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Results for F08B1.1

Gene ID Gene Name Reads Transcripts Annotation
F08B1.1 vhp-1 7069 F08B1.1a.1, F08B1.1a.2, F08B1.1a.3, F08B1.1b.1, F08B1.1b.2, F08B1.1c.1, F08B1.1c.2 Tyrosine-protein phosphatase vhp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10038]

Genes with expression patterns similar to F08B1.1

Nr. Gene ID Gene Name Reads Σ scores herm1 herm2 herm3 herm4 male1 male2 male3 male4 Annotation
1. F08B1.1 vhp-1 7069 8 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 Tyrosine-protein phosphatase vhp-1 [Source:UniProtKB/Swiss-Prot;Acc:Q10038]
2. K11E8.1 unc-43 25109 6.864 0.742 0.883 0.844 0.883 0.790 0.970 0.807 0.945 Calcium/calmodulin-dependent protein kinase type II [Source:RefSeq peptide;Acc:NP_001023293]
3. F52D10.3 ftt-2 101404 6.802 0.756 0.854 0.802 0.854 0.818 0.958 0.822 0.938 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
4. F55C10.1 cnb-1 10326 6.672 0.636 0.843 0.871 0.843 0.748 0.950 0.853 0.928 CalciNeurin B [Source:RefSeq peptide;Acc:NP_001256318]
5. C50F4.5 his-41 14268 6.657 0.759 0.823 0.818 0.823 0.782 0.959 0.745 0.948 Probable histone H2B 3 [Source:UniProtKB/Swiss-Prot;Acc:Q27484]
6. F20B6.8 hpk-1 12499 6.582 0.774 0.814 0.837 0.814 0.695 0.955 0.760 0.933 Homeodomain-interacting protein kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8MQ70]
7. F58A4.7 hlh-11 15514 6.527 0.667 0.793 0.892 0.793 0.749 0.951 0.767 0.915 Helix-loop-helix protein 11 [Source:UniProtKB/Swiss-Prot;Acc:P34474]
8. T22H6.6 gei-3 11546 6.476 0.571 0.807 0.827 0.807 0.743 0.937 0.830 0.954 GEX Interacting protein [Source:RefSeq peptide;Acc:NP_001076772]
9. R06A10.2 gsa-1 26038 6.37 0.716 0.684 0.850 0.684 0.788 0.974 0.746 0.928 G protein, Subunit Alpha [Source:RefSeq peptide;Acc:NP_490817]
10. R02E12.2 mop-25.1 8263 6.284 0.720 0.810 0.670 0.810 0.742 0.951 0.686 0.895 MO25 (MOuse embryo scaffolding Protein) homolog [Source:RefSeq peptide;Acc:NP_001024819]
11. F46F2.2 kin-20 7883 6.27 0.702 0.806 0.695 0.806 0.743 0.966 0.698 0.854 Casein kinase I isoform delta [Source:UniProtKB/Swiss-Prot;Acc:Q20471]
12. R03G5.2 sek-1 4194 6.235 0.633 0.799 0.773 0.799 0.676 0.952 0.790 0.813 Dual specificity mitogen-activated protein kinase kinase sek-1 [Source:UniProtKB/Swiss-Prot;Acc:G5EDF7]
13. B0001.6 eri-12 6103 6.219 0.598 0.813 0.729 0.813 0.665 0.961 0.733 0.907 Enhanced RNAI (RNA interference) [Source:RefSeq peptide;Acc:NP_502310]
14. T05A10.1 sma-9 3815 6.162 0.888 0.735 0.597 0.735 0.681 0.956 0.754 0.816 SMAll [Source:RefSeq peptide;Acc:NP_741897]
15. R07E4.6 kin-2 28939 6.115 0.403 0.768 0.754 0.768 0.774 0.965 0.780 0.903 cAMP-dependent protein kinase regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:P30625]
16. Y71G12A.3 tub-2 4497 6.051 0.705 0.628 0.719 0.628 0.818 0.958 0.676 0.919 TUBby-related [Source:RefSeq peptide;Acc:NP_001293352]
17. K02G10.8 dnj-14 5398 6.019 0.582 0.745 0.609 0.745 0.596 0.958 0.892 0.892 DNaJ domain (prokaryotic heat shock protein) [Source:RefSeq peptide;Acc:NP_001257014]
18. C43H6.1 trpp-12 4424 6.012 0.623 0.757 0.706 0.757 0.616 0.951 0.765 0.837 TRansport Protein Particle [Source:RefSeq peptide;Acc:NP_508439]
19. F09B9.2 unc-115 18081 5.967 0.627 0.629 0.696 0.629 0.673 0.961 0.809 0.943 Putative actin-binding protein UNC-115 [Source:UniProtKB/TrEMBL;Acc:O77133]
20. T12F5.4 lin-59 5187 5.945 0.660 0.677 0.563 0.677 0.740 0.975 0.783 0.870 Probable histone-lysine N-methyltransferase lin-59 [Source:UniProtKB/Swiss-Prot;Acc:O44757]
21. B0513.1 lin-66 11549 5.934 0.722 0.661 0.523 0.661 0.751 0.966 0.775 0.875
22. C09B8.6 hsp-25 44939 5.914 0.468 0.732 0.847 0.732 0.693 0.955 0.661 0.826 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001024374]
23. K09A9.2 rab-14 5898 5.758 0.580 0.690 0.406 0.690 0.690 0.957 0.857 0.888 RAB family [Source:RefSeq peptide;Acc:NP_510572]
24. C33A11.1 nbid-1 7523 5.523 0.599 0.596 0.650 0.596 0.764 0.965 0.630 0.723 Nuclear Factor of Kappa light polypeptide gene enhancer in b(B)-cells n [Source:RefSeq peptide;Acc:NP_510540]
25. F25H2.2 snx-27 2165 5.456 - 0.843 0.595 0.843 0.714 0.961 0.691 0.809 Sorting NeXin [Source:RefSeq peptide;Acc:NP_492758]
26. C09B8.7 pak-1 2593 4.95 0.756 0.770 0.452 0.770 0.696 0.957 0.549 - Serine/threonine-protein kinase pak-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17850]
27. R11B5.1 tbc-12 2559 4.915 0.709 0.706 0.632 0.706 0.469 0.966 0.727 - TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_508458]
28. Y37E11AR.2 siah-1 2087 4.64 - 0.655 - 0.655 0.759 0.950 0.754 0.867 E3 ubiquitin-protein ligase siah-1 [Source:UniProtKB/Swiss-Prot;Acc:Q965X6]
29. F42G2.2 F42G2.2 0 4.54 0.680 - 0.755 - 0.504 0.958 0.800 0.843
30. T23F4.1 T23F4.1 0 4.364 0.588 - 0.716 - 0.658 0.960 0.620 0.822
31. C42D4.6 skr-16 1098 4.213 0.517 0.576 0.264 0.576 - 0.953 0.542 0.785 SKp1 Related (ubiquitin ligase complex component) [Source:RefSeq peptide;Acc:NP_501128]
32. F53C11.8 swan-1 1974 4.102 0.705 0.641 0.411 0.641 - 0.960 0.744 - Seven WD repeats, AN11 family [Source:RefSeq peptide;Acc:NP_506418]
33. T20B3.1 T20B3.1 369 4.036 0.713 - 0.567 - 0.453 0.975 0.456 0.872
34. Y94H6A.6 ubc-8 3142 3.798 - - 0.466 - 0.807 0.951 0.746 0.828 UBiquitin Conjugating enzyme [Source:RefSeq peptide;Acc:NP_500245]
35. ZK669.1 spv-1 2155 3.687 0.149 - 0.446 - 0.556 0.956 0.701 0.879 Spermathecal Physiology Variant [Source:RefSeq peptide;Acc:NP_495666]
36. K10D6.3 K10D6.3 194 3.069 - - - - 0.738 0.953 0.799 0.579
37. F01G10.8 daf-14 1458 3.047 - - 0.553 - - 0.954 0.645 0.895 Smad protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EEP2]
38. T07F12.4 T07F12.4 152 2.84 0.636 - 0.547 - - 0.960 0.697 -
39. F55A12.4 dhs-2 588 2.693 - - - - 0.562 0.950 0.340 0.841 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_491575]

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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA