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Experiment herm4, section s37.

Sample reads: 132,882. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F31E3.5 eef-1A.1 1010.00 7600.71 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
2. F13B10.2 rpl-3 605.00 4552.90 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
3. D1054.11 D1054.11 594.00 4470.12
4. F54E7.2 rps-12 594.00 4470.12 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
5. F42C5.8 rps-8 556.00 4184.15 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
6. Y24D9A.4 rpl-7A 556.00 4184.15 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
7. B0041.4 rpl-4 548.00 4123.95 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
8. F25H2.5 ndk-1 474.00 3567.07 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
9. ZC434.2 rps-7 450.00 3386.46 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
10. F40F11.1 rps-11 444.00 3341.30 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
11. RIT1P.688 444.00 3341.30
12. Y71F9AL.13 rpl-1 444.00 3341.30 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
13. C49H3.11 rps-2 428.00 3220.90 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
14. Y62H9A.6 Y62H9A.6 428.00 3220.90
15. C04F12.4 rpl-14 422.00 3175.74 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
16. C42C1.14 rpl-34 417.00 3138.12 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
17. W09C5.6 rpl-31 407.00 3062.86 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
18. Y105E8A.16 rps-20 407.00 3062.86 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
19. Y71A12B.1 rps-6 402.00 3025.23 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
20. R13A5.8 rpl-9 398.00 2995.13 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
21. E04A4.7 cyc-2.1 393.00 2957.50 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
22. ZK813.3 ZK813.3 393.00 2957.50
23. F10B5.1 rpl-10 379.00 2852.15 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
24. F36A2.6 rps-15 375.00 2822.05 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
25. ZK813.7 ZK813.7 375.00 2822.05
26. F56E10.4 rps-27 366.00 2754.32 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
27. Y37D8A.19 Y37D8A.19 362.00 2724.22
28. B0393.1 rps-0 350.00 2633.91 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
29. D1007.6 rps-10 350.00 2633.91 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
30. T27E9.1 ant-1.1 350.00 2633.91 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
31. T04C12.4 act-3 346.00 2603.81 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
32. F39B2.6 rps-26 342.00 2573.71 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
33. T07A9.14 T07A9.14 339.00 2551.13
34. B0250.1 rpl-2 335.00 2521.03 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
35. Y18D10A.17 car-1 335.00 2521.03 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
36. F52B5.6 rpl-25.2 331.00 2490.93 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
37. T04C12.6 act-1 331.00 2490.93 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
38. Y45F10D.12 rpl-18 331.00 2490.93 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
39. F55B11.2 F55B11.2 328.00 2468.35
40. C14B9.7 rpl-21 324.00 2438.25 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
41. F54C9.5 rpl-5 321.00 2415.67 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
42. M01F1.2 rpl-16 321.00 2415.67 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
43. ZK813.1 ZK813.1 310.00 2332.89
44. F28C6.7 rpl-26 307.00 2310.32 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
45. Y82E9BR.3 Y82E9BR.3 307.00 2310.32 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
46. K07H8.10 K07H8.10 304.00 2287.74
47. R05G6.7 vdac-1 304.00 2287.74 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
48. R09B3.3 R09B3.3 300.00 2257.64
49. F02A9.3 far-2 297.00 2235.06 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
50. K11H12.2 rpl-15 297.00 2235.06 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
51. Y75B12B.2 cyn-7 288.00 2167.33 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
52. F37C12.4 rpl-36 285.00 2144.76 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
53. T22F3.4 rpl-11.1 285.00 2144.76 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
54. C06B8.8 rpl-38 282.00 2122.18 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
55. F37C12.9 rps-14 282.00 2122.18 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
56. F40F8.10 rps-9 282.00 2122.18 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
57. F53G12.10 rpl-7 276.00 2077.03 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
58. Y106G6H.2 pab-1 276.00 2077.03 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
59. ZC373.2 ZC373.2 276.00 2077.03
60. D2096.8 nap-1 273.00 2054.45 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
61. D1054.10 D1054.10 270.00 2031.87
62. Y43B11AR.4 rps-4 261.00 1964.14 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
63. C07H6.5 cgh-1 259.00 1949.09 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
64. F46F11.2 cey-2 259.00 1949.09 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
65. C56C10.8 icd-1 256.00 1926.52 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
66. Y62H9A.5 Y62H9A.5 256.00 1926.52
67. F28D1.7 rps-23 253.00 1903.94 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
68. F25H2.10 rla-0 251.00 1888.89 60S acidic ribosomal protein P0 [Source:UniProtKB/Swiss-Prot;Acc:Q93572]
69. M03F4.2 act-4 251.00 1888.89 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
70. R151.3 rpl-6 248.00 1866.31 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
71. Y48B6A.14 hmg-1.1 248.00 1866.31 HMG [Source:RefSeq peptide;Acc:NP_496970]
72. K02B2.5 rps-25 245.00 1843.74 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
73. Y48B6A.2 rpl-43 245.00 1843.74 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
74. F56F3.5 rps-1 243.00 1828.69 40S ribosomal protein S3a [Source:UniProtKB/Swiss-Prot;Acc:P48154]
75. F57B9.5 byn-1 240.00 1806.11 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
76. T01C3.6 rps-16 240.00 1806.11 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
77. B0513.3 rpl-29 238.00 1791.06 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
78. C09H10.2 rpl-41 235.00 1768.48 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
79. F53A3.3 rps-22 235.00 1768.48 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
80. T04C12.5 act-2 235.00 1768.48 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
81. T05F1.3 rps-19 233.00 1753.43 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
82. C16A3.9 rps-13 230.00 1730.86 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
83. T05E11.1 rps-5 230.00 1730.86 40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041]
84. ZK652.4 rpl-35 230.00 1730.86 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
85. C34E10.6 atp-2 225.00 1693.23 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
86. F10E7.7 rpl-33 221.00 1663.13 60S ribosomal protein L35a [Source:UniProtKB/Swiss-Prot;Acc:P49180]
87. Y113G7B.17 prmt-1 216.00 1625.50 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
88. C47E8.11 C47E8.11 214.00 1610.45
89. W02D9.7 W02D9.7 211.00 1587.87
90. W08E12.7 W08E12.7 211.00 1587.87
91. H02I12.1 cbd-1 209.00 1572.82 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
92. C23G10.3 rps-3 207.00 1557.77 40S ribosomal protein S3 [Source:UniProtKB/Swiss-Prot;Acc:P48152]
93. F26D10.3 hsp-1 207.00 1557.77 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
94. K02F2.2 ahcy-1 204.00 1535.19 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
95. K08D12.3 K08D12.3 204.00 1535.19
96. C32E8.2 rpl-13 202.00 1520.14 60S ribosomal protein L13 [Source:UniProtKB/Swiss-Prot;Acc:P91128]
97. ZK1010.1 ubq-2 202.00 1520.14 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
98. Y48G8AL.8 rpl-17 200.00 1505.09 60S ribosomal protein L17 [Source:UniProtKB/Swiss-Prot;Acc:Q9BL19]
99. K04D7.2 mspn-1 198.00 1490.04 Mitochondrial sorting homolog [Source:UniProtKB/Swiss-Prot;Acc:P54815]
100. C26F1.4 rps-30 194.00 1459.94 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_505007]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA