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Results for R153.1

Gene ID Gene Name Reads Transcripts Annotation
R153.1 pde-4 6323 R153.1a, R153.1b, R153.1c, R153.1d, R153.1e, R153.1f, R153.1g, R153.1h Probable 3',5'-cyclic phosphodiesterase pde-4 [Source:UniProtKB/Swiss-Prot;Acc:Q22000]

Genes with expression patterns similar to R153.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R153.1 pde-4 6323 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Probable 3',5'-cyclic phosphodiesterase pde-4 [Source:UniProtKB/Swiss-Prot;Acc:Q22000]
2. F55C12.1 rfip-1 11880 6.503 0.868 0.727 0.483 0.727 0.963 0.971 0.865 0.899 Rab-11 Family Interacting-Protein [Source:RefSeq peptide;Acc:NP_495176]
3. F27D4.5 tag-173 13676 6.225 0.877 0.772 0.549 0.772 0.957 0.940 0.624 0.734
4. ZK1127.10 cth-2 34201 6.19 0.772 0.735 0.521 0.735 0.901 0.956 0.738 0.832 Putative cystathionine gamma-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P55216]
5. F07C3.4 glo-4 4468 5.769 0.906 0.633 0.522 0.633 0.956 0.848 0.665 0.606 X-linked retinitis pigmentosa GTPase regulator homolog [Source:UniProtKB/Swiss-Prot;Acc:Q5DX34]
6. T07C4.9 nex-2 7082 5.699 0.794 0.535 0.482 0.535 0.895 0.964 0.695 0.799 Annexin [Source:RefSeq peptide;Acc:NP_001022755]
7. R02D3.3 R02D3.3 2490 5.517 0.797 0.501 0.392 0.501 0.953 0.932 0.625 0.816
8. F48E8.1 lon-1 3486 5.384 0.768 0.688 0.427 0.688 0.954 0.878 0.606 0.375 LONg [Source:RefSeq peptide;Acc:NP_498167]
9. Y48G8AL.15 Y48G8AL.15 552 5.373 0.783 0.470 0.458 0.470 0.950 0.928 0.696 0.618
10. F22F7.5 ckb-4 1083 5.146 0.651 0.547 - 0.547 0.838 0.956 0.730 0.877 Choline Kinase B [Source:RefSeq peptide;Acc:NP_503573]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA