C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T07E3.6

Gene ID Gene Name Reads Transcripts Annotation
T07E3.6 pdf-1 18892 T07E3.6a, T07E3.6b.1, T07E3.6b.2, T07E3.6b.3 PDF (arthropod Pigment Dispersing Factor) homolog [Source:RefSeq peptide;Acc:NP_741206]

Genes with expression patterns similar to T07E3.6

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T07E3.6 pdf-1 18892 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 PDF (arthropod Pigment Dispersing Factor) homolog [Source:RefSeq peptide;Acc:NP_741206]
2. C51E3.7 egl-3 40717 7.006 0.661 0.965 0.913 0.965 0.863 0.978 0.775 0.886 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
3. F01D4.4 egl-21 44229 6.989 0.712 0.939 0.916 0.939 0.857 0.973 0.752 0.901
4. T03D8.3 sbt-1 28089 6.923 0.615 0.964 0.861 0.964 0.901 0.980 0.734 0.904 Seven B Two (mammalian 7BT prohormone convertase chaperone) homolog [Source:RefSeq peptide;Acc:NP_508020]
5. F21F3.1 pgal-1 12290 6.846 0.531 0.968 0.847 0.968 0.878 0.991 0.796 0.867 Probable peptidyl-alpha-hydroxyglycine alpha-amidating lyase F21F3.1 [Source:UniProtKB/Swiss-Prot;Acc:P91268]
6. ZK1320.10 nlp-11 6331 6.466 0.398 0.982 0.825 0.982 0.788 0.982 0.592 0.917 Neuropeptide-like peptide 11 [Source:UniProtKB/Swiss-Prot;Acc:Q09367]
7. T23H2.2 snt-4 8139 6.231 - 0.960 0.839 0.960 0.828 0.987 0.708 0.949 SyNapTotagmin [Source:RefSeq peptide;Acc:NP_491853]
8. C02F12.3 snet-1 7519 6.073 0.354 0.961 0.932 0.961 0.633 0.844 0.656 0.732
9. C25H3.5 flp-27 5578 5.992 - 0.959 0.711 0.959 0.910 0.807 0.666 0.980 FMRFamide-like neuropeptides 27 EASAFGDIIGELKGKGLGGRMRF-amide [Source:UniProtKB/Swiss-Prot;Acc:Q18184]
10. F33D4.3 flp-13 7707 5.796 0.752 0.953 0.692 0.953 0.461 0.949 0.440 0.596 FMRFamide-like neuropeptides 13 SDRPTRAMDSPLIRF-amide AMDSPLIRF-amide AADGAPLIRF-amide 1 APEASPFIRF-amide 1 AADGAPLIRF-amide 2 APEASPFIRF-amide 2 ASPSAPLIRF-amide SPSAVPLIRF-amide SAAAPLIRF-amide ASSAPLIRF-amide [Source:UniProtKB/Swiss-Prot;Acc:O44185]
11. B0244.2 ida-1 6934 5.591 - 0.837 0.542 0.837 0.826 0.970 0.708 0.871 related to Islet cell Diabetes Autoantigen [Source:RefSeq peptide;Acc:NP_498245]
12. K07E1.1 K07E1.1 10145 5.422 0.981 0.032 0.777 0.032 0.824 0.995 0.864 0.917 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09407]
13. Y116F11B.1 daf-28 5856 5.314 0.257 0.968 0.637 0.968 0.686 0.998 0.543 0.257
14. F36H12.1 nlp-47 7497 5.292 0.649 0.332 0.602 0.332 0.769 0.953 0.856 0.799 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_500770]
15. CC4.2 nlp-15 6587 5.272 0.174 0.481 0.707 0.481 0.860 0.952 0.680 0.937 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_493278]
16. F37A8.4 nlp-10 4883 5.17 0.145 0.740 0.104 0.740 0.863 0.982 0.793 0.803 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_497795]
17. F39H2.1 flp-22 10810 5.166 - 0.937 0.736 0.937 0.209 0.984 0.645 0.718 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_492344]
18. C17D12.2 unc-75 1549 5.158 - 0.968 - 0.968 0.726 0.921 0.675 0.900 Putative RNA-binding protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EE68]
19. C03G5.7 flp-5 6051 5.091 - 0.576 0.818 0.576 0.688 0.964 0.564 0.905 FMRFamide-like neuropeptides 5 APKPKFIRF-amide AGAKFIRF-amide GAKFIRF-amide [Source:UniProtKB/Swiss-Prot;Acc:O61466]
20. F07D3.2 flp-6 6185 5.07 0.099 0.772 0.633 0.772 0.359 0.984 0.516 0.935 FMRFamide-like neuropeptides 6 QQDSEVEREMM KSAYMRF-amide 1 KSAYMRF-amide 2 KSAYMRF-amide 3 KSAYMRF-amide 4 KSAYMRF-amide 5 KSAYMRF-amide 6 [Source:UniProtKB/Swiss-Prot;Acc:Q19165]
21. T27E4.1 T27E4.1 0 5.053 0.734 - 0.857 - 0.857 0.975 0.710 0.920
22. T23F11.3 cdka-1 1453 5.011 - 0.867 - 0.867 0.861 0.954 0.625 0.837 Cyclin-dependent kinase 5 activator 1 [Source:UniProtKB/Swiss-Prot;Acc:Q22695]
23. F48C11.3 nlp-3 8726 4.945 0.612 0.962 0.624 0.962 0.138 0.862 0.546 0.239 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_510187]
24. F58E10.7 droe-4 6061 4.778 - 0.960 0.452 0.960 0.823 0.859 0.363 0.361 dietary restriction over expressed [Source:RefSeq peptide;Acc:NP_506477]
25. C18D1.3 flp-4 5020 4.636 - 0.485 0.471 0.485 0.766 0.986 0.519 0.924 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_496173]
26. ZC334.2 ins-30 5202 4.494 0.309 0.896 0.650 0.896 0.285 0.986 0.214 0.258 INSulin related [Source:RefSeq peptide;Acc:NP_493444]
27. R102.2 R102.2 16144 4.336 - 0.970 - 0.970 0.372 0.835 0.522 0.667
28. F09E5.16 F09E5.16 7847 4.278 -0.107 0.950 - 0.950 0.310 0.776 0.715 0.684
29. F31F6.4 flp-8 1797 4.22 0.224 0.961 - 0.961 0.223 0.942 - 0.909 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_741934]
30. F17C11.4 F17C11.4 1679 4.209 0.332 -0.166 0.861 -0.166 0.697 0.968 0.726 0.957
31. E02A10.4 E02A10.4 1677 4.18 - 0.943 - 0.943 - 0.973 0.430 0.891
32. Y71G12B.4 pghm-1 4603 4.173 - - 0.820 - 0.873 0.982 0.649 0.849 Probable peptidylglycine alpha-hydroxylating monooxygenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q95XM2]
33. C01F4.2 rga-6 889 4.079 - 0.873 - 0.873 - 0.982 0.477 0.874 Rho GTPase Activating protein [Source:RefSeq peptide;Acc:NP_491465]
34. F14D12.4 mec-2 1478 3.919 - 0.801 - 0.801 - 0.866 0.497 0.954 Mechanosensory protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q27433]
35. Y15E3A.3 Y15E3A.3 0 3.865 - - 0.906 - 0.728 0.971 0.549 0.711
36. ZK84.6 ins-6 2861 3.863 - 0.768 0.646 0.768 0.221 0.990 0.282 0.188 Probable insulin-like peptide beta-type 5 [Source:UniProtKB/Swiss-Prot;Acc:P56174]
37. C15C8.1 xbx-9 1577 3.863 - 0.965 0.185 0.965 - 0.913 0.488 0.347 X-BoX promoter element regulated [Source:RefSeq peptide;Acc:NP_506183]
38. F41B4.3 F41B4.3 0 3.712 - - 0.676 - 0.444 0.992 0.889 0.711
39. F09E10.1 F09E10.1 15131 3.695 - -0.055 0.756 -0.055 0.828 0.988 0.615 0.618
40. C05E11.8 flp-12 7392 3.693 0.216 0.319 0.530 0.319 0.260 0.690 0.391 0.968 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_508789]
41. ZK682.7 ZK682.7 0 3.534 0.111 - 0.291 - 0.660 0.951 0.632 0.889
42. F58H10.1 F58H10.1 891 3.429 - -0.076 0.445 -0.076 0.746 0.914 0.517 0.959
43. D2096.10 D2096.10 1917 3.421 - - 0.444 - 0.804 0.991 0.536 0.646
44. C04H5.8 nlp-41 2254 3.233 - - 0.587 - 0.478 0.981 0.772 0.415 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001021917]
45. ZC334.1 ins-26 624 3.122 - 0.964 - 0.964 - 0.933 - 0.261 INSulin related [Source:RefSeq peptide;Acc:NP_493445]
46. Y17G7B.23 Y17G7B.23 1222 3.115 - - - - 0.706 0.984 0.705 0.720
47. F08H9.2 F08H9.2 7991 3.089 - -0.094 - -0.094 0.685 0.998 0.844 0.750
48. T07G12.1 cal-4 1676 3.077 - - - - 0.683 0.962 0.526 0.906 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_001255491]
49. T04C12.7 T04C12.7 207 2.925 - - 0.589 - 0.101 0.969 0.600 0.666
50. C30G4.3 gcy-11 713 2.923 - 0.959 - 0.959 - 0.773 - 0.232 Receptor-type guanylate cyclase gcy-11 [Source:UniProtKB/Swiss-Prot;Acc:Q18331]
51. F09F3.5 F09F3.5 0 2.905 - - -0.035 - 0.598 0.969 0.563 0.810
52. H11E01.2 H11E01.2 0 2.86 - - - - 0.513 0.957 0.547 0.843
53. F14D7.13 F14D7.13 0 2.778 - - - - 0.261 0.984 0.855 0.678
54. C50H11.13 C50H11.13 0 2.646 - - - - 0.713 0.970 0.803 0.160
55. F25C8.3 unc-80 1521 2.489 - - - - 0.485 0.534 0.499 0.971
56. F10E7.11 F10E7.11 0 2.472 - - - - - 0.961 0.687 0.824
57. F54G2.2 F54G2.2 0 2.429 - - - - - 0.954 0.635 0.840
58. R13A5.10 R13A5.10 1510 2.426 - - - - - 0.908 0.540 0.978
59. F13G3.3 F13G3.3 0 2.419 - - - - 0.170 0.972 0.412 0.865 UPF0392 protein F13G3.3 [Source:UniProtKB/Swiss-Prot;Acc:Q19417]
60. Y41C4A.18 Y41C4A.18 3373 2.369 - - - - - 0.969 0.652 0.748
61. F42H10.2 F42H10.2 2068 2.346 - -0.153 - -0.153 - 0.984 0.865 0.803
62. C54A12.4 drn-1 597 2.32 - - - - - 0.957 0.530 0.833 Di-Ras/Rig/Noey2 Ras-like protein homolog [Source:RefSeq peptide;Acc:NP_494989]
63. C27H5.1 pdl-1 261 2.291 - - - - 0.595 0.980 0.716 - Phosphodiesterase delta-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q18268]
64. C48D1.3 cho-1 681 2.272 - - - - - 0.972 0.554 0.746 High-affinity choline transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:O02228]
65. F01D4.3 F01D4.3 397 2.247 -0.092 - 0.268 - 0.074 0.985 0.337 0.675
66. M02F4.1 M02F4.1 0 2.19 - - - - 0.138 0.998 0.352 0.702
67. C30A5.3 C30A5.3 16475 2.135 - -0.141 - -0.141 - 0.953 0.554 0.910
68. ZC334.3 ins-24 1701 2.113 - - 0.622 - 0.238 0.994 - 0.259 INSulin related [Source:RefSeq peptide;Acc:NP_493443]
69. F28H1.1 F28H1.1 891 2.041 - -0.062 - -0.062 - 0.952 0.527 0.686
70. ZK1321.2 shk-1 756 1.972 - - - - 0.343 0.679 - 0.950 Potassium voltage-gated channel protein shk-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8I4B0]
71. K07D4.9 K07D4.9 5767 1.966 - 0.983 - 0.983 - - - -
72. Y9C2UA.1 Y9C2UA.1 2785 1.906 - 0.953 - 0.953 - - - -
73. T27C4.1 T27C4.1 27071 1.9 - 0.950 - 0.950 - - - -
74. T01C4.2 odr-2 282 1.851 - - - - - 0.967 - 0.884 Ly-6-related protein ODR-2 isoform 2b; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9BMI0]
75. C18A11.3 C18A11.3 1071 1.819 - - - - - 0.991 0.828 -
76. K07F5.6 K07F5.6 430 1.756 - - - - - 0.959 - 0.797
77. C13D9.7 ncx-8 349 1.654 - - - - 0.683 0.971 - - Na/Ca eXchangers [Source:RefSeq peptide;Acc:NP_504341]
78. Y48B6A.8 ace-3 71 1.628 - - - - - 0.969 - 0.659 Carboxylic ester hydrolase [Source:RefSeq peptide;Acc:NP_496963]
79. B0491.8 clh-2 171 1.573 - - - - - 0.977 0.596 - Chloride channel protein [Source:RefSeq peptide;Acc:NP_001021901]
80. T27E9.9 acc-4 132 1.435 - - - - - 0.959 0.476 - Acetylcholine-gated Chloride Channel [Source:RefSeq peptide;Acc:NP_499789]
81. C09C7.1 zig-4 205 1.415 - - - - - 0.973 0.442 - 2 (Zwei) IG domain protein [Source:RefSeq peptide;Acc:NP_509335]
82. ZK75.3 ins-3 86 0.998 - - - - - 0.998 - - Probable insulin-like peptide beta-type 3 [Source:UniProtKB/Swiss-Prot;Acc:Q09628]
83. C39E9.10 spin-2 55 0.997 - - - - - 0.997 - - SPINster (Drosophila lysosomal permease) homolog [Source:RefSeq peptide;Acc:NP_502513]
84. R12H7.4 R12H7.4 0 0.996 - - - - - 0.996 - -
85. K01A12.3 K01A12.3 0 0.995 - - - - - 0.995 - - Probable G-protein coupled receptor K01A12.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10042]
86. F58A6.5 F58A6.5 1415 0.995 - - - - - 0.995 - -
87. M04D8.3 ins-23 0 0.993 - - - - - 0.993 - - Probable insulin-like peptide alpha-type 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21506]
88. F53B1.4 F53B1.4 0 0.992 - - - - - 0.992 - -
89. C06E4.7 glb-2 0 0.99 - - - - - 0.990 - - GLoBin related [Source:RefSeq peptide;Acc:NP_501157]
90. C05D10.4 C05D10.4 512 0.99 - - - - - 0.990 - -
91. M04D8.8 M04D8.8 0 0.989 - - - - - 0.989 - -
92. C18C4.9 glb-6 0 0.985 - - - - - 0.985 - - Globin-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q18086]
93. C35E7.3 C35E7.3 0 0.984 - - - - - 0.984 - -
94. Y48B6A.9 hot-7 0 0.98 - - - - - 0.980 - - Homolog of Odr-2 (Two) [Source:RefSeq peptide;Acc:NP_496964]
95. B0303.16 B0303.16 0 0.979 - - - - - 0.979 - -
96. R02F11.3 R02F11.3 1352 0.979 - - - - - 0.979 - -
97. ZC239.4 ZC239.4 0 0.975 - - - - - 0.975 - -
98. ZC64.4 lim-4 0 0.975 - - - - - 0.975 - - LIM domain family [Source:RefSeq peptide;Acc:NP_508669]
99. D1073.1 trk-1 0 0.974 - - - - - 0.974 - - TRK (vertebrate neurotrophin receptor tyrosine kinase) homolog [Source:RefSeq peptide;Acc:NP_001076758]
100. Y105C5A.23 daf-38 215 0.973 - - - - - 0.973 - -

There are 17 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA