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Results for F54E4.1

Gene ID Gene Name Reads Transcripts Annotation
F54E4.1 rbc-1 3277 F54E4.1a, F54E4.1b RaBConnectin related [Source:RefSeq peptide;Acc:NP_001257246]

Genes with expression patterns similar to F54E4.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F54E4.1 rbc-1 3277 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 RaBConnectin related [Source:RefSeq peptide;Acc:NP_001257246]
2. T01C8.1 aak-2 5650 6.495 0.876 0.760 0.811 0.760 0.739 0.952 0.691 0.906 5'-AMP-activated protein kinase catalytic subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q95ZQ4]
3. H20J18.1 scd-1 5491 6.47 0.889 0.768 0.661 0.768 0.686 0.959 0.844 0.895 Suppressor of Constitutive Dauer formation [Source:RefSeq peptide;Acc:NP_741912]
4. T12F5.4 lin-59 5187 6.358 0.792 0.765 0.709 0.765 0.663 0.962 0.800 0.902 Probable histone-lysine N-methyltransferase lin-59 [Source:UniProtKB/Swiss-Prot;Acc:O44757]
5. K11E8.1 unc-43 25109 6.278 0.803 0.750 0.731 0.750 0.646 0.959 0.736 0.903 Calcium/calmodulin-dependent protein kinase type II [Source:RefSeq peptide;Acc:NP_001023293]
6. F27D9.1 unc-18 5574 6.267 0.647 0.794 0.683 0.794 0.662 0.973 0.806 0.908 Putative acetylcholine regulator unc-18 [Source:UniProtKB/Swiss-Prot;Acc:P34815]
7. R10E9.1 msi-1 17734 6.207 0.650 0.803 0.646 0.803 0.726 0.957 0.705 0.917 MuSashI (fly neural) family [Source:RefSeq peptide;Acc:NP_497799]
8. R02E12.2 mop-25.1 8263 6.199 0.788 0.741 0.670 0.741 0.780 0.958 0.627 0.894 MO25 (MOuse embryo scaffolding Protein) homolog [Source:RefSeq peptide;Acc:NP_001024819]
9. F55C10.1 cnb-1 10326 6.14 0.609 0.774 0.656 0.774 0.651 0.968 0.798 0.910 CalciNeurin B [Source:RefSeq peptide;Acc:NP_001256318]
10. B0001.6 eri-12 6103 6.08 0.557 0.749 0.781 0.749 0.785 0.961 0.641 0.857 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_502310]
11. C43H6.1 trpp-12 4424 6.074 0.672 0.795 0.826 0.795 0.627 0.961 0.624 0.774 TRansport Protein Particle [Source:RefSeq peptide;Acc:NP_508439]
12. W02A11.3 toe-4 3061 5.959 0.672 0.756 0.808 0.756 0.569 0.950 0.614 0.834 Target Of ERK kinase MPK-1 [Source:RefSeq peptide;Acc:NP_493231]
13. F46F6.4 dyf-6 2988 5.926 0.777 0.710 0.771 0.710 0.654 0.959 0.494 0.851 Intraflagellar transport protein variant b; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF67]
14. M02A10.3 sli-1 2276 5.898 0.815 0.676 0.701 0.676 0.554 0.951 0.729 0.796 Suppressor of LIneage defect [Source:RefSeq peptide;Acc:NP_508145]
15. F45E1.6 his-71 6187 5.847 0.696 0.676 0.591 0.676 0.679 0.970 0.646 0.913 Histone H3.3 type 1 [Source:UniProtKB/Swiss-Prot;Acc:Q10453]
16. R06A10.2 gsa-1 26038 5.846 0.683 0.661 0.684 0.661 0.721 0.953 0.622 0.861 G protein, Subunit Alpha [Source:RefSeq peptide;Acc:NP_490817]
17. F19B10.1 F19B10.1 503 5.816 0.724 0.739 0.586 0.739 0.631 0.954 0.668 0.775
18. F25H5.1 lim-9 21300 5.699 0.560 0.722 0.490 0.722 0.631 0.956 0.745 0.873 LIM domain family [Source:RefSeq peptide;Acc:NP_001025228]
19. F09B9.2 unc-115 18081 5.632 0.620 0.582 0.563 0.582 0.703 0.966 0.714 0.902 Putative actin-binding protein UNC-115 [Source:UniProtKB/TrEMBL;Acc:O77133]
20. R07E4.6 kin-2 28939 5.569 0.407 0.658 0.597 0.658 0.696 0.963 0.687 0.903 cAMP-dependent protein kinase regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:P30625]
21. K02H8.1 mbl-1 5186 5.562 0.525 0.616 0.535 0.616 0.661 0.964 0.761 0.884 Muscleblind-like protein [Source:UniProtKB/Swiss-Prot;Acc:Q94250]
22. C29H12.2 C29H12.2 11018 5.533 0.582 0.689 0.454 0.689 0.703 0.959 0.630 0.827
23. F29D11.1 lrp-1 8706 5.34 0.601 0.661 0.363 0.661 0.597 0.952 0.571 0.934 Low-density lipoprotein receptor-related protein [Source:UniProtKB/Swiss-Prot;Acc:Q04833]
24. M142.1 unc-119 2942 5.294 0.611 0.649 0.691 0.649 0.453 0.963 0.409 0.869
25. ZK470.5 nck-1 2444 5.094 0.870 0.693 0.775 0.693 0.596 0.954 0.513 - NCK (Non-Catalytic region of tyrosine Kinase) adaptor protein family [Source:RefSeq peptide;Acc:NP_508706]
26. F52A8.2 gpb-2 4748 5.091 0.416 0.607 0.467 0.607 0.625 0.952 0.637 0.780 Guanine nucleotide-binding protein subunit beta-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20636]
27. C43E11.6 nab-1 3088 4.812 - 0.616 0.740 0.616 0.425 0.957 0.744 0.714 NeurABin [Source:RefSeq peptide;Acc:NP_491332]
28. C31H5.5 C31H5.5 0 4.784 0.755 - 0.630 - 0.771 0.958 0.829 0.841
29. B0457.2 B0457.2 2835 4.722 - 0.589 0.534 0.589 0.535 0.960 0.703 0.812
30. Y37E11AR.2 siah-1 2087 4.612 - 0.740 - 0.740 0.689 0.950 0.680 0.813 E3 ubiquitin-protein ligase siah-1 [Source:UniProtKB/Swiss-Prot;Acc:Q965X6]
31. F25H2.1 tli-1 1244 4.525 0.768 - 0.754 - 0.572 0.958 0.714 0.759 ToLlIp homolog [Source:RefSeq peptide;Acc:NP_492757]
32. E01H11.1 pkc-2 5656 4.448 0.160 0.333 0.417 0.333 0.608 0.978 0.750 0.869 Protein kinase C-like 2 [Source:UniProtKB/Swiss-Prot;Acc:P90980]
33. Y45F10B.15 Y45F10B.15 0 4.378 0.695 - 0.462 - 0.618 0.958 0.749 0.896
34. C43H6.4 C43H6.4 72 4.354 0.655 - 0.851 - 0.579 0.950 0.512 0.807
35. F42G2.2 F42G2.2 0 4.136 0.565 - 0.553 - 0.574 0.950 0.656 0.838
36. F42G9.2 cyn-6 1467 3.842 - 0.677 0.695 0.677 - 0.956 - 0.837 Peptidyl-prolyl cis-trans isomerase 6 [Source:UniProtKB/Swiss-Prot;Acc:P52014]
37. C10F3.6 fut-8 1967 3.813 0.391 - 0.623 - 0.572 0.960 0.400 0.867 Alpha-(1,6)-fucosyltransferase [Source:RefSeq peptide;Acc:NP_504555]
38. C18A11.2 C18A11.2 581 2.986 - - - - 0.522 0.963 0.658 0.843
39. F52E1.2 F52E1.2 982 2.97 0.638 - 0.645 - - 0.957 - 0.730
40. T08B1.3 alh-5 3887 2.962 - - - - 0.524 0.970 0.661 0.807 Aldehyde dehydrogenase [Source:RefSeq peptide;Acc:NP_503545]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA