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Results for R160.1

Gene ID Gene Name Reads Transcripts Annotation
R160.1 dpy-23 2846 R160.1a, R160.1b AP-2 complex subunit mu [Source:UniProtKB/Swiss-Prot;Acc:P35603]

Genes with expression patterns similar to R160.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R160.1 dpy-23 2846 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 AP-2 complex subunit mu [Source:UniProtKB/Swiss-Prot;Acc:P35603]
2. T01C8.1 aak-2 5650 7.011 0.939 0.922 0.925 0.922 0.705 0.950 0.809 0.839 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZQ4]
3. T04C10.2 epn-1 7689 6.879 0.870 0.869 0.932 0.869 0.680 0.968 0.843 0.848 EPsiN (endocytic protein) homolog [Source:RefSeq peptide;Acc:NP_510459]
4. C14F5.5 sem-5 4488 6.877 0.888 0.944 0.901 0.944 0.710 0.955 0.779 0.756 Sex muscle abnormal protein 5 [Source:UniProtKB/Swiss-Prot;Acc:P29355]
5. K09A9.2 rab-14 5898 6.739 0.828 0.892 0.874 0.892 0.660 0.953 0.788 0.852 RAB family [Source:RefSeq peptide;Acc:NP_510572]
6. F46F2.2 kin-20 7883 6.724 0.814 0.904 0.883 0.904 0.567 0.964 0.845 0.843 Casein kinase I isoform delta [Source:UniProtKB/Swiss-Prot;Acc:Q20471]
7. D1005.1 acly-1 8877 6.712 0.889 0.886 0.904 0.886 0.556 0.965 0.765 0.861 Probable ATP-citrate synthase [Source:UniProtKB/Swiss-Prot;Acc:P53585]
8. T12F5.4 lin-59 5187 6.485 0.868 0.812 0.850 0.812 0.646 0.967 0.792 0.738 Probable histone-lysine N-methyltransferase lin-59 [Source:UniProtKB/Swiss-Prot;Acc:O44757]
9. R03G5.2 sek-1 4194 6.473 0.760 0.862 0.796 0.862 0.692 0.958 0.819 0.724 Dual specificity mitogen-activated protein kinase kinase sek-1 [Source:UniProtKB/Swiss-Prot;Acc:G5EDF7]
10. C50F4.5 his-41 14268 6.467 0.756 0.827 0.778 0.827 0.745 0.950 0.733 0.851 Probable histone H2B 3 [Source:UniProtKB/Swiss-Prot;Acc:Q27484]
11. M02A10.3 sli-1 2276 6.466 0.869 0.844 0.836 0.844 0.637 0.951 0.711 0.774 Suppressor of LIneage defect [Source:RefSeq peptide;Acc:NP_508145]
12. Y71G12A.3 tub-2 4497 6.423 0.833 0.700 0.811 0.700 0.752 0.954 0.832 0.841 TUBby-related [Source:RefSeq peptide;Acc:NP_001293352]
13. W06B11.2 puf-9 3321 6.417 0.912 0.841 0.884 0.841 0.658 0.953 0.603 0.725 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_508980]
14. C14F11.1 got-2.2 16386 6.377 0.769 0.857 0.772 0.857 0.601 0.951 0.736 0.834 Aspartate aminotransferase [Source:RefSeq peptide;Acc:NP_741810]
15. K10D3.2 unc-14 6133 6.371 0.668 0.819 0.857 0.819 0.664 0.960 0.814 0.770 UNC-14; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECQ1]
16. B0563.4 tmbi-4 7067 6.359 0.598 0.838 0.747 0.838 0.665 0.964 0.888 0.821 Transmembrane BAX inhibitor motif-containing protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q11080]
17. C29F9.7 pat-4 4885 6.322 0.664 0.824 0.799 0.824 0.673 0.956 0.747 0.835 Integrin-linked protein kinase homolog pat-4 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZC4]
18. K11E8.1 unc-43 25109 6.179 0.669 0.745 0.778 0.745 0.622 0.955 0.826 0.839 Calcium/calmodulin-dependent protein kinase type II [Source:RefSeq peptide;Acc:NP_001023293]
19. F08B6.2 gpc-2 29938 6.135 0.631 0.794 0.784 0.794 0.541 0.952 0.759 0.880 G Protein, Gamma subunit [Source:RefSeq peptide;Acc:NP_491935]
20. R07E4.5 R07E4.5 1033 6.096 0.508 0.819 0.599 0.819 0.681 0.962 0.780 0.928
21. C05G5.4 sucl-1 31709 6.077 0.651 0.757 0.696 0.757 0.695 0.956 0.778 0.787 Probable succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53596]
22. B0001.6 eri-12 6103 5.935 0.662 0.819 0.731 0.819 0.502 0.972 0.703 0.727 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_502310]
23. C01B12.2 gmeb-1 2053 5.886 0.551 0.754 0.923 0.754 0.480 0.960 0.640 0.824 GMEB (Glucocorticoid Modulatory Element Binding protein) transcriptional regulator homolog [Source:RefSeq peptide;Acc:NP_493634]
24. F46H6.2 dgk-2 4591 5.852 0.575 0.820 0.581 0.820 0.538 0.959 0.774 0.785 Diacylglycerol kinase [Source:RefSeq peptide;Acc:NP_001024679]
25. ZK470.5 nck-1 2444 5.687 0.870 0.854 0.853 0.854 0.580 0.950 0.726 - NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family [Source:RefSeq peptide;Acc:NP_508706]
26. F25H2.2 snx-27 2165 5.637 - 0.830 0.857 0.830 0.576 0.958 0.749 0.837 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492758]
27. M03F4.7 calu-1 11150 5.627 0.532 0.777 0.578 0.777 0.702 0.965 0.620 0.676 CALUmenin (calcium-binding protein) homolog [Source:RefSeq peptide;Acc:NP_001024806]
28. R03E1.1 sym-4 2393 5.576 0.785 0.868 0.800 0.868 0.743 0.951 - 0.561 SYM-4; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEV4]
29. F52E4.8 ztf-13 1373 5.476 0.841 0.744 0.814 0.744 0.722 0.959 0.652 - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_508531]
30. C18D11.3 C18D11.3 3750 5.456 0.426 0.716 0.437 0.716 0.694 0.958 0.707 0.802
31. R11A5.4 pck-2 55256 5.453 0.591 0.690 0.521 0.690 0.626 0.953 0.638 0.744 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
32. C29H12.2 C29H12.2 11018 5.45 0.480 0.824 0.236 0.824 0.712 0.961 0.660 0.753
33. Y39A3CL.5 clp-4 3484 5.416 0.440 0.792 0.515 0.792 0.545 0.951 0.692 0.689 CaLPain family [Source:RefSeq peptide;Acc:NP_497460]
34. C18A11.7 dim-1 110263 5.346 0.479 0.528 0.594 0.528 0.718 0.963 0.736 0.800 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
35. Y8G1A.2 inx-13 9263 5.322 0.560 0.542 0.455 0.542 0.661 0.957 0.744 0.861 Innexin [Source:RefSeq peptide;Acc:NP_491212]
36. C14H10.2 C14H10.2 983 5.251 0.484 0.578 0.425 0.578 0.637 0.955 0.764 0.830
37. F45E1.6 his-71 6187 5.246 0.628 0.443 0.468 0.443 0.601 0.958 0.820 0.885 Histone H3.3 type 1 [Source:UniProtKB/Swiss-Prot;Acc:Q10453]
38. R07E4.6 kin-2 28939 5.241 0.435 0.555 0.465 0.555 0.687 0.952 0.780 0.812 cAMP-dependent protein kinase regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:P30625]
39. R03G5.1 eef-1A.2 15061 5.236 0.515 0.600 0.496 0.600 0.506 0.951 0.721 0.847 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
40. R09F10.4 inx-5 7528 5.232 0.597 0.667 0.347 0.667 0.561 0.964 0.696 0.733 Innexin-5 [Source:UniProtKB/Swiss-Prot;Acc:Q23027]
41. K02H8.1 mbl-1 5186 5.209 0.477 0.493 0.365 0.493 0.766 0.960 0.816 0.839 Muscleblind-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94250]
42. F09B9.2 unc-115 18081 5.204 0.487 0.497 0.452 0.497 0.688 0.967 0.726 0.890 Putative actin-binding protein UNC-115 [Source:UniProtKB/TrEMBL;Acc:O77133]
43. R148.6 heh-1 40904 5.179 0.489 0.480 0.528 0.480 0.654 0.963 0.740 0.845 Putative protein heh-1 [Source:UniProtKB/Swiss-Prot;Acc:O17271]
44. F25H5.1 lim-9 21300 5.176 0.483 0.594 0.337 0.594 0.738 0.950 0.659 0.821 LIM domain family [Source:RefSeq peptide;Acc:NP_001025228]
45. F53C11.8 swan-1 1974 5.164 0.856 0.842 0.902 0.842 - 0.953 0.769 - Seven WD repeats, AN11 family [Source:RefSeq peptide;Acc:NP_506418]
46. Y34B4A.9 Y34B4A.9 5325 5.07 0.886 0.492 0.906 0.492 0.708 0.960 - 0.626
47. B0416.7 B0416.7 852 5.041 0.916 - 0.881 - 0.680 0.958 0.770 0.836
48. Y105C5B.28 gln-3 27333 5.028 0.469 0.687 0.476 0.687 0.629 0.967 0.459 0.654 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_001255883]
49. M03F4.2 act-4 354219 4.897 0.430 0.495 0.571 0.495 0.394 0.960 0.805 0.747 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
50. F56B6.4 gyg-1 39789 4.895 0.489 0.303 0.583 0.303 0.688 0.971 0.786 0.772 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
51. F34H10.4 F34H10.4 0 4.842 0.833 - 0.627 - 0.722 0.960 0.798 0.902
52. Y73F8A.6 ccg-1 16283 4.749 0.445 0.479 0.287 0.479 0.692 0.964 0.564 0.839 Conserved Cysteine/Glycine domain protein [Source:RefSeq peptide;Acc:NP_502842]
53. C35C5.8 C35C5.8 0 4.727 0.856 - 0.818 - 0.607 0.963 0.707 0.776
54. F25H2.1 tli-1 1244 4.595 0.784 - 0.831 - 0.694 0.971 0.585 0.730 ToLlIp homolog [Source:RefSeq peptide;Acc:NP_492757]
55. K07E3.2 K07E3.2 129 4.548 - 0.643 0.857 0.643 0.676 0.958 - 0.771
56. F33C8.3 tsp-8 4074 4.546 0.232 0.405 0.535 0.405 0.519 0.970 0.628 0.852 Tetraspanin [Source:RefSeq peptide;Acc:NP_510445]
57. T20B3.1 T20B3.1 369 4.545 0.832 - 0.904 - 0.455 0.950 0.555 0.849
58. C15H9.5 C15H9.5 442 4.539 0.860 - 0.929 - 0.679 0.955 0.452 0.664
59. C03G6.19 srp-6 5642 4.486 0.450 0.337 0.307 0.337 0.457 0.957 0.782 0.859 SeRPin [Source:RefSeq peptide;Acc:NP_504890]
60. F19B2.5 F19B2.5 13609 4.381 0.866 0.144 0.823 0.144 0.594 0.951 - 0.859
61. K08A8.3 coh-1 732 4.347 0.843 0.836 0.871 0.836 - 0.961 - - COHesin family [Source:RefSeq peptide;Acc:NP_509262]
62. T09B9.5 T09B9.5 0 4.219 0.891 - 0.901 - 0.716 0.951 - 0.760
63. F42G2.2 F42G2.2 0 4.214 0.537 - 0.517 - 0.590 0.967 0.828 0.775
64. F02E8.3 aps-2 545 4.003 0.869 0.726 - 0.726 - 0.962 - 0.720 AdaPtin, Small chain (clathrin associated complex) [Source:RefSeq peptide;Acc:NP_508767]
65. F15E6.2 lgc-22 4632 3.965 0.364 0.248 0.096 0.248 0.608 0.961 0.589 0.851 Ligand-Gated ion Channel [Source:RefSeq peptide;Acc:NP_001255260]
66. K09G1.2 K09G1.2 1161 3.903 0.426 - 0.294 - 0.681 0.955 0.721 0.826
67. K02F3.12 K02F3.12 0 3.903 0.372 - 0.445 - 0.627 0.953 0.643 0.863 Putative ATP-dependent DNA helicase Q1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXJ8]
68. C35B1.7 C35B1.7 264 3.823 0.432 - 0.368 - 0.662 0.951 0.596 0.814
69. T13F3.7 T13F3.7 397 3.71 0.478 - 0.416 - 0.483 0.968 0.590 0.775
70. ZK154.1 ZK154.1 0 3.664 0.318 - 0.285 - 0.592 0.957 0.663 0.849
71. F21C10.11 F21C10.11 962 3.509 0.448 - - - 0.566 0.961 0.760 0.774
72. K08B4.6 cpi-1 10903 3.509 0.437 0.261 0.118 0.261 0.609 0.950 0.446 0.427 Cysteine Protease Inhibitor [Source:RefSeq peptide;Acc:NP_500915]
73. R11G11.3 R11G11.3 0 3.23 - - - - 0.648 0.952 0.857 0.773
74. F01G10.8 daf-14 1458 3.214 - - 0.803 - - 0.959 0.637 0.815 Smad protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEP2]
75. K10D6.3 K10D6.3 194 2.661 - - - - 0.390 0.952 0.697 0.622
76. C49C3.5 ceh-88 449 2.49 - - - - 0.720 0.956 - 0.814 C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_503081]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA