C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for T03G6.2

Gene ID Gene Name Reads Transcripts Annotation
T03G6.2 nhr-40 3291 T03G6.2a, T03G6.2b, T03G6.2c Nuclear hormone receptor family member nhr-40 [Source:UniProtKB/Swiss-Prot;Acc:Q22127]

Genes with expression patterns similar to T03G6.2

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. T03G6.2 nhr-40 3291 7 1.000 1.000 - 1.000 1.000 1.000 1.000 1.000 Nuclear hormone receptor family member nhr-40 [Source:UniProtKB/Swiss-Prot;Acc:Q22127]
2. T12F5.4 lin-59 5187 5.352 0.736 0.893 - 0.893 0.519 0.960 0.605 0.746 Probable histone-lysine N-methyltransferase lin-59 [Source:UniProtKB/Swiss-Prot;Acc:O44757]
3. K11C4.3 unc-70 23505 5.02 0.341 0.654 - 0.654 0.754 0.963 0.822 0.832 Beta-G spectrin; Beta-spectrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG85]
4. ZC504.4 mig-15 3844 5.005 0.695 0.751 - 0.751 0.581 0.973 0.594 0.660 Serine/threonine-protein kinase mig-15 [Source:UniProtKB/Swiss-Prot;Acc:Q23356]
5. F46H6.2 dgk-2 4591 4.986 0.319 0.730 - 0.730 0.674 0.953 0.778 0.802 Diacylglycerol kinase [Source:RefSeq peptide;Acc:NP_001024679]
6. T05A10.1 sma-9 3815 4.924 0.609 0.796 - 0.796 0.289 0.960 0.608 0.866 SMAll [Source:RefSeq peptide;Acc:NP_741897]
7. B0001.6 eri-12 6103 4.783 0.579 0.719 - 0.719 0.590 0.960 0.498 0.718 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_502310]
8. R10E9.1 msi-1 17734 4.756 0.218 0.667 - 0.667 0.666 0.954 0.744 0.840 MuSashI (fly neural) family [Source:RefSeq peptide;Acc:NP_497799]
9. K08B12.2 dmd-7 8569 4.743 0.476 0.687 - 0.687 0.705 0.956 0.579 0.653 DM (Doublesex/MAB-3) Domain family [Source:RefSeq peptide;Acc:NP_741551]
10. K11E8.1 unc-43 25109 4.695 0.352 0.648 - 0.648 0.570 0.968 0.746 0.763 Calcium/calmodulin-dependent protein kinase type II [Source:RefSeq peptide;Acc:NP_001023293]
11. R06A10.2 gsa-1 26038 4.635 0.307 0.566 - 0.566 0.673 0.973 0.841 0.709 G protein, Subunit Alpha [Source:RefSeq peptide;Acc:NP_490817]
12. M04G12.4 somi-1 4389 4.571 0.307 0.730 - 0.730 0.594 0.950 0.637 0.623 Suppressor of Overexpressed MIcro-RNA [Source:RefSeq peptide;Acc:NP_506320]
13. E01F3.1 pde-3 1644 4.535 0.761 0.560 - 0.560 - 0.956 0.777 0.921 Probable 3',5'-cyclic phosphodiesterase pde-3 [Source:UniProtKB/Swiss-Prot;Acc:Q8I0P7]
14. R02E12.2 mop-25.1 8263 4.526 0.522 0.656 - 0.656 0.584 0.966 0.456 0.686 MO25 (MOuse embryo scaffolding Protein) homolog [Source:RefSeq peptide;Acc:NP_001024819]
15. C33A11.1 nbid-1 7523 4.464 0.253 0.519 - 0.519 0.568 0.958 0.758 0.889 Nuclear Factor of Kappa light polypeptide gene enhancer in b(B)-cells n [Source:RefSeq peptide;Acc:NP_510540]
16. Y48E1B.10 gst-20 13640 4.398 0.531 0.342 - 0.342 0.806 0.956 0.653 0.768 Glutathione S-Transferase [Source:RefSeq peptide;Acc:NP_496858]
17. B0350.2 unc-44 46451 4.345 0.119 0.511 - 0.511 0.667 0.963 0.691 0.883 AO66 ankyrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECZ1]
18. F43G6.10 F43G6.10 987 4.277 - 0.848 - 0.848 0.418 0.951 0.596 0.616
19. R07E4.6 kin-2 28939 4.276 0.245 0.481 - 0.481 0.682 0.975 0.617 0.795 cAMP-dependent protein kinase regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:P30625]
20. B0545.1 tpa-1 7067 4.099 0.216 0.438 - 0.438 0.732 0.960 0.618 0.697 Protein kinase C-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34722]
21. M01D7.7 egl-30 21957 4.089 0.229 0.560 - 0.560 0.613 0.955 0.456 0.716 EGL-30; Heterotrimeric G protein alpha subunit; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGU1]
22. Y44A6D.3 Y44A6D.3 2473 4.089 0.019 0.475 - 0.475 0.648 0.689 0.827 0.956
23. C28H8.6 pxl-1 9939 4.068 0.193 0.338 - 0.338 0.719 0.955 0.765 0.760 Paxillin homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:Q09476]
24. T14A8.1 ric-3 2783 4.029 - 0.428 - 0.428 0.773 0.958 0.618 0.824 Resistance to inhibitors of cholinesterase protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q22472]
25. Y39G10AR.15 Y39G10AR.15 1487 4.014 0.466 0.427 - 0.427 0.356 0.967 0.597 0.774
26. Y37E11AR.2 siah-1 2087 4.012 - 0.686 - 0.686 0.468 0.950 0.539 0.683 E3 ubiquitin-protein ligase siah-1 [Source:UniProtKB/Swiss-Prot;Acc:Q965X6]
27. T22H6.6 gei-3 11546 4.006 0.081 0.503 - 0.503 0.515 0.968 0.618 0.818 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_001076772]
28. T06D10.1 rsbp-1 6760 3.929 0.090 0.326 - 0.326 0.764 0.974 0.635 0.814 R-Seven Binding Protein (R7BP) homolog [Source:RefSeq peptide;Acc:NP_492439]
29. F11A6.1 kpc-1 2689 3.756 - 0.474 - 0.474 0.640 0.957 0.352 0.859 Furin-like protease kpc-1 [Source:RefSeq peptide;Acc:NP_492974]
30. C31H5.5 C31H5.5 0 3.716 0.766 - - - 0.504 0.951 0.608 0.887
31. K03E6.6 pfn-3 9595 3.628 0.076 0.374 - 0.374 0.661 0.957 0.474 0.712 Profilin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q21193]
32. ZK682.7 ZK682.7 0 3.512 0.377 - - - 0.703 0.660 0.817 0.955
33. F38E9.6 F38E9.6 2175 3.436 0.365 - - - 0.757 0.973 0.594 0.747
34. T10B10.8 T10B10.8 405 3.416 0.111 - - - 0.766 0.704 0.879 0.956
35. W03H9.1 W03H9.1 0 3.346 -0.160 - - - 0.831 0.816 0.902 0.957
36. ZK1073.2 ZK1073.2 1791 3.318 0.371 - - - 0.610 0.951 0.635 0.751
37. W05B10.3 W05B10.3 596 3.192 -0.011 - - - 0.747 0.972 0.814 0.670
38. C30G7.3 C30G7.3 1576 3.145 - - - - 0.616 0.749 0.830 0.950
39. F07D3.2 flp-6 6185 3.124 -0.121 0.166 - 0.166 0.553 0.519 0.887 0.954 FMRFamide-like neuropeptides 6 QQDSEVEREMM KSAYMRF-amide 1 KSAYMRF-amide 2 KSAYMRF-amide 3 KSAYMRF-amide 4 KSAYMRF-amide 5 KSAYMRF-amide 6 [Source:UniProtKB/Swiss-Prot;Acc:Q19165]
40. ZC416.1 madf-9 1470 2.888 0.507 0.709 - 0.709 - 0.963 - - MADF domain transcription factor [Source:RefSeq peptide;Acc:NP_500389]
41. M176.10 M176.10 7709 2.836 - - - - 0.657 0.967 0.642 0.570
42. F14B4.1 F14B4.1 0 2.835 -0.199 - - - 0.645 0.957 0.593 0.839
43. T07D1.3 T07D1.3 0 2.77 - - - - 0.520 0.962 0.638 0.650
44. F26F12.4 F26F12.4 0 2.725 -0.105 - - - 0.503 0.870 0.505 0.952
45. ZK867.1 syd-9 877 2.567 - - - - - 0.762 0.855 0.950
46. T28F2.3 cah-6 888 2.49 - - - - - 0.718 0.818 0.954 Carbonic AnHydrase [Source:RefSeq peptide;Acc:NP_491189]
47. C09B7.1 ser-7 418 2.427 - - - - - 0.812 0.655 0.960 SERotonin/octopamine receptor family [Source:RefSeq peptide;Acc:NP_741730]
48. T26E3.2 ndx-1 232 1.844 - - - - - 0.957 - 0.887 Putative nudix hydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:O45830]
49. D1086.9 D1086.9 0 1.81 - - - - - - 0.855 0.955
50. F47G4.5 F47G4.5 0 0.95 - - - - - 0.950 - -

Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA