C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male2, section s39.

Sample reads: 4,805. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. R13H9.4 msp-53 68.20 14192.31 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
2. H12D21.13 nspa-4 58.00 12069.70 Nematode Specific Peptide family, group A [Source:RefSeq peptide;Acc:NP_506664]
3. R13H9.2 msp-57 55.50 11549.46 Major sperm protein 55/57 [Source:UniProtKB/Swiss-Prot;Acc:Q17856]
4. ZK354.5 msp-51 51.80 10779.49 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
5. ZK354.1 msp-65 42.20 8781.75 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
6. R05F9.12 aagr-2 41.00 8532.03 Acid Alpha Glucosidase Relate [Source:RefSeq peptide;Acc:NP_494897]
7. ZK354.4 msp-113 39.90 8303.12 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
8. Y59E9AR.1 Y59E9AR.1 38.70 8053.41 Major sperm protein [Source:RefSeq peptide;Acc:NP_500755]
9. Y59E9AR.7 Y59E9AR.7 38.70 8053.41 Major sperm protein [Source:RefSeq peptide;Acc:NP_500755]
10. ZK354.11 msp-59 38.70 8053.41 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
11. K07F5.1 msp-81 37.60 7824.50 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
12. C09B9.6 msp-55 34.10 7096.15 Major sperm protein 55/57 [Source:UniProtKB/Swiss-Prot;Acc:Q17856]
13. C04G2.4 msp-36 33.00 6867.25 Major sperm protein 10/36/56/76 [Source:UniProtKB/Swiss-Prot;Acc:P05634]
14. F58A6.8 msp-45 33.00 6867.25 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
15. T13F2.11 msp-78 33.00 6867.25 Major sperm protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q94053]
16. C04G2.8 spch-1 30.70 6388.62 SPerm CHromatin enriched [Source:RefSeq peptide;Acc:NP_501837]
17. F32B6.6 msp-77 30.70 6388.62 Major sperm protein 77/79 [Source:UniProtKB/Swiss-Prot;Acc:Q9TVW5]
18. F36H12.7 msp-19 30.70 6388.62 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
19. T13F2.10 msp-79 30.70 6388.62 Major sperm protein 77/79 [Source:UniProtKB/Swiss-Prot;Acc:Q9TVW5]
20. K07F5.3 msp-56 29.60 6159.71 Major sperm protein 10/36/56/76 [Source:UniProtKB/Swiss-Prot;Acc:P05634]
21. R05F9.8 msp-33 29.60 6159.71 Major sperm protein 33 [Source:UniProtKB/Swiss-Prot;Acc:P53019]
22. R05F9.13 msp-31 28.50 5930.80 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
23. RIT4P.1139 28.50 5930.80
24. T28H11.1 ssq-4 28.50 5930.80 Sperm-Specific family, class Q [Source:RefSeq peptide;Acc:NP_500704]
25. K07F5.2 msp-10 27.40 5701.89 Major sperm protein 10/36/56/76 [Source:UniProtKB/Swiss-Prot;Acc:P05634]
26. ZK484.8 nspd-1 26.30 5472.99 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_491759]
27. K07F5.5 nspd-2 24.00 4994.36 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_501763]
28. F26G1.7 msp-3 23.00 4786.26 Major sperm protein 3 [Source:UniProtKB/Swiss-Prot;Acc:Q19832]
29. K07F5.11 ssq-1 23.00 4786.26 Sperm-Specific family, class Q [Source:RefSeq peptide;Acc:NP_501768]
30. E03H12.10 ssp-9 21.90 4557.35 Sperm-specific class P protein 9/11 [Source:UniProtKB/Swiss-Prot;Acc:Q23058]
31. T27A3.4 spch-3 21.90 4557.35 SPerm CHromatin enriched [Source:RefSeq peptide;Acc:NP_491760]
32. Y59E9AL.6 Y59E9AL.6 21.90 4557.35
33. Y59H11AM.1 Y59H11AM.1 21.90 4557.35 Major sperm protein [Source:RefSeq peptide;Acc:NP_501464]
34. ZK1251.6 msp-76 21.90 4557.35 Major sperm protein 10/36/56/76 [Source:UniProtKB/Swiss-Prot;Acc:P05634]
35. C34F11.6 msp-49 20.80 4328.45 Major sperm protein 49 [Source:UniProtKB/Swiss-Prot;Acc:Q18461]
36. C33F10.9 msp-40 19.70 4099.54 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
37. C35D10.11 msd-4 19.70 4099.54 Major Sperm protein Domain containing [Source:RefSeq peptide;Acc:NP_498015]
38. F44D12.5 msd-2 19.70 4099.54 Major Sperm protein Domain containing [Source:RefSeq peptide;Acc:NP_501811]
39. T28H11.6 ssp-11 19.70 4099.54 Sperm-specific class P protein 9/11 [Source:UniProtKB/Swiss-Prot;Acc:Q23058]
40. T23B7.1 nspd-4 18.60 3870.63 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_494871]
41. C17F3.1 C17F3.1 17.60 3662.53
42. K07F5.9 ssp-10 17.60 3662.53 Sperm-specific class P protein 10 [Source:UniProtKB/Swiss-Prot;Acc:Q21289]
43. K08F4.8 msp-38 17.60 3662.53 Major sperm protein 38 [Source:UniProtKB/Swiss-Prot;Acc:P53020]
44. ZK484.5 ZK484.5 17.60 3662.53
45. ZK546.6 msp-152 17.60 3662.53 Major sperm protein 152 [Source:UniProtKB/Swiss-Prot;Acc:Q23519]
46. T13F2.9 T13F2.9 16.50 3433.62
47. T28H11.5 ssq-2 16.50 3433.62 Sperm-Specific family, class Q [Source:RefSeq peptide;Acc:NP_500698]
48. C24D10.7 nspd-3 15.40 3204.71 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_500730]
49. E03H12.5 E03H12.5 15.40 3204.71
50. F17E9.5 F17E9.5 15.40 3204.71
51. F32B6.5 sss-1 15.40 3204.71 Sperm-Specific family, class S [Source:RefSeq peptide;Acc:NP_501780]
52. F44D12.4 gipc-2 15.40 3204.71 GIPC (RGS-GAIP Interacting Protein C) homolog [Source:RefSeq peptide;Acc:NP_501810]
53. Y69E1A.2 Y69E1A.2 15.40 3204.71
54. C24D10.8 nspd-6 14.40 2996.62 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_500730]
55. T04C12.6 act-1 14.40 2996.62 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
56. C04G2.9 C04G2.9 13.30 2767.71
57. Y59E9AL.3 Y59E9AL.3 13.30 2767.71
58. ZC477.1 ssq-3 13.30 2767.71 Sperm-Specific family, class Q [Source:RefSeq peptide;Acc:NP_501113]
59. ZK1248.6 msp-64 13.30 2767.71 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
60. C39H7.1 C39H7.1 12.30 2559.61
61. D2062.7 D2062.7 12.30 2559.61
62. F11G11.8 nspd-5 12.30 2559.61 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_494871]
63. T23B3.5 T23B3.5 12.30 2559.61
64. T23G11.1 T23G11.1 12.30 2559.61
65. T27A3.3 ssp-16 12.30 2559.61 Sperm-specific class P protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P91499]
66. Y43C5A.1 nspd-7 12.30 2559.61 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_501882]
67. F44D12.7 msd-3 11.20 2330.70 Major Sperm protein Domain containing [Source:RefSeq peptide;Acc:NP_501808]
68. T04C12.4 act-3 11.20 2330.70 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
69. T27E9.1 ant-1.1 11.20 2330.70 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
70. E04A4.7 cyc-2.1 10.20 2122.60 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
71. C53B4.5 col-119 9.14 1902.02 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
72. F44D12.3 msd-1 9.14 1902.02 Major Sperm protein Domain containing [Source:RefSeq peptide;Acc:NP_501808]
73. H12D21.1 nspa-1 9.14 1902.02 Nematode Specific Peptide family, group A [Source:RefSeq peptide;Acc:NP_506666]
74. W03D8.9 W03D8.9 9.14 1902.02
75. Y105E8B.1 lev-11 9.14 1902.02 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
76. Y82E9BR.3 Y82E9BR.3 9.14 1902.02 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
77. ZK354.2 ZK354.2 9.14 1902.02
78. C01G12.8 catp-4 8.11 1687.68 Sodium/potassium-transporting ATPase subunit alpha [Source:RefSeq peptide;Acc:NP_497034]
79. C41G7.6 C41G7.6 8.11 1687.68
80. C48E7.7 C48E7.7 8.11 1687.68
81. F07A5.2 F07A5.2 8.11 1687.68
82. F10C1.3 F10C1.3 8.11 1687.68
83. F11G11.11 col-20 8.11 1687.68 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
84. F11H8.3 col-8 8.11 1687.68 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
85. F26F12.1 col-140 8.11 1687.68 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
86. R10E9.2 R10E9.2 8.11 1687.68
87. RIT1M.1111 8.11 1687.68
88. RIT4P.910 8.11 1687.68
89. T25F10.6 clik-1 8.11 1687.68 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
90. T28H11.7 T28H11.7 8.11 1687.68
91. Y106G6H.13 Y106G6H.13 8.11 1687.68
92. Y38C1AA.7 Y38C1AA.7 8.11 1687.68
93. Y59E9AL.2 Y59E9AL.2 8.11 1687.68
94. Y77E11A.15 col-106 8.11 1687.68 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
95. C04F12.7 C04F12.7 7.08 1473.34
96. F18C5.4 mpz-3 7.08 1473.34 Multiple PDZ domain protein [Source:RefSeq peptide;Acc:NP_495325]
97. F32A11.3 F32A11.3 7.08 1473.34
98. F47B8.11 sss-2 7.08 1473.34
99. F54C1.7 pat-10 7.08 1473.34 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
100. K02F2.2 ahcy-1 7.08 1473.34 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA