C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male2, section s12.

Sample reads: 43,221. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K08D12.6 K08D12.6 358.00 8282.99
2. F11H8.3 col-8 321.00 7426.93 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
3. T04C12.6 act-1 270.00 6246.95 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. T27E9.1 ant-1.1 245.00 5668.53 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
5. Y82E9BR.3 Y82E9BR.3 221.00 5113.24 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
6. K02F2.2 ahcy-1 216.00 4997.56 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
7. T05A1.2 col-122 216.00 4997.56 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
8. F11C3.3 unc-54 209.00 4835.60 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
9. F11G11.11 col-20 209.00 4835.60 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
10. F26F12.1 col-140 204.00 4719.92 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
11. T04C12.4 act-3 204.00 4719.92 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
12. C34E10.6 atp-2 185.00 4280.32 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
13. Y105E8B.1 lev-11 185.00 4280.32 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
14. C53B4.5 col-119 181.00 4187.77 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
15. C24F3.6 col-124 177.00 4095.22 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
16. F02A9.3 far-2 175.00 4048.95 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
17. C34F6.2 col-178 169.00 3910.13 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
18. K10B3.9 mai-1 160.00 3701.89 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
19. F07A5.7 unc-15 156.00 3609.35 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
20. M03F4.2 act-4 156.00 3609.35 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
21. Y77E11A.15 col-106 154.00 3563.07 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
22. C06A8.3 C06A8.3 152.00 3516.80
23. C34F6.3 col-179 152.00 3516.80 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
24. W03G11.1 col-181 145.00 3354.84 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
25. K09F5.3 spp-14 143.00 3308.57 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001041271]
26. F13D12.6 F13D12.6 142.00 3285.43 Uncharacterized serine carboxypeptidase F13S12.6 [Source:UniProtKB/Swiss-Prot;Acc:P52715]
27. ZK721.2 unc-27 137.00 3169.75 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
28. F28H1.2 cpn-3 130.00 3007.79 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
29. F46H5.3 F46H5.3 127.00 2938.38 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
30. RIT1P.688 127.00 2938.38
31. F57B1.4 col-160 125.00 2892.11 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
32. T25F10.6 clik-1 120.00 2776.42 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
33. R10E11.8 vha-1 112.00 2591.33 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
34. E04A4.7 cyc-2.1 111.00 2568.19 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
35. Y94H6A.10 Y94H6A.10 111.00 2568.19
36. F54C1.7 pat-10 109.00 2521.92 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
37. Y39B6A.20 asp-1 109.00 2521.92 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
38. F09F7.2 mlc-3 103.00 2383.09 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
39. ZK1193.1 col-19 103.00 2383.09 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
40. T25C8.2 act-5 102.00 2359.96 ACTin [Source:RefSeq peptide;Acc:NP_499809]
41. F15A2.1 col-184 100.00 2313.68 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
42. C36E6.3 mlc-1 98.60 2281.29 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
43. T15B7.3 col-143 98.60 2281.29 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
44. T27E4.2 hsp-16.11 98.60 2281.29 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
45. T27E4.8 hsp-16.1 98.60 2281.29 Heat shock protein Hsp-16.1/Hsp-16.11 [Source:UniProtKB/Swiss-Prot;Acc:P34696]
46. Y38H6C.1 dct-16 98.60 2281.29 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
47. R05G6.7 vdac-1 97.20 2248.90 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
48. H28O16.1 H28O16.1 95.70 2214.20 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
49. F31E3.5 eef-1A.1 92.80 2147.10 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
50. C06B8.8 rpl-38 91.40 2114.71 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
51. C55B7.4 acdh-1 91.40 2114.71 Acyl CoA DeHydrogenase [Source:RefSeq peptide;Acc:NP_491871]
52. Y75B12B.2 cyn-7 91.40 2114.71 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
53. F21F8.7 asp-6 90.00 2082.32 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
54. W07B8.5 cpr-5 90.00 2082.32 Cathepsin B-like cysteine proteinase 5 [Source:UniProtKB/Swiss-Prot;Acc:P43509]
55. W09C5.6 rpl-31 90.00 2082.32 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
56. F52H3.7 lec-2 88.60 2049.92 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
57. T20G5.2 cts-1 87.20 2017.53 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
58. F54E7.2 rps-12 85.80 1985.14 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
59. T21B10.2 enol-1 83.00 1920.36 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
60. F25H2.5 ndk-1 80.20 1855.57 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
61. F56H9.2 F56H9.2 80.20 1855.57
62. VC5.3 npa-1 80.20 1855.57 Nematode Polyprotein Allergen related [Source:RefSeq peptide;Acc:NP_504795]
63. C36E6.5 mlc-2 78.90 1825.50 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
64. F28D1.7 rps-23 78.90 1825.50 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
65. F14F7.1 col-98 77.50 1793.11 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
66. F52D10.3 ftt-2 77.50 1793.11 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
67. C09G5.5 col-80 76.20 1763.03 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
68. F25A2.1 F25A2.1 76.20 1763.03
69. F37C12.4 rpl-36 76.20 1763.03 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
70. Y69A2AR.18 Y69A2AR.18 76.20 1763.03
71. F56A4.2 F56A4.2 74.80 1730.64 C-type LECtin [Source:RefSeq peptide;Acc:NP_503650]
72. R53.4 R53.4 73.50 1700.56 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
73. T04C12.5 act-2 73.50 1700.56 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
74. Y119D3B.21 Y119D3B.21 72.20 1670.48
75. B0513.3 rpl-29 70.80 1638.09 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
76. C14B9.7 rpl-21 70.80 1638.09 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
77. D1007.6 rps-10 69.50 1608.01 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
78. M18.1 col-129 69.50 1608.01 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
79. B0041.4 rpl-4 68.20 1577.93 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
80. C49F5.1 sams-1 68.20 1577.93 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
81. F01G12.5 let-2 68.20 1577.93 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
82. F01G4.6 F01G4.6 68.20 1577.93 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
83. F08B6.4 unc-87 68.20 1577.93 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
84. F20B6.2 vha-12 68.20 1577.93 Probable V-type proton ATPase subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q19626]
85. F40F11.1 rps-11 68.20 1577.93 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
86. K02B2.5 rps-25 68.20 1577.93 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
87. R11A5.4 pck-2 68.20 1577.93 Phosphoenolypyruvate CarboxyKinase [Source:RefSeq peptide;Acc:NP_001021587]
88. C04F12.4 rpl-14 66.90 1547.85 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
89. F20H11.3 mdh-2 65.60 1517.78 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
90. F42C5.8 rps-8 65.60 1517.78 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
91. Y19D10A.9 clec-209 65.60 1517.78 C-type LECtin [Source:RefSeq peptide;Acc:NP_503650]
92. C42C1.14 rpl-34 64.40 1490.01 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
93. C45B2.1 C45B2.1 64.40 1490.01
94. F26E4.6 F26E4.6 64.40 1490.01
95. F39B2.6 rps-26 64.40 1490.01 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
96. F46F11.5 vha-10 64.40 1490.01 Probable V-type proton ATPase subunit G [Source:UniProtKB/Swiss-Prot;Acc:P91303]
97. F56E10.4 rps-27 64.40 1490.01 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
98. W07G4.4 lap-2 64.40 1490.01 Putative aminopeptidase W07G4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q27245]
99. C17H12.14 vha-8 63.10 1459.93 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
100. F26D10.3 hsp-1 63.10 1459.93 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA