C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male4, section s37.

Sample reads: 184,553. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.6 act-1 1240.00 6719.20 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. F11C3.3 unc-54 1010.00 5472.89 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
3. T04C12.4 act-3 959.00 5196.54 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. M03F4.2 act-4 920.00 4985.21 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
5. F54C1.7 pat-10 885.00 4795.56 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
6. C36E6.3 mlc-1 855.00 4632.99 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
7. Y47D7A.11 Y47D7A.11 855.00 4632.99
8. F07A5.7 unc-15 828.00 4486.69 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
9. T27E9.1 ant-1.1 828.00 4486.69 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
10. C35B1.3 C35B1.3 743.00 4026.10
11. F09F7.2 mlc-3 725.00 3928.56 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
12. Y47D7A.7 Y47D7A.7 693.00 3755.16
13. Y105E8B.1 lev-11 639.00 3462.55 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
14. T25F10.6 clik-1 616.00 3337.92 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
15. F52H3.7 lec-2 539.00 2920.68 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
16. T20B3.2 tni-3 531.00 2877.33 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
17. F20A1.1 F20A1.1 523.00 2833.98
18. C36E6.5 mlc-2 508.00 2752.70 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
19. F28H1.2 cpn-3 508.00 2752.70 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
20. Y47D7A.2 Y47D7A.2 494.00 2676.84
21. W06H8.8 ttn-1 487.00 2638.91 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
22. F08B6.4 unc-87 481.00 2606.40 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
23. F53A9.10 tnt-2 462.00 2503.44 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
24. RIT1P.688 462.00 2503.44
25. Y82E9BR.3 Y82E9BR.3 462.00 2503.44 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
26. F46H5.3 F46H5.3 456.00 2470.93 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
27. K10B3.9 mai-1 450.00 2438.42 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
28. E04A4.7 cyc-2.1 444.00 2405.91 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
29. F02E11.5 scl-15 444.00 2405.91 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_494496]
30. C39E9.5 scl-7 433.00 2346.30 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_502509]
31. C17F4.7 C17F4.7 428.00 2319.21
32. C34E10.6 atp-2 407.00 2205.41 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
33. Y38A10A.5 crt-1 407.00 2205.41 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
34. K09F5.3 spp-14 384.00 2080.78 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001041271]
35. Y119D3B.21 Y119D3B.21 375.00 2032.01
36. T04C12.5 act-2 366.00 1983.25 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
37. C06A8.3 C06A8.3 358.00 1939.90
38. T09F5.9 clec-47 358.00 1939.90 C-type LECtin [Source:RefSeq peptide;Acc:NP_506744]
39. C06E1.6 fipr-16 350.00 1896.55 Fungus-induced-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P34301]
40. ZK721.2 unc-27 342.00 1853.20 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
41. D1022.2 D1022.2 339.00 1836.94
42. Y48A6B.4 fipr-17 339.00 1836.94 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_499414]
43. K11D9.2 sca-1 335.00 1815.27 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
44. C39E9.6 scl-8 331.00 1793.59 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_502510]
45. C42C1.14 rpl-34 331.00 1793.59 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
46. F40F11.1 rps-11 331.00 1793.59 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
47. M01D7.5 nlp-12 331.00 1793.59 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_490908]
48. RIT6P.424 331.00 1793.59
49. C06B8.8 rpl-38 328.00 1777.34 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
50. C04F12.4 rpl-14 314.00 1701.47 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
51. F42C5.8 rps-8 314.00 1701.47 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
52. K10C2.4 fah-1 307.00 1663.54 FumarylAcetoacetate Hydrolase [Source:RefSeq peptide;Acc:NP_509083]
53. F02A9.2 far-1 304.00 1647.29 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
54. F54E7.2 rps-12 304.00 1647.29 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
55. C53B4.5 col-119 300.00 1625.61 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
56. C55B7.4 acdh-1 297.00 1609.36 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491871]
57. F56E10.4 rps-27 297.00 1609.36 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
58. K02D7.3 col-101 297.00 1609.36 COLlagen [Source:RefSeq peptide;Acc:NP_499905]
59. R10E11.8 vha-1 297.00 1609.36 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
60. Y51A2D.14 Y51A2D.14 297.00 1609.36
61. C48B4.12 C48B4.12 294.00 1593.10
62. C44B12.2 ost-1 288.00 1560.59 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
63. R05G6.7 vdac-1 288.00 1560.59 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
64. Y43B11AR.1 Y43B11AR.1 282.00 1528.08
65. E03D2.1 nlp-13 279.00 1511.82 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504170]
66. T05D4.1 aldo-1 279.00 1511.82 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
67. C18A11.7 dim-1 273.00 1479.31 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
68. F43E2.5 msra-1 273.00 1479.31 Methionine Sulfoxide Reductase A [Source:RefSeq peptide;Acc:NP_495540]
69. ZK1010.1 ubq-2 273.00 1479.31 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
70. F37C12.4 rpl-36 270.00 1463.05 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
71. Y105C5B.5 Y105C5B.5 270.00 1463.05
72. F10B5.1 rpl-10 261.00 1414.28 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
73. ZC434.2 rps-7 261.00 1414.28 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
74. F15B9.1 far-3 259.00 1403.44 Fatty Acid/Retinol binding protein [Source:RefSeq peptide;Acc:NP_506251]
75. F39H2.1 flp-22 259.00 1403.44 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_492344]
76. D1007.6 rps-10 256.00 1387.19 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
77. F11G11.11 col-20 256.00 1387.19 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
78. F36A2.6 rps-15 256.00 1387.19 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
79. Y105E8A.16 rps-20 256.00 1387.19 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
80. Y51A2D.11 ttr-26 256.00 1387.19 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_507630]
81. Y51A2D.8 Y51A2D.8 253.00 1370.93
82. T01C3.6 rps-16 251.00 1360.10 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
83. T05A1.2 col-122 251.00 1360.10 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
84. F01G4.6 F01G4.6 248.00 1343.84 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
85. F31E3.5 eef-1A.1 248.00 1343.84 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
86. Y69A2AR.18 Y69A2AR.18 248.00 1343.84
87. RIT2P.801 245.00 1327.58
88. RIT2P.88 245.00 1327.58
89. C24A1.1 flp-24 243.00 1316.75 FMRFamide-like neuropeptides 24 VPSAGDMMVRF-amide [Source:UniProtKB/Swiss-Prot;Acc:O17058]
90. H28O16.1 H28O16.1 243.00 1316.75 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
91. M02D8.1 M02D8.1 243.00 1316.75
92. F44E5.4 F44E5.4 240.00 1300.49
93. F47B7.1 F47B7.1 240.00 1300.49 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
94. K02B2.5 rps-25 240.00 1300.49 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
95. F13B10.2 rpl-3 238.00 1289.65 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
96. F39B2.6 rps-26 238.00 1289.65 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
97. W02D3.5 lbp-6 238.00 1289.65 Fatty acid-binding protein homolog 6 [Source:UniProtKB/Swiss-Prot;Acc:O01812]
98. B0213.2 nlp-27 230.00 1246.30 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
99. B0513.3 rpl-29 230.00 1246.30 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
100. F14D2.7 F14D2.7 230.00 1246.30
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA