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Experiment herm4, section s6.

Sample reads: 20,426. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. M03F4.2 act-4 388.00 18995.17 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
2. T04C12.4 act-3 350.00 17134.81 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. Y105E8B.1 lev-11 321.00 15715.07 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
4. F11C3.3 unc-54 317.00 15519.25 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
5. T27E9.1 ant-1.1 294.00 14393.24 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
6. F07A5.7 unc-15 282.00 13805.76 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
7. R06C7.10 myo-1 238.00 11651.67 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
8. F09F7.2 mlc-3 233.00 11406.89 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
9. T04C12.6 act-1 225.00 11015.24 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
10. F02A9.3 far-2 214.00 10476.72 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
11. Y82E9BR.3 Y82E9BR.3 167.00 8175.75 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
12. C06A8.3 C06A8.3 162.00 7930.97
13. T18D3.4 myo-2 162.00 7930.97 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
14. K08D12.6 K08D12.6 154.00 7539.32
15. C36E6.3 mlc-1 125.00 6119.58 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
16. W06H8.8 ttn-1 123.00 6021.66 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
17. Y69A2AR.18 Y69A2AR.18 120.00 5874.79
18. C53C9.2 C53C9.2 115.00 5630.01
19. F52H3.7 lec-2 115.00 5630.01 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
20. F11E6.3 F11E6.3 111.00 5434.18
21. C34E10.6 atp-2 95.70 4685.15 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
22. T28D6.3 T28D6.3 95.70 4685.15
23. F01G4.6 F01G4.6 94.30 4616.61 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
24. C18A11.7 dim-1 92.80 4543.17 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
25. F46H5.3 F46H5.3 90.00 4406.10 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
26. C10G8.5 ncx-2 88.60 4337.56 Na/Ca eXchangers [Source:RefSeq peptide;Acc:NP_504414]
27. W03F8.1 tni-4 88.60 4337.56 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
28. Y73B6BL.24 acp-6 88.60 4337.56 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
29. F10C1.2 ifb-1 87.20 4269.02 Intermediate filament protein ifb-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19289]
30. F54C1.7 pat-10 87.20 4269.02 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
31. H28O16.1 H28O16.1 84.40 4131.94 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
32. R05G6.7 vdac-1 78.90 3862.68 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
33. T20B3.2 tni-3 78.90 3862.68 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
34. T20G5.2 cts-1 78.90 3862.68 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
35. F20H11.3 mdh-2 77.50 3794.14 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
36. T25F10.6 clik-1 76.20 3730.49 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
37. F27C1.7 atp-3 72.20 3534.67 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
38. ZC15.8 pqn-94 72.20 3534.67 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
39. E04A4.7 cyc-2.1 70.80 3466.13 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
40. F13D12.4 alh-8 70.80 3466.13 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
41. C36E6.5 mlc-2 65.60 3211.55 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
42. T04C12.5 act-2 65.60 3211.55 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
43. F47B7.1 F47B7.1 61.80 3025.52 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
44. F53A9.10 tnt-2 61.80 3025.52 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
45. T23E7.2 T23E7.2 61.80 3025.52
46. F08B6.4 unc-87 59.30 2903.13 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
47. T05A1.2 col-122 59.30 2903.13 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
48. K10B3.9 mai-1 58.00 2839.48 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
49. F23H12.9 fipr-2 55.50 2717.09 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_872150]
50. F32A5.4 F32A5.4 55.50 2717.09
51. Y67H2A.5 Y67H2A.5 55.50 2717.09
52. F52D10.3 ftt-2 54.30 2658.34 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
53. F01G12.5 let-2 51.80 2535.95 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
54. F22E10.3 pgp-14 51.80 2535.95 P-GlycoProtein related [Source:RefSeq peptide;Acc:NP_510128]
55. F49E2.5 F49E2.5 50.60 2477.20
56. F02A9.2 far-1 49.40 2418.46 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
57. F25H2.5 ndk-1 49.40 2418.46 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
58. W02F12.5 dlst-1 48.20 2359.71 DihydroLipoamide S-SuccinylTransferase [Source:RefSeq peptide;Acc:NP_504700]
59. ZC449.5 ZC449.5 48.20 2359.71
60. F29B9.11 F29B9.11 47.00 2300.96
61. R02F11.4 R02F11.4 47.00 2300.96
62. C14B9.1 hsp-12.2 45.80 2242.21 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
63. C03G5.1 sdha-1 44.60 2183.46 Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09508]
64. F28H1.2 cpn-3 44.60 2183.46 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
65. F42G8.12 isp-1 44.60 2183.46 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
66. M02F4.8 aqp-7 43.40 2124.72 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_508515]
67. ZC477.9 deb-1 43.40 2124.72 Vinculin [Source:UniProtKB/Swiss-Prot;Acc:P19826]
68. C24H10.5 cal-5 42.20 2065.97 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_508864]
69. F58G4.1 myo-5 42.20 2065.97 MYOsin heavy chain structural genes [Source:RefSeq peptide;Acc:NP_505094]
70. T08B1.2 tnt-4 42.20 2065.97 TropoNin T [Source:RefSeq peptide;Acc:NP_001263832]
71. F26E4.6 F26E4.6 41.00 2007.22
72. M18.1 col-129 41.00 2007.22 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
73. C24F3.6 col-124 38.70 1894.62 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
74. F13C5.5 F13C5.5 38.70 1894.62
75. F25H5.3 pyk-1 38.70 1894.62 Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
76. ZC116.1 ZC116.1 38.70 1894.62
77. F33A8.3 cey-1 37.60 1840.77 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
78. F43G9.1 idha-1 37.60 1840.77 Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q93714]
79. C01G6.1 aqp-2 36.40 1782.02 AQuaPorin or aquaglyceroporin related [Source:RefSeq peptide;Acc:NP_495972]
80. C45B2.1 C45B2.1 36.40 1782.02
81. R53.4 R53.4 36.40 1782.02 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
82. T17H7.4 pat-12 36.40 1782.02 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_497245]
83. T22B11.5 ogdh-1 36.40 1782.02 2-oxoglutarate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O61199]
84. W09C5.8 W09C5.8 36.40 1782.02
85. ZK669.3 ZK669.3 35.30 1728.17 GILT-like protein ZK669.3 [Source:UniProtKB/Swiss-Prot;Acc:Q23570]
86. C06H2.1 atp-5 34.10 1669.42 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_505829]
87. C24A3.2 C24A3.2 34.10 1669.42
88. C44B12.2 ost-1 34.10 1669.42 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
89. C49F5.1 sams-1 34.10 1669.42 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
90. C53A5.1 ril-1 34.10 1669.42 RNAi-Induced Longevity [Source:RefSeq peptide;Acc:NP_506598]
91. K02A4.1 bcat-1 34.10 1669.42 Branched-chain-amino-acid aminotransferase, cytosolic [Source:UniProtKB/Swiss-Prot;Acc:P54688]
92. K11D9.2 sca-1 34.10 1669.42 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
93. LLC1.3 dld-1 34.10 1669.42 Dihydrolipoyl dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O17953]
94. C09D1.1 unc-89 33.00 1615.57 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
95. F26F12.1 col-140 33.00 1615.57 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
96. K02F2.2 ahcy-1 33.00 1615.57 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
97. R10E11.8 vha-1 33.00 1615.57 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
98. ZK973.6 anc-1 33.00 1615.57 Nuclear anchorage protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4M4]
99. B0350.2 unc-44 31.80 1556.82 AO66 ankyrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECZ1]
100. F56D2.1 ucr-1 31.80 1556.82 Cytochrome b-c1 complex subunit 1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P98080]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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