C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Results for R04D3.4

Gene ID Gene Name Reads Transcripts Annotation
R04D3.4 R04D3.4 565 R04D3.4

Genes with expression patterns similar to R04D3.4

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. R04D3.4 R04D3.4 565 4 1.000 1.000 1.000 1.000 - - - -
2. T05G11.1 pzf-1 1193 3.757 0.991 0.899 0.968 0.899 - - - - Paired Zinc Finger protein [Source:RefSeq peptide;Acc:NP_001256688]
3. T13H2.4 pqn-65 3989 3.756 0.961 0.918 0.959 0.918 - - - - Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_741772]
4. ZK662.4 lin-15B 1707 3.751 0.978 0.899 0.975 0.899 - - - -
5. K08A8.1 mek-1 7004 3.721 0.981 0.880 0.980 0.880 - - - - Dual specificity mitogen-activated protein kinase kinase mek-1 [Source:UniProtKB/Swiss-Prot;Acc:Q21307]
6. M163.4 gfi-3 545 3.72 0.890 0.958 0.914 0.958 - - - - GEI-4 (Four) Interacting protein [Source:RefSeq peptide;Acc:NP_510409]
7. C18D1.1 die-1 1355 3.715 0.985 0.892 0.946 0.892 - - - - Dorsal Intercalation and Elongation defect [Source:RefSeq peptide;Acc:NP_496175]
8. F54B11.3 unc-84 2491 3.701 0.923 0.909 0.960 0.909 - - - - Nuclear migration and anchoring protein unc-84 [Source:UniProtKB/Swiss-Prot;Acc:Q20745]
9. F16H11.3 ent-5 1019 3.699 0.967 0.882 0.968 0.882 - - - - Equilibrative Nucleoside Transporter [Source:RefSeq peptide;Acc:NP_508795]
10. F53H4.1 csb-1 1001 3.696 0.888 0.919 0.970 0.919 - - - - human CSB (Cockayne Syndrome B) homolog [Source:RefSeq peptide;Acc:NP_510607]
11. Y11D7A.13 flh-3 1015 3.689 0.953 0.897 0.942 0.897 - - - - FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_501619]
12. F22F4.2 inx-3 2117 3.682 0.970 0.891 0.930 0.891 - - - - Innexin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19746]
13. C36C9.1 meg-4 397 3.681 0.953 0.889 0.950 0.889 - - - -
14. ZK829.5 tbx-36 580 3.68 0.974 0.873 0.960 0.873 - - - - Putative T-box protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q23622]
15. C17F4.5 fbxc-50 1695 3.676 0.995 0.847 0.987 0.847 - - - - F-box C protein [Source:RefSeq peptide;Acc:NP_494488]
16. Y26E6A.1 ekl-5 793 3.67 0.983 0.875 0.937 0.875 - - - -
17. F13C5.2 F13C5.2 2918 3.658 0.957 0.888 0.925 0.888 - - - -
18. B0513.1 lin-66 11549 3.655 0.951 0.885 0.934 0.885 - - - -
19. F35C8.7 chtl-1 3321 3.649 0.955 0.857 0.980 0.857 - - - - Choline transporter-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20026]
20. T26C11.7 ceh-39 1190 3.649 0.974 0.849 0.977 0.849 - - - - Homeobox protein ceh-39 [Source:UniProtKB/Swiss-Prot;Acc:Q22812]
21. C27C12.3 C27C12.3 692 3.648 0.960 0.925 0.838 0.925 - - - -
22. C50E3.12 C50E3.12 77 3.632 0.958 0.850 0.974 0.850 - - - -
23. T04C10.2 epn-1 7689 3.628 0.955 0.862 0.949 0.862 - - - - EPsiN (endocytic protein) homolog [Source:RefSeq peptide;Acc:NP_510459]
24. Y6G8.3 ztf-25 301 3.623 0.980 0.876 0.891 0.876 - - - - Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_507456]
25. F52D2.4 meg-3 696 3.596 0.973 0.842 0.939 0.842 - - - -
26. K02B9.1 meg-1 4212 3.595 0.986 0.823 0.963 0.823 - - - -
27. C26E6.2 flh-2 1511 3.589 0.967 0.825 0.972 0.825 - - - - FLYWCH zinc finger transcription factor homolog [Source:RefSeq peptide;Acc:NP_498049]
28. F53C11.8 swan-1 1974 3.576 0.986 0.833 0.924 0.833 - - - - Seven WD repeats, AN11 family [Source:RefSeq peptide;Acc:NP_506418]
29. F16B4.8 cdc-25.2 1034 3.566 0.986 0.813 0.954 0.813 - - - - M-phase inducer phosphatase cdc-25.2 [Source:UniProtKB/Swiss-Prot;Acc:O44628]
30. ZC53.7 rgs-9 298 3.563 0.976 0.841 0.905 0.841 - - - - Regulator of G-protein signaling rgs-9 [Source:UniProtKB/Swiss-Prot;Acc:Q23376]
31. K02B9.2 meg-2 1169 3.561 0.978 0.818 0.947 0.818 - - - -
32. F29C4.1 daf-1 1925 3.55 0.968 0.829 0.924 0.829 - - - - Cell surface receptor daf-1 [Source:UniProtKB/Swiss-Prot;Acc:P20792]
33. F25F2.2 cdh-4 2909 3.549 0.975 0.810 0.954 0.810 - - - - Cadherin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q19319]
34. ZK1127.1 nos-2 5851 3.544 0.953 0.799 0.993 0.799 - - - - NanOS related [Source:RefSeq peptide;Acc:NP_495452]
35. F14H3.6 F14H3.6 4653 3.544 0.985 0.799 0.961 0.799 - - - -
36. F49H12.1 lsy-2 2498 3.522 0.962 0.798 0.964 0.798 - - - -
37. R06C7.4 cpg-3 5607 3.521 0.925 0.811 0.974 0.811 - - - - Chondroitin proteoglycan 3 [Source:UniProtKB/Swiss-Prot;Acc:Q21771]
38. Y46E12BL.3 spsb-2 1278 3.492 0.917 0.802 0.971 0.802 - - - - SPSB (SPry and Socs Box) family [Source:RefSeq peptide;Acc:NP_497320]
39. F45C12.15 ceh-83 270 3.489 0.928 0.797 0.967 0.797 - - - - C. Elegans Homeobox [Source:RefSeq peptide;Acc:NP_494062]
40. T07C4.6 tbx-9 685 3.489 0.916 0.798 0.977 0.798 - - - - T-box transcription factor tbx-9 [Source:UniProtKB/Swiss-Prot;Acc:Q22289]
41. AH9.2 crn-4 818 3.471 0.979 0.757 0.978 0.757 - - - - Cell death-related nuclease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q10905]
42. T07D3.7 alg-2 2230 3.466 0.987 0.776 0.927 0.776 - - - -
43. F57C7.1 bet-2 2070 3.46 0.954 0.789 0.928 0.789 - - - - BET (two bromodomains) family protein [Source:RefSeq peptide;Acc:NP_509770]
44. F55A8.1 egl-18 2008 3.455 0.959 0.770 0.956 0.770 - - - - GATA-like transcription factor ELT-5; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EGF4]
45. Y38F1A.5 cyd-1 448 3.447 0.990 0.786 0.885 0.786 - - - - G1/S-specific cyclin-D [Source:UniProtKB/Swiss-Prot;Acc:Q9U2M5]
46. K10B2.3 clec-88 12854 3.445 0.887 0.803 0.952 0.803 - - - - C-type lectin domain-containing protein 88 [Source:UniProtKB/Swiss-Prot;Acc:Q86NG3]
47. F47H4.1 lsy-27 367 3.431 0.972 0.776 0.907 0.776 - - - -
48. ZK637.11 cdc-25.3 1088 3.418 0.992 0.731 0.964 0.731 - - - - M-phase inducer phosphatase cdc-25.3 [Source:UniProtKB/Swiss-Prot;Acc:P30634]
49. C17E7.9 C17E7.9 280 3.391 0.980 0.720 0.971 0.720 - - - -
50. F30B5.4 F30B5.4 2396 3.388 0.968 0.793 0.834 0.793 - - - -
51. M05B5.5 hlh-2 911 3.377 0.948 0.736 0.957 0.736 - - - - Helix Loop Helix [Source:RefSeq peptide;Acc:NP_001021581]
52. D2021.1 utx-1 816 3.334 0.885 0.740 0.969 0.740 - - - - human UTX (Ubiquitously transcribed TPR on X) homolog [Source:RefSeq peptide;Acc:NP_509450]
53. C17E7.12 C17E7.12 997 3.33 0.959 0.742 0.887 0.742 - - - -
54. C05D2.1 daf-4 3079 3.327 0.956 0.731 0.909 0.731 - - - - Cell surface receptor daf-4 [Source:UniProtKB/Swiss-Prot;Acc:P50488]
55. F52D2.7 F52D2.7 813 3.311 0.935 0.710 0.956 0.710 - - - -
56. T05G5.7 rmd-1 8539 3.299 0.800 0.767 0.965 0.767 - - - - Regulator of microtubule dynamics protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34560]
57. Y45F10C.3 fbxa-215 4016 3.218 0.820 0.723 0.952 0.723 - - - - F-box A protein [Source:RefSeq peptide;Acc:NP_502641]
58. C16H3.3 C16H3.3 2005 3.15 0.969 0.655 0.871 0.655 - - - -
59. ZK836.2 ZK836.2 12404 3.025 0.988 0.529 0.979 0.529 - - - - Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1 homolog, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q23629]
60. C17E4.4 C17E4.4 855 2.942 0.961 0.546 0.889 0.546 - - - -
61. F54D5.7 F54D5.7 7083 2.906 0.982 0.481 0.962 0.481 - - - - Probable glutaryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q20772]
62. R09A8.2 R09A8.2 221 2.868 0.932 0.968 - 0.968 - - - -
63. K07F5.14 K07F5.14 4570 2.859 0.903 0.489 0.978 0.489 - - - -
64. F17A9.6 ceh-49 104 2.8 0.992 0.904 - 0.904 - - - - One cut domain family member [Source:RefSeq peptide;Acc:NP_504581]
65. ZK154.6 ZK154.6 1530 2.785 0.986 0.431 0.937 0.431 - - - -
66. T13F2.2 T13F2.2 4196 2.772 0.957 0.442 0.931 0.442 - - - - Putative RNA polymerase II transcriptional coactivator [Source:UniProtKB/Swiss-Prot;Acc:Q94045]
67. F29G9.6 dhs-17 385 2.771 0.967 0.902 - 0.902 - - - - DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_001041108]
68. W01C8.4 set-20 276 2.756 0.856 0.950 - 0.950 - - - - SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_001024933]
69. F43G9.3 F43G9.3 3717 2.732 0.989 0.408 0.927 0.408 - - - -
70. C05C10.7 C05C10.7 744 2.664 0.820 0.438 0.968 0.438 - - - -
71. B0416.5 B0416.5 9980 2.549 0.971 0.789 - 0.789 - - - -
72. T04D3.5 T04D3.5 510 2.462 0.950 0.756 - 0.756 - - - -
73. C41H7.6 C41H7.6 592 2.398 0.994 0.702 - 0.702 - - - -
74. K09G1.1 K09G1.1 16262 2.209 0.912 0.168 0.961 0.168 - - - -
75. Y49G5A.1 Y49G5A.1 0 1.983 0.997 - 0.986 - - - - -
76. C04B4.4 C04B4.4 0 1.98 0.986 - 0.994 - - - - -
77. K04D7.6 K04D7.6 0 1.972 0.987 - 0.985 - - - - -
78. W06D11.5 W06D11.5 0 1.965 0.973 - 0.992 - - - - -
79. Y4C6A.4 Y4C6A.4 1416 1.959 0.983 - 0.976 - - - - -
80. T05H10.8 T05H10.8 0 1.958 0.981 - 0.977 - - - - -
81. E03A3.5 E03A3.5 0 1.956 0.990 - 0.966 - - - - -
82. T16G12.9 T16G12.9 0 1.952 0.988 - 0.964 - - - - -
83. F12E12.2 F12E12.2 0 1.951 0.988 - 0.963 - - - - -
84. F31F6.3 F31F6.3 0 1.946 0.957 - 0.989 - - - - -
85. F19H6.5 F19H6.5 2047 1.946 0.955 - 0.991 - - - - -
86. F14D7.3 F14D7.3 0 1.946 0.954 - 0.992 - - - - -
87. F16B12.7 F16B12.7 0 1.939 0.986 - 0.953 - - - - -
88. F14H3.8 F14H3.8 0 1.939 0.962 - 0.977 - - - - -
89. T21C12.3 T21C12.3 1992 1.937 0.973 - 0.964 - - - - -
90. W06D11.2 W06D11.2 0 1.928 0.977 - 0.951 - - - - -
91. F08F3.8 F08F3.8 45 1.923 0.959 - 0.964 - - - - -
92. T02G5.14 T02G5.14 0 1.921 0.955 - 0.966 - - - - -
93. C42C1.2 C42C1.2 0 1.921 0.976 - 0.945 - - - - -
94. H04M03.11 H04M03.11 130 1.919 0.951 - 0.968 - - - - -
95. F47G6.3 F47G6.3 813 1.919 0.977 - 0.942 - - - - -
96. C17E7.13 C17E7.13 0 1.914 0.991 - 0.923 - - - - -
97. F22E5.20 F22E5.20 0 1.913 0.985 - 0.928 - - - - -
98. C50E10.1 C50E10.1 3448 1.911 0.975 0.014 0.908 0.014 - - - -
99. F02E11.2 F02E11.2 5615 1.908 0.954 - 0.954 - - - - -
100. ZC53.2 ZC53.2 0 1.899 0.977 - 0.922 - - - - -

There are 27 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA