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Experiment herm1, section s1.

Sample reads: 127. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. C36E6.3 mlc-1 2.00 15748.03 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
2. C49F5.1 sams-1 2.00 15748.03 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
3. D1007.6 rps-10 2.00 15748.03 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
4. F52H3.7 lec-2 2.00 15748.03 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
5. F54E7.2 rps-12 2.00 15748.03 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
6. F59D8.1 vit-3 2.00 15748.03 Vitellogenin-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9N4J2]
7. R05G6.7 vdac-1 2.00 15748.03 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
8. T27E9.1 ant-1.1 2.00 15748.03 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
9. Y24D9A.4 rpl-7A 2.00 15748.03 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
10. Y87G2A.5 vars-2 2.00 15748.03 Valine--tRNA ligase [Source:UniProtKB/Swiss-Prot;Acc:Q9U1Q4]
11. AH6.5 mex-6 1.00 7874.02 Zinc finger protein mex-6 [Source:UniProtKB/Swiss-Prot;Acc:Q09436]
12. B0495.7 B0495.7 1.00 7874.02 Putative endoplasmic reticulum metallopeptidase 1-A [Source:UniProtKB/Swiss-Prot;Acc:Q09216]
13. B0513.1 lin-66 1.00 7874.02
14. B0513.3 rpl-29 1.00 7874.02 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
15. C04B4.2 C04B4.2 1.00 7874.02
16. C06B8.8 rpl-38 1.00 7874.02 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
17. C07A9.3 tlk-1 1.00 7874.02 Serine/threonine-protein kinase tousled-like 1 [Source:UniProtKB/Swiss-Prot;Acc:P34314]
18. C07G1.3 pct-1 1.00 7874.02 Cyclin-dependent kinase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q8I7M8]
19. C09H6.3 mau-2 1.00 7874.02 Maternal uncoordinated protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O17581]
20. C14C10.5 C14C10.5 1.00 7874.02
21. C15F1.1 C15F1.1 1.00 7874.02
22. C18A3.3 C18A3.3 1.00 7874.02 Probable rRNA-processing protein EBP2 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q09958]
23. C37A2.7 C37A2.7 1.00 7874.02 60S acidic ribosomal protein P2 [Source:UniProtKB/Swiss-Prot;Acc:O01504]
24. C37H5.5 C37H5.5 1.00 7874.02 Nucleolar complex protein 3 homolog [Source:UniProtKB/Swiss-Prot;Acc:P91136]
25. C47E12.5 uba-1 1.00 7874.02 UBA (human ubiquitin) related [Source:RefSeq peptide;Acc:NP_001033405]
26. C48G7.3 rin-1 1.00 7874.02 RIN (Ras/Rab INteractor) homolog [Source:RefSeq peptide;Acc:NP_001263893]
27. C50C3.6 prp-8 1.00 7874.02 Pre-mRNA-splicing factor 8 homolog [Source:UniProtKB/Swiss-Prot;Acc:P34369]
28. C53A5.3 hda-1 1.00 7874.02 Histone deacetylase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17695]
29. D2013.7 eif-3.F 1.00 7874.02 Eukaryotic translation initiation factor 3 subunit F [Source:UniProtKB/Swiss-Prot;Acc:Q18967]
30. D2096.8 nap-1 1.00 7874.02 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
31. F01F1.2 F01F1.2 1.00 7874.02
32. F07A5.7 unc-15 1.00 7874.02 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
33. F08F8.3 kap-1 1.00 7874.02 Kinesin-Associated Protein [Source:RefSeq peptide;Acc:NP_001021246]
34. F09G2.9 attf-2 1.00 7874.02 AT hook Transcription Factor family [Source:RefSeq peptide;Acc:NP_504825]
35. F10B5.1 rpl-10 1.00 7874.02 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
36. F10E7.2 F10E7.2 1.00 7874.02
37. F11C3.3 unc-54 1.00 7874.02 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
38. F13E9.1 F13E9.1 1.00 7874.02
39. F14H3.6 F14H3.6 1.00 7874.02
40. F20D12.1 csr-1 1.00 7874.02 Chromosome-Segregation and RNAi deficient [Source:RefSeq peptide;Acc:NP_001040938]
41. F22D6.3 nars-1 1.00 7874.02 Asparagine--tRNA ligase, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q19722]
42. F25H2.5 ndk-1 1.00 7874.02 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
43. F27D4.4 F27D4.4 1.00 7874.02 Zinc finger CCCH domain-containing protein 15 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q93618]
44. F29B9.5 F29B9.5 1.00 7874.02
45. F29C4.2 F29C4.2 1.00 7874.02
46. F31C3.4 F31C3.4 1.00 7874.02
47. F32A5.4 F32A5.4 1.00 7874.02
48. F32B6.8 tbc-3 1.00 7874.02 TBC (Tre-2/Bub2/Cdc16) domain family [Source:RefSeq peptide;Acc:NP_001023165]
49. F35B3.5 ptrn-1 1.00 7874.02 PaTRoNin (microtubule-binding protein) homolog [Source:RefSeq peptide;Acc:NP_510751]
50. F35H8.3 zfp-2 1.00 7874.02 Zinc Finger Protein [Source:RefSeq peptide;Acc:NP_496055]
51. F36H9.3 dhs-13 1.00 7874.02 DeHydrogenases, Short chain [Source:RefSeq peptide;Acc:NP_503501]
52. F39H11.2 tlf-1 1.00 7874.02 TBP-Like Factor [Source:RefSeq peptide;Acc:NP_492356]
53. F40F8.10 rps-9 1.00 7874.02 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
54. F40F9.1 xbx-6 1.00 7874.02 X-BoX promoter element regulated [Source:RefSeq peptide;Acc:NP_741597]
55. F42A10.5 F42A10.5 1.00 7874.02
56. F42C5.8 rps-8 1.00 7874.02 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
57. F44E5.1 F44E5.1 1.00 7874.02
58. F46B6.7 ztf-7 1.00 7874.02 Zinc finger putative Transcription Factor family [Source:RefSeq peptide;Acc:NP_505526]
59. F52B5.1 abts-1 1.00 7874.02 Anion exchange protein [Source:RefSeq peptide;Acc:NP_492258]
60. F52D2.6 F52D2.6 1.00 7874.02
61. F52E1.14 F52E1.14 1.00 7874.02
62. F53F10.4 unc-108 1.00 7874.02 Rab-2 [Source:UniProtKB/TrEMBL;Acc:I7FN62]
63. F54C9.1 iff-2 1.00 7874.02 Eukaryotic translation initiation factor 5A-2 [Source:UniProtKB/Swiss-Prot;Acc:Q20751]
64. F54F2.2 zfp-1 1.00 7874.02 Uncharacterized protein F54F2.2, isoform a [Source:UniProtKB/Swiss-Prot;Acc:P34447]
65. F56F11.4 F56F11.4 1.00 7874.02
66. F58G1.1 wago-4 1.00 7874.02 Piwi-like protein [Source:RefSeq peptide;Acc:NP_496751]
67. F58G11.6 ccz-1 1.00 7874.02
68. F59F4.2 F59F4.2 1.00 7874.02
69. H06H21.3 eif-1.A 1.00 7874.02 Eukaryotic Initiation Factor [Source:RefSeq peptide;Acc:NP_500650]
70. K02B2.5 rps-25 1.00 7874.02 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
71. K04C2.3 K04C2.3 1.00 7874.02
72. K08F4.2 gtbp-1 1.00 7874.02 ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein [Source:RefSeq peptide;Acc:NP_501842]
73. K08F8.1 mak-1 1.00 7874.02 MAP kinase Activated protein Kinase [Source:RefSeq peptide;Acc:NP_001022239]
74. K10B2.1 lin-23 1.00 7874.02 F-box/WD repeat-containing protein lin-23 [Source:UniProtKB/Swiss-Prot;Acc:Q09990]
75. M01E11.4 pqn-52 1.00 7874.02 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_491629]
76. M01E5.5 top-1 1.00 7874.02 DNA topoisomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17966]
77. M01F1.2 rpl-16 1.00 7874.02 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
78. M03C11.5 ymel-1 1.00 7874.02 ATP-dependent zinc metalloprotease YME1 homolog [Source:UniProtKB/Swiss-Prot;Acc:P54813]
79. R05D3.7 unc-116 1.00 7874.02 Kinesin heavy chain [Source:UniProtKB/Swiss-Prot;Acc:P34540]
80. R07E5.13 R07E5.13 1.00 7874.02 Probable mitochondrial pyruvate carrier 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21828]
81. R144.7 larp-1 1.00 7874.02 La-related protein 1 [Source:UniProtKB/Swiss-Prot;Acc:D5MCN2]
82. T04C12.4 act-3 1.00 7874.02 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
83. T05E8.3 let-355 1.00 7874.02
84. T18H9.7 tag-232 1.00 7874.02
85. T25B9.9 T25B9.9 1.00 7874.02 6-phosphogluconate dehydrogenase, decarboxylating [Source:UniProtKB/Swiss-Prot;Acc:Q17761]
86. T26A5.9 dlc-1 1.00 7874.02 Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799]
87. T27C10.7 nspd-10 1.00 7874.02 Nematode Specific Peptide family, group D [Source:RefSeq peptide;Acc:NP_871892]
88. T27E9.7 abcf-2 1.00 7874.02 ABC transporter, class F [Source:RefSeq peptide;Acc:NP_499779]
89. T28B11.1 T28B11.1 1.00 7874.02
90. W02B9.1 hmr-1 1.00 7874.02 Cadherin-related hmr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q967F4]
91. W03G11.1b 1.00 7874.02
92. W06H8.8 ttn-1 1.00 7874.02 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
93. W08F4.3 W08F4.3 1.00 7874.02
94. Y10G11A.1 Y10G11A.1 1.00 7874.02 5'-nucleotidase [Source:RefSeq peptide;Acc:NP_001255892]
95. Y111B2A.18 rsp-3 1.00 7874.02 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
96. Y18D10A.17 car-1 1.00 7874.02 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
97. Y37D8A.14 cco-2 1.00 7874.02 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
98. Y39B6A.11 dyf-17 1.00 7874.02
99. Y39B6A.20 asp-1 1.00 7874.02 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
100. Y45G12B.1 nuo-5 1.00 7874.02 NADH Ubiquinone Oxidoreductase [Source:RefSeq peptide;Acc:NP_503733]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA