C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm4, section s11.

Sample reads: 35,072. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.4 act-3 565.00 16110.40 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. T04C12.6 act-1 487.00 13886.31 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. T20G5.7 dod-6 384.00 10949.37 Downstream Of DAF-16 (regulated by DAF-16) [Source:RefSeq peptide;Acc:NP_499257]
4. F09F7.2 mlc-3 362.00 10322.06 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
5. M03F4.2 act-4 342.00 9751.78 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
6. R06C7.10 myo-1 270.00 7698.77 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
7. K12G11.3 sodh-1 264.00 7527.69 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
8. C36E6.3 mlc-1 261.00 7442.15 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
9. T27E9.1 ant-1.1 248.00 7071.47 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
10. F11C3.3 unc-54 233.00 6643.76 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
11. Y82E9BR.3 Y82E9BR.3 233.00 6643.76 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
12. T18D3.4 myo-2 225.00 6415.64 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
13. Y105E8B.1 lev-11 225.00 6415.64 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
14. F07A5.7 unc-15 214.00 6101.99 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
15. T25F10.6 clik-1 202.00 5759.82 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
16. C14B9.1 hsp-12.2 194.00 5531.71 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
17. W03F8.1 tni-4 189.00 5389.14 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
18. T04C12.5 act-2 187.00 5332.11 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
19. F02A9.3 far-2 177.00 5046.97 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
20. F52H3.7 lec-2 173.00 4932.92 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
21. W06H8.8 ttn-1 171.00 4875.89 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
22. C34E10.6 atp-2 152.00 4334.12 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
23. F46H5.3 F46H5.3 151.00 4305.61 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
24. K08D12.6 K08D12.6 147.00 4191.55
25. C18A11.7 dim-1 142.00 4048.98 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
26. K10B3.9 mai-1 140.00 3991.96 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
27. F54C1.7 pat-10 138.00 3934.93 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
28. C53C9.2 C53C9.2 137.00 3906.41
29. F28H1.2 cpn-3 127.00 3621.28 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
30. F15A4.6 F15A4.6 115.00 3279.11
31. F52D10.3 ftt-2 114.00 3250.59 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
32. C49G7.3 C49G7.3 111.00 3165.05
33. ZC116.1 ZC116.1 109.00 3108.02
34. Y69A2AR.18 Y69A2AR.18 108.00 3079.51
35. ZC15.8 pqn-94 108.00 3079.51 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
36. T20G5.2 cts-1 105.00 2993.97 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
37. F49D11.8 cpn-4 103.00 2936.94 CalPoNin [Source:RefSeq peptide;Acc:NP_492849]
38. C14F5.3 tnt-3 100.00 2851.40 TropoNin T [Source:RefSeq peptide;Acc:NP_509337]
39. R10E11.8 vha-1 97.20 2771.56 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
40. C36E6.5 mlc-2 94.30 2688.87 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
41. F25H2.5 ndk-1 94.30 2688.87 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
42. R05G6.7 vdac-1 94.30 2688.87 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
43. F01G12.5 let-2 90.00 2566.26 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
44. F11H8.3 col-8 88.60 2526.34 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
45. E04A4.7 cyc-2.1 87.20 2486.42 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
46. F01G4.6 F01G4.6 87.20 2486.42 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
47. F56B6.4 gyg-1 85.80 2446.50 Glycogenin-1 [Source:UniProtKB/Swiss-Prot;Acc:H2KYQ5]
48. T22B11.4 T22B11.4 85.80 2446.50
49. C06A8.3 C06A8.3 84.40 2406.58
50. C44B12.2 ost-1 84.40 2406.58 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
51. F08B6.4 unc-87 84.40 2406.58 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
52. T23E7.4 nlp-6 84.40 2406.58 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_001257288]
53. F01D4.4 egl-21 83.00 2366.66
54. F20H11.3 mdh-2 83.00 2366.66 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
55. ZC21.3 ZC21.3 83.00 2366.66
56. F10C1.2 ifb-1 81.60 2326.74 Intermediate filament protein ifb-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19289]
57. F11E6.3 F11E6.3 81.60 2326.74
58. F13D12.4 alh-8 81.60 2326.74 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
59. F27C1.7 atp-3 81.60 2326.74 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
60. C45G9.6 C45G9.6 78.90 2249.75
61. T05B4.3 phat-4 78.90 2249.75 PHAryngeal gland Toxin-related [Source:RefSeq peptide;Acc:NP_504152]
62. T20G5.8 T20G5.8 77.50 2209.83
63. T22E5.5 mup-2 77.50 2209.83 Troponin T [Source:UniProtKB/Swiss-Prot;Acc:Q27371]
64. C51E3.7 egl-3 76.20 2172.77 Prohormone convertase 2; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECN9]
65. Y67H2A.5 Y67H2A.5 76.20 2172.77
66. F53A9.10 tnt-2 74.80 2132.85 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
67. ZK829.4 gdh-1 74.80 2132.85 Glutamate dehydrogenase [Source:RefSeq peptide;Acc:NP_502267]
68. T05A1.2 col-122 72.20 2058.71 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
69. F57B1.4 col-160 69.50 1981.72 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
70. T21B10.2 enol-1 69.50 1981.72 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
71. ZC101.2 unc-52 68.20 1944.65 Basement membrane proteoglycan [Source:UniProtKB/Swiss-Prot;Acc:Q06561]
72. F31E3.5 eef-1A.1 66.90 1907.59 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
73. M18.1 col-129 66.90 1907.59 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
74. T21H3.3 cmd-1 66.90 1907.59 Calmodulin [Source:UniProtKB/Swiss-Prot;Acc:O16305]
75. H28O16.1 H28O16.1 65.60 1870.52 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
76. RIT1P.866 63.10 1799.23
77. C05E11.8 flp-12 61.80 1762.16 FMRF-Like Peptide [Source:RefSeq peptide;Acc:NP_508789]
78. F23H12.8 fipr-1 61.80 1762.16 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_872151]
79. E03D2.1 nlp-13 60.50 1725.10 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504170]
80. F33A8.2 nlp-18 60.50 1725.10 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_496365]
81. T27C4.1 T27C4.1 60.50 1725.10
82. Y49A3A.3 Y49A3A.3 60.50 1725.10
83. F58G4.1 myo-5 59.30 1690.88 MYOsin heavy chain structural genes [Source:RefSeq peptide;Acc:NP_505094]
84. F33A8.3 cey-1 58.00 1653.81 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
85. W09C5.8 W09C5.8 56.80 1619.59
86. C09D1.1 unc-89 55.50 1582.53 Muscle M-line assembly protein unc-89 [Source:UniProtKB/Swiss-Prot;Acc:O01761]
87. C10G8.5 ncx-2 55.50 1582.53 Na/Ca eXchangers [Source:RefSeq peptide;Acc:NP_504414]
88. F26E4.6 F26E4.6 55.50 1582.53
89. RIT6P.424 55.50 1582.53
90. C17H12.14 vha-8 54.30 1548.31 Vacuolar H ATPase [Source:RefSeq peptide;Acc:NP_501040]
91. F26F12.1 col-140 54.30 1548.31 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
92. T05D4.1 aldo-1 54.30 1548.31 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
93. F11G11.11 col-20 53.00 1511.24 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
94. F49E2.5 F49E2.5 53.00 1511.24
95. F54E7.2 rps-12 53.00 1511.24 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
96. T23E7.2 T23E7.2 53.00 1511.24
97. ZK721.2 unc-27 53.00 1511.24 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
98. C24A3.2 C24A3.2 51.80 1477.02
99. D1007.6 rps-10 51.80 1477.02 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
100. K02F2.2 ahcy-1 51.80 1477.02 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA