C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment herm2, section s31.

Sample reads: 257,403. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 1010.00 3923.82 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. Y71H9A.3 sto-4 920.00 3574.17 Stomatin-4 [Source:UniProtKB/Swiss-Prot;Acc:Q22165]
3. RIT1P.688 885.00 3438.20
4. C04F12.4 rpl-14 855.00 3321.65 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
5. F56E10.4 rps-27 855.00 3321.65 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
6. R05G6.7 vdac-1 855.00 3321.65 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
7. E04A4.7 cyc-2.1 828.00 3216.76 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
8. F36A2.6 rps-15 804.00 3123.52 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
9. F39B2.6 rps-26 804.00 3123.52 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
10. Y18D10A.17 car-1 804.00 3123.52 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
11. B0041.4 rpl-4 782.00 3038.05 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
12. F31E3.5 eef-1A.1 782.00 3038.05 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
13. W09C5.6 rpl-31 782.00 3038.05 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
14. C33C12.10 C33C12.10 743.00 2886.53
15. Y105E8A.16 rps-20 743.00 2886.53 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
16. Y24D9A.4 rpl-7A 743.00 2886.53 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
17. F26D10.3 hsp-1 708.00 2750.56 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
18. Y106G6H.2 pab-1 708.00 2750.56 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
19. Y69A2AR.18 Y69A2AR.18 708.00 2750.56
20. ZC434.2 rps-7 693.00 2692.29 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
21. C49H3.11 rps-2 678.00 2634.01 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
22. F42C5.8 rps-8 678.00 2634.01 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
23. F13B10.2 rpl-3 664.00 2579.62 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
24. Y75B12B.2 cyn-7 664.00 2579.62 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
25. C14B9.7 rpl-21 639.00 2482.50 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
26. C42C1.14 rpl-34 639.00 2482.50 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
27. T04C12.6 act-1 639.00 2482.50 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
28. T27E9.1 ant-1.1 639.00 2482.50 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
29. F11C3.3 unc-54 627.00 2435.88 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
30. F40F11.1 rps-11 627.00 2435.88 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
31. F52B5.6 rpl-25.2 627.00 2435.88 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
32. R13A5.8 rpl-9 616.00 2393.14 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
33. Y46E12BL.4 spsb-1 594.00 2307.67 SPSB (SPry and Socs Box) family [Source:RefSeq peptide;Acc:NP_497321]
34. K11H12.2 rpl-15 575.00 2233.86 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
35. F07A5.7 unc-15 565.00 2195.01 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
36. Y57G11C.15 sec-61 548.00 2128.96 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
37. Y71F9AL.13 rpl-1 548.00 2128.96 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
38. K08D12.3 K08D12.3 539.00 2094.00
39. C56C10.8 icd-1 531.00 2062.92 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
40. K07H8.10 K07H8.10 531.00 2062.92
41. Y71A12B.1 rps-6 531.00 2062.92 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
42. K02B2.5 rps-25 523.00 2031.84 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
43. Y82E9BR.3 Y82E9BR.3 523.00 2031.84 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
44. F28C6.7 rpl-26 516.00 2004.65 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
45. F02A9.3 far-2 508.00 1973.57 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
46. F37C12.4 rpl-36 508.00 1973.57 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
47. F59D8.2 vit-4 508.00 1973.57 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
48. D1007.6 rps-10 501.00 1946.37 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
49. F25H2.5 ndk-1 501.00 1946.37 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
50. C34E10.6 atp-2 494.00 1919.18 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
51. T04C12.4 act-3 494.00 1919.18 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
52. K02F2.2 ahcy-1 481.00 1868.67 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
53. M01F1.2 rpl-16 481.00 1868.67 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
54. T07A9.14 T07A9.14 474.00 1841.48
55. F56D12.5 vig-1 468.00 1818.17 VIG (Drosophila Vasa Intronic Gene) ortholog [Source:RefSeq peptide;Acc:NP_740971]
56. Y48B6A.14 hmg-1.1 468.00 1818.17 HMG [Source:RefSeq peptide;Acc:NP_496970]
57. B0513.3 rpl-29 462.00 1794.86 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
58. F01G12.5 let-2 462.00 1794.86 Collagen alpha-2(IV) chain [Source:UniProtKB/Swiss-Prot;Acc:P17140]
59. F10B5.1 rpl-10 462.00 1794.86 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
60. F59D8.1 vit-3 462.00 1794.86 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
61. T22C1.10 rbg-2 462.00 1794.86 Rab3 GTPase-activating protein regulatory subunit [Source:UniProtKB/Swiss-Prot;Acc:Q22670]
62. Y113G7B.17 prmt-1 462.00 1794.86 PRotein arginine MethylTransferase [Source:RefSeq peptide;Acc:NP_507909]
63. Y45F10D.12 rpl-18 456.00 1771.55 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
64. Y66H1B.3 450.00 1748.24
65. T01C3.6 rps-16 439.00 1705.50 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
66. C07H6.5 cgh-1 433.00 1682.19 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
67. C37C3.6 mig-6 428.00 1662.77 Papilin [Source:UniProtKB/Swiss-Prot;Acc:O76840]
68. F16H11.2 428.00 1662.77
69. C06B8.8 rpl-38 417.00 1620.03 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
70. F28H1.2 cpn-3 417.00 1620.03 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
71. F32E10.4 ima-3 417.00 1620.03 Importin subunit alpha-3 [Source:UniProtKB/Swiss-Prot;Acc:Q19969]
72. H02I12.1 cbd-1 417.00 1620.03 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
73. M03F4.2 act-4 417.00 1620.03 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
74. T22F3.4 rpl-11.1 412.00 1600.61 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
75. ZC395.10 ZC395.10 412.00 1600.61 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
76. D2096.8 nap-1 402.00 1561.76 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
77. F10E7.2 F10E7.2 398.00 1546.22
78. Y56A3A.21 trap-4 398.00 1546.22 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
79. Y71F9AR.2 Y71F9AR.2 398.00 1546.22
80. F37C12.9 rps-14 393.00 1526.79 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
81. R10D12.13 R10D12.13 393.00 1526.79
82. W08E12.7 W08E12.7 393.00 1526.79
83. R09B3.3 R09B3.3 388.00 1507.37
84. ZC513.6 oma-2 384.00 1491.83
85. F28D1.7 rps-23 379.00 1472.40 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
86. F54C9.5 rpl-5 379.00 1472.40 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
87. W01D2.1 W01D2.1 379.00 1472.40 Ribosomal protein L37 [Source:RefSeq peptide;Acc:NP_497072]
88. B0250.1 rpl-2 375.00 1456.86 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
89. C06A1.1 cdc-48.1 371.00 1441.32 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
90. R151.3 rpl-6 371.00 1441.32 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
91. T06E6.2 cyb-3 371.00 1441.32 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
92. C16A3.9 rps-13 366.00 1421.90 40S ribosomal protein S13 [Source:UniProtKB/Swiss-Prot;Acc:P51404]
93. F20H11.3 mdh-2 366.00 1421.90 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
94. T05F1.3 rps-19 366.00 1421.90 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
95. ZK1010.1 ubq-2 366.00 1421.90 Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632]
96. F53A3.3 rps-22 358.00 1390.82 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
97. T23G11.3 gld-1 358.00 1390.82 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
98. Y48B6A.2 rpl-43 354.00 1375.28 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
99. ZK652.4 rpl-35 354.00 1375.28 60S ribosomal protein L35 [Source:UniProtKB/Swiss-Prot;Acc:P34662]
100. B0393.1 rps-0 346.00 1344.20 40S ribosomal protein SA [Source:UniProtKB/Swiss-Prot;Acc:P46769]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA