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Experiment male4, section s22.

Sample reads: 252,262. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 3180.00 12606.09 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F56E10.4 rps-27 1420.00 5629.14 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
3. RIT1P.688 1420.00 5629.14
4. F54E7.2 rps-12 1240.00 4915.58 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
5. C42C1.14 rpl-34 1060.00 4202.03 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
6. F10B5.1 rpl-10 1060.00 4202.03 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
7. C04F12.4 rpl-14 1010.00 4003.82 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
8. C49H3.11 rps-2 1010.00 4003.82 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
9. E04A4.7 cyc-2.1 959.00 3801.65 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
10. T04C12.6 act-1 959.00 3801.65 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
11. Y71F9AL.13 rpl-1 920.00 3647.05 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
12. F42C5.8 rps-8 885.00 3508.30 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
13. R13A5.8 rpl-9 855.00 3389.37 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
14. D1007.6 rps-10 828.00 3282.34 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
15. F39B2.6 rps-26 828.00 3282.34 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
16. Y82E9BR.3 Y82E9BR.3 828.00 3282.34 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
17. C14B9.7 rpl-21 804.00 3187.20 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
18. F13B10.2 rpl-3 804.00 3187.20 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
19. F40F11.1 rps-11 804.00 3187.20 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
20. Y48B6A.2 rpl-43 804.00 3187.20 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
21. ZC434.2 rps-7 804.00 3187.20 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
22. F28D1.7 rps-23 761.00 3016.74 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
23. Y24D9A.4 rpl-7A 761.00 3016.74 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
24. B0041.4 rpl-4 743.00 2945.39 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
25. F40F8.10 rps-9 743.00 2945.39 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
26. T22F3.4 rpl-11.1 743.00 2945.39 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
27. B0250.1 rpl-2 725.00 2874.03 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
28. F36A2.6 rps-15 725.00 2874.03 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
29. K02B2.5 rps-25 725.00 2874.03 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
30. T01C3.6 rps-16 725.00 2874.03 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
31. W09C5.6 rpl-31 725.00 2874.03 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
32. C06B8.8 rpl-38 708.00 2806.64 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
33. R09B3.3 R09B3.3 708.00 2806.64
34. Y71A12B.1 rps-6 708.00 2806.64 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
35. ZK1010.1 ubq-2 708.00 2806.64 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
36. C37A2.7 C37A2.7 693.00 2747.18 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
37. Y105E8A.16 rps-20 693.00 2747.18 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
38. T27E9.1 ant-1.1 664.00 2632.22 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
39. F28C6.7 rpl-26 639.00 2533.11 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
40. F37C12.9 rps-14 639.00 2533.11 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
41. T04C12.4 act-3 627.00 2485.54 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
42. B0513.3 rpl-29 616.00 2441.94 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
43. F53A3.3 rps-22 616.00 2441.94 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
44. F54C9.5 rpl-5 616.00 2441.94 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
45. F02A9.3 far-2 605.00 2398.33 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
46. F37C12.4 rpl-36 605.00 2398.33 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
47. T05E11.1 rps-5 605.00 2398.33 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
48. ZK652.4 rpl-35 605.00 2398.33 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
49. C09H10.2 rpl-41 594.00 2354.72 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
50. F52B5.6 rpl-25.2 594.00 2354.72 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
51. T07A9.14 T07A9.14 594.00 2354.72
52. W01D2.1 W01D2.1 575.00 2279.40 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
53. M01F1.2 rpl-16 565.00 2239.76 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
54. R151.3 rpl-6 565.00 2239.76 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
55. T05F1.3 rps-19 565.00 2239.76 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
56. F10E7.7 rpl-33 548.00 2172.37 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
57. F11G11.11 col-20 548.00 2172.37 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
58. T04C12.5 act-2 548.00 2172.37 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
59. Y45F10D.12 rpl-18 548.00 2172.37 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
60. F26F12.1 col-140 539.00 2136.69 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
61. C34F6.3 col-179 531.00 2104.98 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
62. F25H2.5 ndk-1 531.00 2104.98 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
63. Y37E3.8 Y37E3.8 531.00 2104.98
64. Y57G11C.16 rps-18 531.00 2104.98 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
65. F26D10.3 hsp-1 523.00 2073.27 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
66. K11H12.2 rpl-15 523.00 2073.27 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
67. C32E8.2 rpl-13 516.00 2045.52 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
68. K02F2.2 ahcy-1 516.00 2045.52 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
69. T24B8.1 rpl-32 508.00 2013.80 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001254195]
70. C26F1.4 rps-30 501.00 1986.05 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
71. F56F3.5 rps-1 487.00 1930.56 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
72. F25H2.10 rla-0 481.00 1906.77 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
73. B0393.1 rps-0 474.00 1879.02 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
74. C53H9.1 rpl-27 468.00 1855.24 60S ribosomal protein L27 [Source:UniProtKB/Swiss-Prot;Acc:P91914]
75. C47E8.11 C47E8.11 462.00 1831.45
76. T05G5.10 iff-1 456.00 1807.67 Eukaryotic translation initiation factor 5A-1 [Source:UniProtKB/Swiss-Prot;Acc:P34563]
77. Y62E10A.1 rla-2 456.00 1807.67 Ribosomal protein, Large subunit, Acidic (P1) [Source:RefSeq peptide;Acc:NP_502571]
78. D1007.12 rpl-24.1 450.00 1783.88 60S ribosomal protein L24 [Source:UniProtKB/Swiss-Prot;Acc:O01868]
79. F53G12.10 rpl-7 450.00 1783.88 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
80. Y106G6H.2 pab-1 450.00 1783.88 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
81. Y37E3.7 rla-1 450.00 1783.88 60S acidic ribosomal protein P1 [Source:UniProtKB/Swiss-Prot;Acc:P91913]
82. C16A3.9 rps-13 444.00 1760.10 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
83. C53B4.5 col-119 444.00 1760.10 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
84. C24F3.6 col-124 439.00 1740.28 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
85. JC8.3 rpl-12 433.00 1716.49 60S ribosomal protein L12 [Source:UniProtKB/Swiss-Prot;Acc:P61866]
86. Y75B12B.2 cyn-7 428.00 1696.67 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
87. F37C12.11 rps-21 422.00 1672.88 40S ribosomal protein S21 [Source:UniProtKB/Swiss-Prot;Acc:P49197]
88. K08D12.6 K08D12.6 422.00 1672.88
89. Y43B11AR.4 rps-4 422.00 1672.88 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
90. Y48G8AL.8 rpl-17 422.00 1672.88 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
91. R11D1.8 rpl-28 417.00 1653.06 60S ribosomal protein L28 [Source:UniProtKB/Swiss-Prot;Acc:Q21930]
92. B0336.9 swp-1 412.00 1633.24 splicing factor (Suppressor of White aPricot) related [Source:RefSeq peptide;Acc:NP_001021121]
93. C26F1.9 rpl-39 412.00 1633.24 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
94. C23G10.3 rps-3 402.00 1593.60 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
95. C27A2.2 rpl-22 402.00 1593.60 60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819]
96. C34E10.6 atp-2 402.00 1593.60 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
97. F11C3.3 unc-54 402.00 1593.60 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
98. C34F6.2 col-178 398.00 1577.74 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
99. C09D4.5 rpl-19 393.00 1557.92 60S ribosomal protein L19 [Source:UniProtKB/Swiss-Prot;Acc:O02639]
100. M03F4.2 act-4 393.00 1557.92 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA