C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male3, section s39.

Sample reads: 174,059. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. C48B4.12 C48B4.12 1420.00 8158.16
2. T04C12.6 act-1 1240.00 7124.02 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. C39E9.6 scl-8 1060.00 6089.89 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_502510]
4. F59B2.12 F59B2.12 1010.00 5802.63
5. C06E1.5 fip-3 959.00 5509.63 Fungus-induced protein 3 [Source:UniProtKB/Swiss-Prot;Acc:P34300]
6. F11C3.3 unc-54 920.00 5285.57 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
7. Y51A2D.8 Y51A2D.8 920.00 5285.57
8. C06E1.6 fipr-16 885.00 5084.48 Fungus-induced-related protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P34301]
9. F02E11.5 scl-15 885.00 5084.48 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_494496]
10. Y38A10A.5 crt-1 885.00 5084.48 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
11. Y69H2.3 Y69H2.3 885.00 5084.48
12. M03F4.2 act-4 828.00 4757.01 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
13. T04C12.4 act-3 828.00 4757.01 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
14. K03D3.5 K03D3.5 804.00 4619.12
15. T27E9.1 ant-1.1 782.00 4492.73 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
16. F54C1.7 pat-10 743.00 4268.67 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
17. Y48A6B.4 fipr-17 743.00 4268.67 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_499414]
18. F36F12.6 clec-208 708.00 4067.59 C-type LECtin [Source:RefSeq peptide;Acc:NP_503569]
19. ZK39.3 clec-94 693.00 3981.41 C-type LECtin [Source:RefSeq peptide;Acc:NP_492867]
20. F07A5.7 unc-15 678.00 3895.23 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
21. Y105E8B.1 lev-11 678.00 3895.23 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
22. F35D11.8 clec-137 664.00 3814.80 C-type LECtin [Source:RefSeq peptide;Acc:NP_494814]
23. W02D7.10 clec-219 664.00 3814.80 C-type LECtin [Source:RefSeq peptide;Acc:NP_505148]
24. F09F7.2 mlc-3 651.00 3740.11 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
25. C49C3.12 clec-197 616.00 3539.03 C-type LECtin [Source:RefSeq peptide;Acc:NP_503090]
26. RIT1P.48 616.00 3539.03
27. C17F4.7 C17F4.7 605.00 3475.83
28. C36E6.3 mlc-1 605.00 3475.83 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
29. T25F10.6 clik-1 584.00 3355.19 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
30. Y82E9BR.3 Y82E9BR.3 584.00 3355.19 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
31. C49C3.11 C49C3.11 575.00 3303.48
32. E04A4.7 cyc-2.1 575.00 3303.48 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
33. K08D12.6 K08D12.6 565.00 3246.03
34. Y52B11A.5 clec-92 548.00 3148.36 C-type LECtin [Source:RefSeq peptide;Acc:NP_492857]
35. D1022.2 D1022.2 539.00 3096.65
36. RIT5M.1146 539.00 3096.65
37. W06H8.8 ttn-1 539.00 3096.65 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
38. H14A12.7 fipr-18 531.00 3050.69 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001033367]
39. M7.9 M7.9 531.00 3050.69
40. T20B3.2 tni-3 531.00 3050.69 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
41. Y39B6A.1 Y39B6A.1 531.00 3050.69
42. F52H3.7 lec-2 501.00 2878.34 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
43. T27E4.8 hsp-16.1 494.00 2838.12 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
44. H14A12.6 fipr-20 481.00 2763.43 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001033366]
45. T27E4.2 hsp-16.11 481.00 2763.43 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
46. Y41C4A.5 pqn-84 481.00 2763.43 Galectin [Source:RefSeq peptide;Acc:NP_499514]
47. C07A12.4 pdi-2 474.00 2723.22 Protein disulfide-isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q17770]
48. C50F4.3 tag-329 474.00 2723.22
49. C15H9.6 hsp-3 450.00 2585.33 Heat shock 70 kDa protein C [Source:UniProtKB/Swiss-Prot;Acc:P27420]
50. Y46G5A.23 Y46G5A.23 428.00 2458.94
51. F46H5.3 F46H5.3 417.00 2395.74 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
52. F53A9.10 tnt-2 417.00 2395.74 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
53. ZK39.8 clec-99 417.00 2395.74 C-type LECtin [Source:RefSeq peptide;Acc:NP_492872]
54. F28H1.2 cpn-3 407.00 2338.29 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
55. F49F1.11 F49F1.11 407.00 2338.29 Galectin [Source:RefSeq peptide;Acc:NP_500492]
56. K10B3.9 mai-1 407.00 2338.29 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
57. T04C12.5 act-2 407.00 2338.29 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
58. Y94H6A.10 Y94H6A.10 402.00 2309.56
59. RIT5P.1066 398.00 2286.58
60. W09G10.6 clec-125 398.00 2286.58 C-type LECtin [Source:RefSeq peptide;Acc:NP_494566]
61. ZK1290.1 ZK1290.1 398.00 2286.58
62. Y43B11AR.1 Y43B11AR.1 393.00 2257.86
63. C09G12.5 C09G12.5 388.00 2229.13
64. F08B6.4 unc-87 384.00 2206.15 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
65. F42A6.2 F42A6.2 384.00 2206.15
66. K10C2.4 fah-1 379.00 2177.42 FumarylAcetoacetate Hydrolase [Source:RefSeq peptide;Acc:NP_509083]
67. ZK39.2 clec-95 379.00 2177.42 C-type LECtin [Source:RefSeq peptide;Acc:NP_492868]
68. F31E3.5 eef-1A.1 358.00 2056.77 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
69. H06O01.1 pdi-3 350.00 2010.81
70. RIT5P.2099 350.00 2010.81
71. Y69F12A.3 fipr-19 346.00 1987.83 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001033380]
72. C06A8.3 C06A8.3 335.00 1924.64
73. C39E9.5 scl-7 328.00 1884.42 SCP-Like extracellular protein [Source:RefSeq peptide;Acc:NP_502509]
74. C09B8.6 hsp-25 324.00 1861.44 Heat Shock Protein [Source:RefSeq peptide;Acc:NP_001024374]
75. R10E11.8 vha-1 324.00 1861.44 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
76. T05E11.5 imp-2 324.00 1861.44 Intramembrane protease 2 [Source:UniProtKB/Swiss-Prot;Acc:P49049]
77. R05G6.7 vdac-1 317.00 1821.22 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
78. T09F5.9 clec-47 317.00 1821.22 C-type LECtin [Source:RefSeq peptide;Acc:NP_506744]
79. C35B1.3 C35B1.3 314.00 1803.99
80. F01G4.6 F01G4.6 310.00 1781.01 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
81. C36E6.5 mlc-2 304.00 1746.53 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
82. F02A9.2 far-1 304.00 1746.53 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
83. F52D10.3 ftt-2 304.00 1746.53 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
84. RIT1P.688 304.00 1746.53
85. ZK721.2 unc-27 304.00 1746.53 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
86. C34E10.6 atp-2 300.00 1723.55 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
87. F35D11.9 clec-138 294.00 1689.08 C-type LECtin [Source:RefSeq peptide;Acc:NP_494815]
88. F54E7.2 rps-12 294.00 1689.08 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
89. C05C10.1 pho-10 291.00 1671.85 Putative acid phosphatase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q09448]
90. F35D11.7 clec-136 291.00 1671.85 C-type LECtin [Source:RefSeq peptide;Acc:NP_494813]
91. Y119D3B.21 Y119D3B.21 291.00 1671.85
92. Y69A2AR.18 Y69A2AR.18 291.00 1671.85
93. B0213.2 nlp-27 288.00 1654.61 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
94. Y47D7A.11 Y47D7A.11 288.00 1654.61
95. K02F2.2 ahcy-1 279.00 1602.91 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
96. M7.10 M7.10 279.00 1602.91
97. Y105E8A.16 rps-20 276.00 1585.67 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
98. C49F5.1 sams-1 273.00 1568.43 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
99. F27C1.7 atp-3 267.00 1533.96 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
100. K11D9.2 sca-1 267.00 1533.96 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA