0.910 0.886 0.812 0.920 0.784 MOG interacting and ectopic P-granules protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21502]
96. T14G10.3 ttr-53 7558 7.071 0.944 0.927 0.961 0.927 0.784 0.867 0.816 0.845 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_501856]
97. ZK1290.4 nfi-1 5353 7.071 0.910 0.945 0.953 0.945 0.893 0.898 0.875 0.652 NFI (Nuclear Factor I) family [Source:RefSeq peptide;Acc:NP_001022505]
98. C25D7.7 rap-2 6167 7.071 0.940 0.935 0.967 0.935 0.839 0.890 0.870 0.695 RAP homolog (vertebrate Rap GTPase family) [Source:RefSeq peptide;Acc:NP_506707]
99. R10E11.1 cbp-1 20447 7.07 0.891 0.945 0.966 0.945 0.735 0.858 0.814 0.916
100. C01G8.3 dhs-1 5394 7.07 0.910 0.935 0.973 0.935 0.873 0.870 0.927 0.647 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491557]

There are 1106 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA