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Experiment herm2, section s39.

Sample reads: 228,583. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F43D9.4 sip-1 782.00 3421.13 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
2. B0280.5 cpg-2 708.00 3097.39 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
3. F31E3.5 eef-1A.1 664.00 2904.90 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
4. F54E7.2 rps-12 664.00 2904.90 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
5. T06E6.2 cyb-3 651.00 2848.02 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
6. ZC404.8 spn-4 639.00 2795.53 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
7. Y18D10A.17 car-1 616.00 2694.90 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
8. F42C5.8 rps-8 565.00 2471.79 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
9. F52E1.1 pos-1 565.00 2471.79 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
10. ZC513.6 oma-2 556.00 2432.41
11. C04F12.4 rpl-14 531.00 2323.04 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
12. F25H2.5 ndk-1 531.00 2323.04 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
13. H02I12.1 cbd-1 531.00 2323.04 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
14. E04A4.7 cyc-2.1 516.00 2257.42 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
15. F53G12.5 mex-3 516.00 2257.42 Muscle EXcess [Source:RefSeq peptide;Acc:NP_001293263]
16. RIT1P.688 516.00 2257.42
17. Y24D9A.4 rpl-7A 516.00 2257.42 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
18. F56E10.4 rps-27 494.00 2161.17 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
19. T27E9.1 ant-1.1 494.00 2161.17 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
20. F36A2.6 rps-15 487.00 2130.55 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
21. Y48B6A.14 hmg-1.1 481.00 2104.30 HMG [Source:RefSeq peptide;Acc:NP_496970]
22. B0041.4 rpl-4 468.00 2047.43 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
23. F13B10.2 rpl-3 468.00 2047.43 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
24. C49H3.11 rps-2 462.00 2021.18 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
25. ZC434.2 rps-7 456.00 1994.93 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
26. R13A5.8 rpl-9 450.00 1968.68 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
27. W02A2.7 mex-5 450.00 1968.68 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
28. Y71F9AL.13 rpl-1 450.00 1968.68 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
29. R05G6.7 vdac-1 444.00 1942.43 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
30. F46F11.2 cey-2 439.00 1920.56 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
31. F40F11.1 rps-11 433.00 1894.31 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
32. F59D8.2 vit-4 428.00 1872.43 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
33. W09C5.6 rpl-31 417.00 1824.31 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
34. Y105E8A.16 rps-20 407.00 1780.56 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
35. C42C1.14 rpl-34 402.00 1758.69 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
36. F52B5.6 rpl-25.2 398.00 1741.19 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
37. W05F2.3 W05F2.3 393.00 1719.31
38. C07G2.1 cpg-1 375.00 1640.57 Chondroitin proteoglycan 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17802]
39. F39B2.6 rps-26 375.00 1640.57 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
40. Y82E9BR.3 Y82E9BR.3 375.00 1640.57 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
41. C14B9.7 rpl-21 371.00 1623.07 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
42. D1007.6 rps-10 371.00 1623.07 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
43. C06A1.1 cdc-48.1 358.00 1566.19 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
44. C25A1.8 clec-87 358.00 1566.19 C-type lectin domain-containing protein 87 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVS3]
45. F54C9.8 puf-5 358.00 1566.19 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
46. T04C12.6 act-1 358.00 1566.19 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
47. C07H6.5 cgh-1 354.00 1548.70 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
48. K08D12.3 K08D12.3 354.00 1548.70
49. Y106G6H.2 pab-1 354.00 1548.70 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
50. C56C10.8 icd-1 350.00 1531.20 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
51. K02F2.2 ahcy-1 342.00 1496.20 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
52. M7.1 let-70 342.00 1496.20 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
53. Y57G11C.15 sec-61 342.00 1496.20 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
54. Y75B12B.2 cyn-7 342.00 1496.20 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
55. F10B5.1 rpl-10 339.00 1483.07 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
56. F37C12.4 rpl-36 331.00 1448.07 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
57. Y45F10A.2 puf-3 331.00 1448.07 PUF (Pumilio/FBF) domain-containing [Source:RefSeq peptide;Acc:NP_502606]
58. R08C7.3 htz-1 328.00 1434.95 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
59. K11H12.2 rpl-15 324.00 1417.45 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
60. Y69A2AR.18 Y69A2AR.18 324.00 1417.45
61. C28D4.3 gln-6 321.00 1404.33 GLutamiNe synthetase (glutamate-ammonia ligase) [Source:RefSeq peptide;Acc:NP_501733]
62. T04C12.4 act-3 317.00 1386.83 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
63. T07A9.14 T07A9.14 314.00 1373.70
64. T22F3.3 T22F3.3 314.00 1373.70 Alpha-1,4 glucan phosphorylase [Source:RefSeq peptide;Acc:NP_504007]
65. ZC168.4 cyb-1 314.00 1373.70 G2/mitotic-specific cyclin-B1 [Source:UniProtKB/Swiss-Prot;Acc:Q10653]
66. Y71A12B.1 rps-6 310.00 1356.20 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
67. B0244.8 egg-1 307.00 1343.08 EGG sterile (unfertilizable) [Source:RefSeq peptide;Acc:NP_498237]
68. B0250.1 rpl-2 307.00 1343.08 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
69. C08H9.2 vgln-1 307.00 1343.08 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
70. R09B3.3 R09B3.3 307.00 1343.08
71. Y111B2A.18 rsp-3 307.00 1343.08 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
72. F28C6.7 rpl-26 300.00 1312.45 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
73. T19H12.2 T19H12.2 297.00 1299.33 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O01615]
74. Y48B6A.2 rpl-43 297.00 1299.33 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
75. Y56A3A.21 trap-4 297.00 1299.33 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
76. Y65B4BL.5 acs-13 294.00 1286.20 fatty Acid CoA Synthetase family [Source:RefSeq peptide;Acc:NP_001293195]
77. F49E11.1 mbk-2 291.00 1273.08 Dual specificity tyrosine-phosphorylation-regulated kinase mbk-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XTF3]
78. M01F1.2 rpl-16 291.00 1273.08 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
79. T22F3.4 rpl-11.1 288.00 1259.96 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
80. W06A7.3 ret-1 288.00 1259.96 Reticulon-like protein [Source:RefSeq peptide;Acc:NP_506656]
81. ZC395.10 ZC395.10 288.00 1259.96 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
82. F26D10.3 hsp-1 285.00 1246.83 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
83. C05C10.5 C05C10.5 279.00 1220.58
84. R10E11.8 vha-1 279.00 1220.58 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
85. F57B9.5 byn-1 276.00 1207.46 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
86. Y45F10D.12 rpl-18 276.00 1207.46 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
87. W01D2.1 W01D2.1 273.00 1194.33 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
88. ZK1010.1 ubq-2 273.00 1194.33 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
89. B0513.3 rpl-29 270.00 1181.21 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
90. C09H10.2 rpl-41 270.00 1181.21 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
91. F59D8.1 vit-3 270.00 1181.21 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
92. T04C12.5 act-2 270.00 1181.21 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
93. T05F1.3 rps-19 270.00 1181.21 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
94. W08E12.7 W08E12.7 270.00 1181.21
95. AH6.5 mex-6 267.00 1168.08 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
96. F14B4.2 hxk-1 267.00 1168.08 Hexokinase [Source:RefSeq peptide;Acc:NP_001021107]
97. F28D1.7 rps-23 267.00 1168.08 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
98. F02A9.3 far-2 264.00 1154.96 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
99. R02F2.1 R02F2.1 264.00 1154.96
100. T01C3.6 rps-16 264.00 1154.96 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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