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Results for F38B7.1

Gene ID Gene Name Reads Transcripts Annotation
F38B7.1 ccch-1 14819 F38B7.1a, F38B7.1b CCCH-type zinc finger putative transcription factor [Source:RefSeq peptide;Acc:NP_505926]

Genes with expression patterns similar to F38B7.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F38B7.1 ccch-1 14819 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 CCCH-type zinc finger putative transcription factor [Source:RefSeq peptide;Acc:NP_505926]
2. C36E6.5 mlc-2 131708 7.017 0.805 0.828 0.852 0.828 0.936 0.967 0.860 0.941 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
3. F09F7.2 mlc-3 293611 6.978 0.755 0.892 0.902 0.892 0.960 0.857 0.879 0.841 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
4. C36E6.3 mlc-1 240926 6.953 0.722 0.851 0.879 0.851 0.930 0.967 0.888 0.865 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
5. K11C4.3 unc-70 23505 6.788 0.775 0.795 0.811 0.795 0.866 0.909 0.882 0.955 Beta-G spectrin; Beta-spectrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EG85]
6. ZC477.9 deb-1 21952 6.745 0.737 0.749 0.843 0.749 0.926 0.980 0.828 0.933 Vinculin [Source:UniProtKB/Swiss-Prot;Acc:P19826]
7. R10E9.1 msi-1 17734 6.722 0.679 0.820 0.764 0.820 0.913 0.907 0.865 0.954 MuSashI (fly neural) family [Source:RefSeq peptide;Acc:NP_497799]
8. T17H7.4 pat-12 17362 6.708 0.825 0.770 0.719 0.770 0.927 0.952 0.837 0.908 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_497245]
9. T10B10.2 ucr-2.2 11361 6.648 0.692 0.711 0.802 0.711 0.927 0.963 0.912 0.930 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_510521]
10. VW06B3R.1 ucr-2.1 23178 6.612 0.717 0.714 0.781 0.714 0.944 0.955 0.838 0.949 Ubiquinol-Cytochrome c oxidoReductase complex [Source:RefSeq peptide;Acc:NP_510012]
11. F02E8.1 asb-2 46847 6.558 0.752 0.698 0.795 0.698 0.919 0.967 0.846 0.883 ATP Synthase B homolog [Source:RefSeq peptide;Acc:NP_508770]
12. F47B10.1 suca-1 22753 6.492 0.654 0.642 0.817 0.642 0.933 0.959 0.880 0.965 Probable succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P53588]
13. K09A9.5 gas-1 21971 6.491 0.707 0.701 0.793 0.701 0.911 0.953 0.803 0.922 Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93873]
14. C37E2.1 idhb-1 13719 6.44 0.684 0.623 0.789 0.623 0.936 0.978 0.871 0.936 Probable isocitrate dehydrogenase [NAD] subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93353]
15. K03C7.2 fkh-9 10958 6.433 0.660 0.681 0.764 0.681 0.969 0.950 0.823 0.905 ForKHead transcription factor family [Source:RefSeq peptide;Acc:NP_001024760]
16. C09D1.1 unc-89 62808 6.352 0.614 0.774 0.723 0.774 0.906 0.803 0.804 0.954 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
17. K04H4.1 emb-9 32527 6.343 0.677 0.716 0.724 0.716 0.898 0.952 0.773 0.887 Collagen alpha-1(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17139]
18. Y71H10A.1 pfk-1.1 10474 6.259 0.475 0.676 0.789 0.676 0.921 0.952 0.832 0.938 ATP-dependent 6-phosphofructokinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9TZL8]
19. T22A3.4 set-18 6892 6.173 0.650 0.625 0.829 0.625 0.860 0.962 0.794 0.828 SET (trithorax/polycomb) domain containing [Source:RefSeq peptide;Acc:NP_492772]
20. F33C8.3 tsp-8 4074 5.968 0.524 0.592 0.786 0.592 0.792 0.871 0.861 0.950 Tetraspanin [Source:RefSeq peptide;Acc:NP_510445]
21. C23H3.3 C23H3.3 1260 5.814 0.778 0.268 0.858 0.268 0.919 0.959 0.834 0.930
22. T27A1.4 lgc-34 7629 5.784 - 0.664 0.897 0.664 0.880 0.903 0.825 0.951 Ligand-Gated ion Channel [Source:RefSeq peptide;Acc:NP_493752]
23. ZC266.1 ZC266.1 326 5.75 0.616 0.440 0.618 0.440 0.904 0.954 0.843 0.935
24. K11H12.8 K11H12.8 9753 5.712 0.777 0.322 0.819 0.322 0.784 0.859 0.869 0.960
25. B0228.4 cpna-2 17895 5.259 0.395 0.738 0.461 0.738 0.732 0.561 0.682 0.952 Copine family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09221]
26. F46H5.4 F46H5.4 0 5.23 0.697 - 0.902 - 0.956 0.844 0.883 0.948
27. F38B7.2 F38B7.2 155 5.183 0.622 - 0.844 - 0.924 0.961 0.877 0.955
28. W01G7.1 daf-5 7005 5.067 0.507 0.448 0.597 0.448 0.703 0.955 0.685 0.724 Abnormal DAuer Formation DAF-5, a Ski oncogene homolog involved in a neuronal TGF beta pathway (71.0 kD) (Daf-5); Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EDM7]
29. F26A3.5 F26A3.5 921 5.021 0.669 - 0.777 - 0.902 0.964 0.861 0.848
30. F26F12.4 F26F12.4 0 4.958 0.724 - 0.622 - 0.878 0.966 0.854 0.914
31. T04C9.4 mlp-1 22534 4.952 0.395 0.252 0.476 0.252 0.843 0.951 0.816 0.967 MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein) [Source:RefSeq peptide;Acc:NP_498301]
32. F14B4.1 F14B4.1 0 4.485 0.693 - 0.449 - 0.794 0.874 0.719 0.956
33. Y54G2A.12 Y54G2A.12 977 4.461 0.176 0.128 0.454 0.128 0.811 0.973 0.830 0.961
34. F28B4.2 rgl-1 2064 4.268 0.314 0.437 0.655 0.437 0.833 0.959 0.633 - Ral GDS-Like [Source:RefSeq peptide;Acc:NP_508550]
35. C28D4.1 nhr-100 1393 3.537 0.343 0.489 0.455 0.489 0.808 0.953 - - Nuclear hormone receptor family member nhr-100 [Source:UniProtKB/Swiss-Prot;Acc:O17611]
36. C07A9.10 C07A9.10 0 3.354 0.325 - - - 0.660 0.956 0.641 0.772

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA