C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact

Results for T21C9.2

Gene ID Gene Name Reads Transcripts Annotation
T21C9.2 vps-54 2901 T21C9.2a, T21C9.2b Vacuolar protein sorting-associated protein 54 [Source:UniProtKB/Swiss-Prot;Acc:Q22639]

Genes with expression patterns similar to T21C9.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T21C9.2 vps-54 2901 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Vacuolar protein sorting-associated protein 54 [Source:UniProtKB/Swiss-Prot;Acc:Q22639]
2. F11A10.6 F11A10.6 8364 7.292 0.920 0.961 0.878 0.961 0.955 0.853 0.859 0.905
3. Y37A1B.2 lst-4 11343 7.287 0.927 0.969 0.945 0.969 0.911 0.883 0.899 0.784 Sorting nexin lst-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4E2]
4. K08D9.3 apx-1 7784 7.239 0.891 0.964 0.915 0.964 0.897 0.922 0.814 0.872 Anterior pharynx in excess protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P41990]
5. Y92C3B.3 rab-18 12556 7.238 0.870 0.955 0.933 0.955 0.904 0.929 0.885 0.807 Ras-related protein Rab-18 [Source:UniProtKB/Swiss-Prot;Acc:Q8MXS1]
6. K07C5.1 arx-2 20142 7.222 0.883 0.955 0.894 0.955 0.896 0.829 0.931 0.879 Actin-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P53489]
7. T12G3.7 tgn-38 4468 7.203 0.882 0.904 0.891 0.904 0.948 0.956 0.818 0.900 Trans-Golgi Network protein homolog [Source:RefSeq peptide;Acc:NP_001255605]
8. F38A5.1 odr-8 5283 7.187 0.895 0.954 0.874 0.954 0.898 0.851 0.900 0.861 Ufm1-specific protease [Source:UniProtKB/Swiss-Prot;Acc:Q94218]
9. VF39H2L.1 syx-17 2953 7.18 0.891 0.925 0.958 0.925 0.911 0.848 0.833 0.889 SYntaXin [Source:RefSeq peptide;Acc:NP_492342]
10. T26E3.3 par-6 8650 7.163 0.879 0.962 0.893 0.962 0.897 0.775 0.872 0.923 Partitioning defective protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NAN2]
11. Y54E5B.4 ubc-16 8386 7.162 0.901 0.963 0.878 0.963 0.900 0.848 0.911 0.798 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_493587]
12. D1007.8 D1007.8 1265 7.158 0.963 0.949 0.919 0.949 0.944 0.638 0.893 0.903
13. F40F8.9 lsm-1 5917 7.146 0.904 0.945 0.901 0.945 0.961 0.714 0.905 0.871 LSM Sm-like protein [Source:RefSeq peptide;Acc:NP_496385]
14. Y38C9A.2 cgp-1 11756 7.143 0.926 0.959 0.949 0.959 0.909 0.678 0.906 0.857 GTP-binding protein cgp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q18905]
15. Y32H12A.4 szy-2 7927 7.132 0.901 0.950 0.927 0.950 0.910 0.881 0.832 0.781 Suppressor of ZYg-1 [Source:RefSeq peptide;Acc:NP_498147]
16. T24F1.1 raga-1 16171 7.124 0.884 0.960 0.907 0.960 0.859 0.804 0.917 0.833 RAs-related GTP-binding protein A [Source:RefSeq peptide;Acc:NP_496415]
17. T20D3.7 vps-26 9349 7.114 0.870 0.973 0.937 0.973 0.884 0.728 0.887 0.862 Vacuolar protein sorting-associated protein 26 [Source:UniProtKB/Swiss-Prot;Acc:O01258]
18. B0285.1 cdk-12 5900 7.109 0.859 0.961 0.918 0.961 0.909 0.830 0.915 0.756 Cyclin-dependent kinase 12 [Source:UniProtKB/Swiss-Prot;Acc:P46551]
19. ZK632.11 ZK632.11 1064 7.1 0.901 0.861 0.934 0.861 0.905 0.973 0.856 0.809
20. F55A12.3 ppk-1 8598 7.1 0.924 0.953 0.918 0.953 0.898 0.777 0.850 0.827 PIP Kinase [Source:RefSeq peptide;Acc:NP_491576]
21. C48B4.4 ced-7 3750 7.099 0.871 0.954 0.926 0.954 0.936 0.898 0.788 0.772 ABC transporter ced-7 [Source:UniProtKB/Swiss-Prot;Acc:P34358]
22. W06D4.5 snx-3 13450 7.092 0.852 0.960 0.927 0.960 0.850 0.879 0.797 0.867 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492437]
23. Y57G11C.36 Y57G11C.36 10590 7.084 0.902 0.955 0.851 0.955 0.887 0.858 0.884 0.792
24. Y73B6A.5 lin-45 10864 7.082 0.907 0.952 0.907 0.952 0.909 0.761 0.865 0.829 Raf homolog serine/threonine-protein kinase [Source:UniProtKB/Swiss-Prot;Acc:Q07292]
25. C48G7.3 rin-1 9029 7.078 0.919 0.957 0.927 0.957 0.931 0.809 0.890 0.688 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
26. T10G3.5 eea-1 7675 7.075 0.939 0.952 0.942 0.952 0.868 0.695 0.869 0.858 EEA1 (Early Endosome Antigen, Rab effector) homolog [Source:RefSeq peptide;Acc:NP_001024127]
27. T22D1.4 ribo-1 11776 7.074 0.890 0.915 0.908 0.915 0.864 0.956 0.840 0.786 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9GZH4]
28. C26E6.11 mmab-1 4385 7.072 0.842 0.951 0.935 0.951 0.906 0.862 0.751 0.874 MethylMalonic Aciduria type B homolog [Source:RefSeq peptide;Acc:NP_498038]
29. C38C10.5 rgr-1 4146 7.072 0.944 0.951 0.916 0.951 0.919 0.715 0.839 0.837 Mediator of RNA polymerase II transcription subunit 14 [Source:UniProtKB/Swiss-Prot;Acc:Q03570]
30. C38D4.5 tag-325 3143 7.07 0.912 0.965 0.904 0.965 0.926 0.884 0.828 0.686 WW domain-containing protein tag-325 [Source:UniProtKB/Swiss-Prot;Acc:P46941]
31. R10E11.3 usp-46 3909 7.068 0.915 0.959 0.895 0.959 0.912 0.762 0.815 0.851 Ubiquitin carboxyl-terminal hydrolase 46 [Source:UniProtKB/Swiss-Prot;Acc:P34547]
32. Y106G6A.5 dsbn-1 7130 7.067 0.915 0.967 0.875 0.967 0.894 0.815 0.799 0.835 Dysbindin protein homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9XWQ1]
33. Y49A3A.1 cept-2 8916 7.058 0.874 0.970 0.940 0.970 0.901 0.769 0.830 0.804 Choline/EthanolaminePhosphoTransferase [Source:RefSeq peptide;Acc:NP_506558]
34. F59G1.3 vps-35 9577 7.057 0.942 0.962 0.927 0.962 0.854 0.754 0.800 0.856 Vacuolar protein sorting-associated protein 35 [Source:RefSeq peptide;Acc:NP_495180]
35. ZK856.1 cul-5 2894 7.05 0.903 0.962 0.876 0.962 0.861 0.831 0.828 0.827 Cullin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q23639]
36. Y54E5B.1 smp-1 4196 7.04 0.909 0.958 0.903 0.958 0.908 0.774 0.869 0.761 Semaphorin-1A [Source:UniProtKB/Swiss-Prot;Acc:Q17330]
37. PAR2.4 mig-22 12357 7.036 0.950 0.938 0.908 0.938 0.822 0.791 0.797 0.892 Chondroitin sulfate synthase mig-22 [Source:UniProtKB/Swiss-Prot;Acc:P45895]
38. Y69A2AR.2 ric-8 4224 7.035 0.868 0.960 0.858 0.960 0.913 0.722 0.863 0.891 Synembryn [Source:UniProtKB/Swiss-Prot;Acc:Q9GSX9]
39. C35D10.16 arx-6 8242 7.033 0.864 0.960 0.896 0.960 0.877 0.783 0.849 0.844 Probable actin-related protein 2/3 complex subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:P58798]
40. F35G12.3 sel-5 5924 7.029 0.883 0.962 0.921 0.962 0.874 0.769 0.822 0.836 Suppressor/Enhancer of Lin-12 [Source:RefSeq peptide;Acc:NP_001022562]
41. Y57G11C.13 arl-8 26649 7.027 0.875 0.957 0.914 0.957 0.842 0.912 0.785 0.785 ARF-Like [Source:RefSeq peptide;Acc:NP_502791]
42. W10D9.4 nfyb-1 2584 7.027 0.878 0.957 0.896 0.957 0.882 0.709 0.918 0.830 Nuclear transcription Factor Y, B (beta) subunit [Source:RefSeq peptide;Acc:NP_493740]
43. Y105E8B.2 exoc-8 6217 7.025 0.891 0.959 0.933 0.959 0.864 0.892 0.875 0.652 EXOCyst component [Source:RefSeq peptide;Acc:NP_001021702]
44. F45E12.2 brf-1 4667 7.022 0.921 0.971 0.922 0.971 0.906 0.617 0.911 0.803 BRF (transcription factor) homolog [Source:RefSeq peptide;Acc:NP_495526]
45. F29C4.7 grld-1 5426 7.02 0.861 0.952 0.926 0.952 0.863 0.789 0.807 0.870 Glutamate Receptor Level Decreased [Source:RefSeq peptide;Acc:NP_741283]
46. T18H9.7 tag-232 8234 7.018 0.929 0.955 0.952 0.955 0.913 0.754 0.765 0.795
47. C54G10.3 pmp-3 8899 7.012 0.896 0.961 0.877 0.961 0.829 0.788 0.836 0.864 Peroxisomal Membrane Protein related [Source:RefSeq peptide;Acc:NP_001256607]
48. T19C3.8 fem-2 9225 7.012 0.885 0.959 0.935 0.959 0.930 0.711 0.898 0.735 Ca(2+)/calmodulin-dependent protein kinase phosphatase [Source:UniProtKB/Swiss-Prot;Acc:P49594]
49. F57B9.10 rpn-6.1 20218 7.01 0.884 0.953 0.900 0.953 0.787 0.869 0.865 0.799 Probable 26S proteasome regulatory subunit rpn-6.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20938]
50. F59G1.5 ptp-2 7879 7.001 0.907 0.951 0.910 0.951 0.882 0.692 0.858 0.850 Tyrosine-protein phosphatase non-receptor type [Source:RefSeq peptide;Acc:NP_001293512]
51. F53F4.3 tbcb-1 6442 6.998 0.911 0.961 0.901 0.961 0.928 0.687 0.851 0.798 Tubulin-specific chaperone B [Source:UniProtKB/Swiss-Prot;Acc:Q20728]
52. C25D7.7 rap-2 6167 6.997 0.860 0.962 0.845 0.962 0.896 0.803 0.798 0.871 RAP homolog (vertebrate Rap GTPase family) [Source:RefSeq peptide;Acc:NP_506707]
53. C27A2.6 dsh-2 2481 6.994 0.917 0.951 0.921 0.951 0.925 0.643 0.881 0.805 LOW QUALITY PROTEIN: DiSHevelled related [Source:RefSeq peptide;Acc:NP_494937]
54. B0205.9 B0205.9 3651 6.99 0.851 0.953 0.939 0.953 0.944 0.691 0.883 0.776
55. R13A5.1 cup-5 5245 6.989 0.908 0.955 0.875 0.955 0.880 0.764 0.793 0.859 CUP-5L; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q8T666]
56. C26E6.7 eri-9 8069 6.989 0.911 0.957 0.876 0.957 0.956 0.609 0.912 0.811 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_001293626]
57. K02A11.1 gfi-2 8382 6.983 0.891 0.951 0.860 0.951 0.861 0.916 0.773 0.780 GEI-4 (Four) Interacting protein [Source:RefSeq peptide;Acc:NP_492587]
58. F43C1.2 mpk-1 13166 6.979 0.875 0.965 0.923 0.965 0.827 0.777 0.825 0.822 Mitogen-activated protein kinase mpk-1 [Source:UniProtKB/Swiss-Prot;Acc:P39745]
59. C41C4.4 ire-1 5870 6.972 0.900 0.957 0.881 0.957 0.899 0.785 0.745 0.848 Serine/threonine-protein kinase/endoribonuclease ire-1 Serine/threonine-protein kinase Endoribonuclease [Source:UniProtKB/Swiss-Prot;Acc:Q09499]
60. B0285.5 hse-5 6071 6.97 0.889 0.956 0.858 0.956 0.897 0.749 0.886 0.779 D-glucuronyl C5-epimerase [Source:UniProtKB/Swiss-Prot;Acc:P46555]
61. D2013.2 wdfy-2 7286 6.967 0.900 0.962 0.920 0.962 0.892 0.681 0.829 0.821 WD repeat and FYVE domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q18964]
62. K07B1.3 ucp-4 2364 6.965 0.886 0.954 0.828 0.954 0.916 0.746 0.902 0.779 UnCoupling Protein (mitochondrial substrate carrier) [Source:RefSeq peptide;Acc:NP_505414]
63. Y113G7B.24 sld-5 3037 6.958 0.886 0.956 0.901 0.956 0.955 0.635 0.891 0.778 DNA replication complex GINS protein SLD5 [Source:RefSeq peptide;Acc:NP_001256903]
64. K04G2.2 aho-3 15189 6.958 0.901 0.952 0.890 0.952 0.937 0.679 0.884 0.763
65. C53B4.6 nstp-1 2052 6.957 0.840 0.967 0.900 0.967 0.952 0.725 0.883 0.723 Nucleotide Sugar TransPorter family [Source:RefSeq peptide;Acc:NP_001294058]
66. C43E11.10 cdc-6 5331 6.95 0.913 0.958 0.925 0.958 0.856 0.586 0.883 0.871 Cell Division Cycle related [Source:RefSeq peptide;Acc:NP_491343]
67. Y41D4B.19 npp-8 12992 6.949 0.922 0.928 0.950 0.928 0.936 0.617 0.888 0.780 Nuclear Pore complex Protein [Source:RefSeq peptide;Acc:NP_500102]
68. F56D12.6 fcho-1 2176 6.945 0.906 0.976 0.920 0.976 0.830 0.705 0.780 0.852 FCH domain Only (FCH stands for Fes/CIP4 homology domain) [Source:RefSeq peptide;Acc:NP_493947]
69. F56C9.11 F56C9.11 4388 6.943 0.908 0.960 0.909 0.960 0.782 0.852 0.837 0.735
70. D2024.6 cap-1 13880 6.943 0.912 0.953 0.910 0.953 0.791 0.908 0.848 0.668 F-actin-capping protein subunit alpha [Source:UniProtKB/Swiss-Prot;Acc:P34685]
71. ZK792.6 let-60 16967 6.943 0.874 0.950 0.887 0.950 0.827 0.834 0.786 0.835 Ras protein let-60 [Source:UniProtKB/Swiss-Prot;Acc:P22981]
72. D1007.5 D1007.5 7940 6.937 0.851 0.947 0.951 0.947 0.948 0.663 0.849 0.781
73. Y24F12A.2 ragc-1 3950 6.933 0.894 0.952 0.903 0.952 0.885 0.676 0.858 0.813 RAs-related GTP binding protein C homolog [Source:RefSeq peptide;Acc:NP_001293887]
74. T24H10.3 dnj-23 11446 6.931 0.909 0.953 0.894 0.953 0.905 0.646 0.905 0.766 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_495944]
75. F18C12.2 rme-8 5128 6.929 0.882 0.952 0.936 0.952 0.806 0.825 0.870 0.706 Receptor Mediated Endocytosis [Source:RefSeq peptide;Acc:NP_492222]
76. C10C6.5 wht-2 3408 6.929 0.944 0.959 0.915 0.959 0.909 0.542 0.827 0.874 WHiTe (Drosophila) related ABC transporter [Source:RefSeq peptide;Acc:NP_502164]
77. F18A1.6 alfa-1 2325 6.928 0.899 0.951 0.880 0.951 0.888 0.677 0.836 0.846 ALS/FTD Associated gene homolog [Source:RefSeq peptide;Acc:NP_495604]
78. VF36H2L.1 aph-1 3678 6.922 0.882 0.954 0.929 0.954 0.954 0.657 0.890 0.702 Gamma-secretase subunit aph-1 [Source:UniProtKB/Swiss-Prot;Acc:O45876]
79. R11E3.6 eor-1 2839 6.919 0.874 0.971 0.859 0.971 0.772 0.906 0.805 0.761 EOR-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDU4]
80. T22C1.6 T22C1.6 4918 6.918 0.885 0.959 0.867 0.959 0.933 0.651 0.837 0.827
81. C53A5.3 hda-1 18413 6.913 0.899 0.956 0.905 0.956 0.854 0.720 0.895 0.728 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
82. C18E3.2 swsn-2.2 3460 6.909 0.927 0.949 0.911 0.949 0.957 0.564 0.874 0.778 SWI/SNF nucleosome remodeling complex component [Source:RefSeq peptide;Acc:NP_491329]
83. ZK858.4 mel-26 15994 6.907 0.901 0.965 0.845 0.965 0.889 0.870 0.799 0.673 Protein maternal effect lethal 26 [Source:UniProtKB/Swiss-Prot;Acc:Q94420]
84. K04G7.3 ogt-1 8245 6.902 0.896 0.954 0.903 0.954 0.805 0.820 0.754 0.816 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase [Source:UniProtKB/Swiss-Prot;Acc:O18158]
85. Y6D11A.2 arx-4 3777 6.9 0.817 0.956 0.799 0.956 0.873 0.872 0.839 0.788 Probable actin-related protein 2/3 complex subunit 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8WTM6]
86. R74.8 R74.8 7722 6.894 0.893 0.949 0.881 0.949 0.952 0.671 0.926 0.673
87. Y62E10A.11 mdt-9 5971 6.89 0.857 0.964 0.908 0.964 0.935 0.633 0.866 0.763 MeDiaTor [Source:RefSeq peptide;Acc:NP_001255737]
88. F22G12.5 F22G12.5 5456 6.889 0.905 0.957 0.921 0.957 0.873 0.753 0.786 0.737
89. Y49E10.6 his-72 32293 6.884 0.875 0.951 0.912 0.951 0.859 0.730 0.839 0.767 Histone H3.3 type 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U281]
90. C32D5.5 set-4 7146 6.884 0.868 0.962 0.925 0.962 0.828 0.668 0.843 0.828 Histone-lysine N-methyltransferase Suv4-20 [Source:UniProtKB/Swiss-Prot;Acc:Q09265]
91. F59E12.13 fut-3 2309 6.88 0.913 0.951 0.920 0.951 0.915 0.590 0.850 0.790 FUcosyl Transferase [Source:RefSeq peptide;Acc:NP_495106]
92. M01D7.2 scm-1 7724 6.877 0.859 0.902 0.865 0.902 0.822 0.953 0.790 0.784 SCAMP (synaptic vesicle protein) homolog [Source:RefSeq peptide;Acc:NP_001293354]
93. F43G9.5 cfim-1 9169 6.877 0.880 0.952 0.915 0.952 0.946 0.618 0.853 0.761 Cleavage Factor IM (CFIm) homolog [Source:RefSeq peptide;Acc:NP_492334]
94. F52H3.2 mtcu-2 3068 6.877 0.950 0.916 0.888 0.916 0.875 0.672 0.855 0.805 Protein MTO1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20680]
95. F09G2.9 attf-2 14771 6.876 0.912 0.961 0.909 0.961 0.920 0.690 0.886 0.637 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
96. F26H11.2 nurf-1 13015 6.875 0.913 0.952 0.911 0.952 0.829 0.708 0.837 0.773 Nucleosome-remodeling factor subunit NURF301-like [Source:UniProtKB/Swiss-Prot;Acc:Q6BER5]
97. W02B12.8 rga-1 2072 6.872 0.904 0.954 0.944 0.954 0.829 0.814 0.796 0.677 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_001022391]
98. F59E12.11 sam-4 8179 6.871 0.857 0.958 0.910 0.958 0.928 0.680 0.871 0.709
99. T01B7.6 trcs-2 9792 6.868 0.900 0.957 0.907 0.957 0.928 0.691 0.880 0.648 TRansport of membrane to Cell Surface [Source:RefSeq peptide;Acc:NP_495857]
100. T09A12.4 nhr-66 4746 6.866 0.890 0.950 0.888 0.950 0.907 0.735 0.748 0.798 Nuclear Hormone Receptor family [Source:RefSeq peptide;Acc:NP_001294133]

There are 594 more genes with r >= 0.95  Show all


Refine r cutoff to:   

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA