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Experiment herm3, section s42.

Sample reads: 2,084. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. K08D12.6 K08D12.6 94.30 45241.27
2. M18.1 col-129 54.30 26050.91 COLlagen [Source:RefSeq peptide;Acc:NP_001293923]
3. F57B1.4 col-160 44.60 21397.25 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
4. RIT6P.22 39.90 19142.38
5. F11H8.3 col-8 30.70 14728.60 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
6. C06A8.3 C06A8.3 28.50 13673.13
7. F41F3.4 col-139 28.50 13673.13 COLlagen [Source:RefSeq peptide;Acc:NP_504252]
8. Y77E11A.15 col-106 28.50 13673.13 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
9. T05A1.2 col-122 27.40 13145.40 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
10. F11G11.11 col-20 25.20 12089.93 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
11. W03G11.1 col-181 21.90 10506.72 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
12. F15A2.1 col-184 20.80 9978.99 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
13. F52H3.7 lec-2 19.70 9451.25 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
14. C09G5.5 col-80 18.60 8923.52 Putative cuticle collagen 80 [Source:UniProtKB/Swiss-Prot;Acc:Q09456]
15. C34F6.2 col-178 18.60 8923.52 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
16. C49F5.1 sams-1 18.60 8923.52 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
17. F38A3.1 col-81 17.60 8443.76 COLlagen [Source:RefSeq peptide;Acc:NP_496361]
18. F11E6.3 F11E6.3 12.30 5901.04
19. C24F3.6 col-124 11.20 5373.30 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
20. F26F12.1 col-140 11.20 5373.30 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
21. F53F4.13 F53F4.13 11.20 5373.30
22. K07E1.1 K07E1.1 11.20 5373.30 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q09407]
23. F56B3.1 col-103 10.20 4893.54 COLlagen [Source:RefSeq peptide;Acc:NP_499982]
24. K02E11.7 K02E11.7 10.20 4893.54
25. W03G11.1b 10.20 4893.54
26. Y47D7A.7 Y47D7A.7 10.20 4893.54
27. C34E10.6 atp-2 9.14 4385.00 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
28. F20A1.1 F20A1.1 9.14 4385.00
29. F47B7.1 F47B7.1 9.14 4385.00 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
30. F57B1.3 col-159 9.14 4385.00 COLlagen [Source:RefSeq peptide;Acc:NP_506283]
31. K10B3.9 mai-1 9.14 4385.00 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
32. Y47D7A.6 Y47D7A.6 9.14 4385.00
33. ZK1193.1 col-19 9.14 4385.00 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
34. K02F2.2 ahcy-1 8.11 3890.85 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
35. T13B5.1 snf-3 8.11 3890.85 Sodium- and chloride-dependent betaine transporter [Source:UniProtKB/Swiss-Prot;Acc:G5EBN9]
36. ZK484.1 oaz-1 8.11 3890.85 Ornithine decarboxylase antizyme [Source:UniProtKB/Swiss-Prot;Acc:Q9NHZ6]
37. F25B4.9 clec-1 7.08 3396.69 C-type LECtin [Source:RefSeq peptide;Acc:NP_504500]
38. F49E2.5 F49E2.5 7.08 3396.69
39. F52D10.3 ftt-2 7.08 3396.69 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
40. F57G12.1 F57G12.1 7.08 3396.69
41. R10E11.8 vha-1 7.08 3396.69 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
42. W05B2.6 col-92 7.08 3396.69 COLlagen [Source:RefSeq peptide;Acc:NP_499408]
43. ZK1127.10 cth-2 7.08 3396.69 Putative cystathionine gamma-lyase 2 [Source:UniProtKB/Swiss-Prot;Acc:P55216]
44. B0334.1 ttr-18 6.06 2907.34 TransThyretin-Related family domain [Source:RefSeq peptide;Acc:NP_496453]
45. C06A8.1 mthf-1 6.06 2907.34 Probable methylenetetrahydrofolate reductase [Source:UniProtKB/Swiss-Prot;Acc:Q17693]
46. F17C11.3 col-153 6.06 2907.34 COLlagen [Source:RefSeq peptide;Acc:NP_505793]
47. F54E7.2 rps-12 6.06 2907.34 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
48. R07H5.8 R07H5.8 6.06 2907.34
49. W05B2.5 col-93 6.06 2907.34 COLlagen [Source:RefSeq peptide;Acc:NP_499409]
50. C09H10.2 rpl-41 5.04 2417.99 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
51. C44B11.3 mec-12 5.04 2417.99 Tubulin alpha-3 chain [Source:UniProtKB/Swiss-Prot;Acc:P91910]
52. F01D4.4 egl-21 5.04 2417.99
53. F13B10.2 rpl-3 5.04 2417.99 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
54. F22D6.15 F22D6.15 5.04 2417.99
55. H28O16.1 H28O16.1 5.04 2417.99 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
56. K08F8.4 pah-1 5.04 2417.99 Probable phenylalanine-4-hydroxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:P90925]
57. T04F3.1 T04F3.1 5.04 2417.99
58. T05F1.3 rps-19 5.04 2417.99 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
59. T27E9.1 ant-1.1 5.04 2417.99 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
60. W05B2.1 col-94 5.04 2417.99 COLlagen [Source:RefSeq peptide;Acc:NP_499410]
61. W06H8.6 W06H8.6 5.04 2417.99
62. Y24D9A.1 ell-1 5.04 2417.99 ELL transcription elongation factor homolog [Source:RefSeq peptide;Acc:NP_741374]
63. Y24D9A.4 rpl-7A 5.04 2417.99 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
64. Y48B6A.14 hmg-1.1 5.04 2417.99 HMG [Source:RefSeq peptide;Acc:NP_496970]
65. ZC8.4 lfi-1 5.04 2417.99 Lin-5 (Five) Interacting protein [Source:RefSeq peptide;Acc:NP_508848]
66. AC3.5 AC3.5 4.02 1928.63 Aminopeptidase-like protein AC3.5 [Source:UniProtKB/Swiss-Prot;Acc:Q17405]
67. B0350.2 unc-44 4.02 1928.63 AO66 ankyrin; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5ECZ1]
68. C32D5.9 lgg-1 4.02 1928.63
69. F02A9.2 far-1 4.02 1928.63 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
70. F14F7.1 col-98 4.02 1928.63 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
71. F17C11.9 eef-1G 4.02 1928.63 Probable elongation factor 1-gamma [Source:UniProtKB/Swiss-Prot;Acc:P54412]
72. F18H3.3 pab-2 4.02 1928.63 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_510259]
73. F32H2.5 fasn-1 4.02 1928.63 Fatty Acid SyNthase [Source:RefSeq peptide;Acc:NP_492417]
74. F33A8.3 cey-1 4.02 1928.63 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
75. F37C4.6 F37C4.6 4.02 1928.63
76. F42D1.2 tatn-1 4.02 1928.63 Tyrosine AminoTraNsferase [Source:RefSeq peptide;Acc:NP_510454]
77. F45D3.3 F45D3.3 4.02 1928.63
78. F45D3.4 F45D3.4 4.02 1928.63
79. F56E10.4 rps-27 4.02 1928.63 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
80. F56H9.2 F56H9.2 4.02 1928.63
81. R02F2.1 R02F2.1 4.02 1928.63
82. RIT1P.688 4.02 1928.63
83. T04C12.6 act-1 4.02 1928.63 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
84. T24F1.5 T24F1.5 4.02 1928.63
85. Y71A12B.1 rps-6 4.02 1928.63 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
86. Y71F9AL.13 rpl-1 4.02 1928.63 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
87. Y79H2A.1 brp-1 4.02 1928.63 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
88. ZC410.5 ZC410.5 4.02 1928.63
89. ZK154.3 mec-7 4.02 1928.63 Tubulin beta-1 chain [Source:UniProtKB/Swiss-Prot;Acc:P12456]
90. ZK973.6 anc-1 4.02 1928.63 Nuclear anchorage protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4M4]
91. B0213.2 nlp-27 3.01 1444.07 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_504111]
92. C03C10.1 kin-19 3.01 1444.07 Casein kinase I isoform alpha [Source:UniProtKB/Swiss-Prot;Acc:P42168]
93. C04F12.4 rpl-14 3.01 1444.07 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
94. C23G10.2 C23G10.2 3.01 1444.07 RutC family protein C23G10.2 [Source:UniProtKB/Swiss-Prot;Acc:Q10121]
95. C23H3.2 C23H3.2 3.01 1444.07
96. C23H4.1 cab-1 3.01 1444.07
97. C24H10.5 cal-5 3.01 1444.07 CALmodulin related genes [Source:RefSeq peptide;Acc:NP_508864]
98. C43E11.3 met-1 3.01 1444.07 Histone-lysine N-methyltransferase [Source:RefSeq peptide;Acc:NP_491340]
99. C48E7.1 C48E7.1 3.01 1444.07
100. D2005.2 nlp-8 3.01 1444.07 Neuropeptide-Like Protein [Source:RefSeq peptide;Acc:NP_492158]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA