C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm4, section s14.

Sample reads: 85,420. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.6 act-1 605.00 7082.83 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. F31E3.5 eef-1A.1 594.00 6954.05 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
3. T04C12.4 act-3 548.00 6415.52 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
4. T27E9.1 ant-1.1 548.00 6415.52 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
5. M03F4.2 act-4 501.00 5865.28 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
6. T25C8.2 act-5 474.00 5549.19 ACTin [Source:RefSeq peptide;Acc:NP_499809]
7. F02A9.3 far-2 444.00 5197.97 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
8. F11C3.3 unc-54 444.00 5197.97 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
9. K02F2.2 ahcy-1 444.00 5197.97 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
10. W07B8.5 cpr-5 439.00 5139.44 Cathepsin B-like cysteine proteinase 5 [Source:UniProtKB/Swiss-Prot;Acc:P43509]
11. F13D12.6 F13D12.6 412.00 4823.35 Uncharacterized serine carboxypeptidase F13S12.6 [Source:UniProtKB/Swiss-Prot;Acc:P52715]
12. C16H3.2 lec-9 407.00 4764.81 Galectin [Source:RefSeq peptide;Acc:NP_510844]
13. R05G6.7 vdac-1 398.00 4659.45 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
14. W07G4.4 lap-2 393.00 4600.91 Putative aminopeptidase W07G4.4 [Source:UniProtKB/Swiss-Prot;Acc:Q27245]
15. Y82E9BR.3 Y82E9BR.3 393.00 4600.91 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
16. F13B10.2 rpl-3 388.00 4542.37 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
17. Y39B6A.20 asp-1 366.00 4284.82 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
18. B0041.4 rpl-4 342.00 4003.85 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
19. F13D12.4 alh-8 342.00 4003.85 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
20. F37B4.7 folt-2 342.00 4003.85 Folate-like transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:O45166]
21. Y119D3B.21 Y119D3B.21 339.00 3968.72
22. F42C5.8 rps-8 331.00 3875.07 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
23. C34E10.6 atp-2 328.00 3839.95 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
24. E04A4.7 cyc-2.1 328.00 3839.95 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
25. T25F10.6 clik-1 321.00 3758.00 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
26. F07A5.7 unc-15 317.00 3711.17 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
27. K10B3.9 mai-1 317.00 3711.17 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
28. C35B1.5 C35B1.5 314.00 3676.05
29. Y69A2AR.18 Y69A2AR.18 300.00 3512.15
30. F09F7.2 mlc-3 294.00 3441.90 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
31. Y105E8B.1 lev-11 288.00 3371.66 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
32. K08D12.6 K08D12.6 282.00 3301.42
33. C15H9.6 hsp-3 279.00 3266.30 Heat shock 70 kDa protein C [Source:UniProtKB/Swiss-Prot;Acc:P27420]
34. C07A12.4 pdi-2 270.00 3160.93 Protein disulfide-isomerase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q17770]
35. Y24D9A.4 rpl-7A 270.00 3160.93 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
36. Y38A10A.5 crt-1 267.00 3125.81 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
37. Y38H6C.1 dct-16 264.00 3090.69 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
38. T05G5.6 ech-6 259.00 3032.15 Probable enoyl-CoA hydratase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34559]
39. RIT1P.688 256.00 2997.03
40. ZK6.11 ZK6.11 256.00 2997.03
41. F01G4.6 F01G4.6 245.00 2868.25 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
42. T04C12.5 act-2 240.00 2809.72 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
43. F46H5.3 F46H5.3 235.00 2751.18 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
44. F54C1.7 pat-10 233.00 2727.77 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
45. F55D10.2 rpl-25.1 233.00 2727.77 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
46. Y71A12B.1 rps-6 233.00 2727.77 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
47. K07H8.6 vit-6 230.00 2692.64 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
48. Y94H6A.10 Y94H6A.10 228.00 2669.23
49. F25H2.5 ndk-1 223.00 2610.69 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
50. T20G5.2 cts-1 223.00 2610.69 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
51. F25A2.1 F25A2.1 221.00 2587.28
52. W09C5.6 rpl-31 221.00 2587.28 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
53. F36A2.6 rps-15 218.00 2552.16 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
54. F54E7.2 rps-12 218.00 2552.16 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
55. C49H3.11 rps-2 216.00 2528.74 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
56. F21F8.7 asp-6 214.00 2505.33 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
57. F32G8.6 cat-4 211.00 2470.21 GTP cyclohydrolase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q19980]
58. F27C1.7 atp-3 209.00 2446.79 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
59. C04F12.4 rpl-14 207.00 2423.38 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
60. F54C9.1 iff-2 204.00 2388.26 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
61. C36E6.3 mlc-1 194.00 2271.19 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
62. C42D8.2 vit-2 194.00 2271.19 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
63. F52D10.3 ftt-2 191.00 2236.07 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
64. R10E11.8 vha-1 191.00 2236.07 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
65. ZC434.2 rps-7 191.00 2236.07 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
66. D1007.6 rps-10 189.00 2212.65 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
67. F28C6.7 rpl-26 189.00 2212.65 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
68. K01D12.11 cdr-4 189.00 2212.65 CaDmium Responsive [Source:RefSeq peptide;Acc:NP_506110]
69. C18A11.7 dim-1 187.00 2189.24 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
70. F39B2.6 rps-26 185.00 2165.82 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
71. F40F11.1 rps-11 181.00 2118.99 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
72. Y71F9AL.13 rpl-1 181.00 2118.99 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
73. Y49A3A.3 Y49A3A.3 179.00 2095.58
74. M18.1 col-129 177.00 2072.17 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
75. Y105E8A.16 rps-20 177.00 2072.17 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
76. Y67H2A.5 Y67H2A.5 177.00 2072.17
77. Y45F10D.12 rpl-18 175.00 2048.75 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
78. B0250.1 rpl-2 173.00 2025.34 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
79. F59D8.2 vit-4 173.00 2025.34 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
80. C31C9.1 tag-10 171.00 2001.92 P52CeGA [Source:UniProtKB/TrEMBL;Acc:B8ZX16]
81. F22H10.3 F22H10.3 171.00 2001.92
82. C42C1.14 rpl-34 169.00 1978.51 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
83. F01G12.5 let-2 169.00 1978.51 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
84. F08B6.4 unc-87 167.00 1955.09 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
85. R13A5.8 rpl-9 167.00 1955.09 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
86. T18H9.2 asp-2 167.00 1955.09 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_505384]
87. ZK829.4 gdh-1 165.00 1931.68 Glutamate dehydrogenase [Source:RefSeq peptide;Acc:NP_502267]
88. F53A9.10 tnt-2 163.00 1908.27 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
89. Y43B11AR.4 rps-4 163.00 1908.27 40S ribosomal protein S4 [Source:UniProtKB/Swiss-Prot;Acc:Q9N3X2]
90. F28H1.2 cpn-3 162.00 1896.56 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
91. F54C9.5 rpl-5 162.00 1896.56 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
92. H06O01.1 pdi-3 162.00 1896.56
93. C17F4.7 C17F4.7 160.00 1873.14
94. F11G11.11 col-20 160.00 1873.14 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
95. K11H12.2 rpl-15 160.00 1873.14 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
96. C09H10.2 rpl-41 154.00 1802.90 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
97. F57B1.4 col-160 154.00 1802.90 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
98. W01A11.4 lec-10 154.00 1802.90 Galectin [Source:RefSeq peptide;Acc:NP_504647]
99. B0393.1 rps-0 152.00 1779.49 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
100. F09E5.15 prdx-2 152.00 1779.49 PeRoxireDoXin [Source:RefSeq peptide;Acc:NP_872052]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA