C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male4, region R8.

Sample reads: 247,132. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T04C12.6 act-1 2096.60 8483.73 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
2. T04C12.4 act-3 1689.63 6836.95 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
3. T27E9.1 ant-1.1 1383.86 5599.66 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
4. F11G11.11 col-20 1364.49 5521.28 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
5. F21F8.7 asp-6 1308.08 5293.03 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
6. F11C3.3 unc-54 1227.22 4965.83 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
7. C24F3.6 col-124 1166.21 4718.95 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
8. C53B4.5 col-119 1150.23 4654.30 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
9. F54C1.7 pat-10 1147.81 4644.50 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
10. ZK1193.1 col-19 1103.02 4463.27 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
11. F02A9.3 far-2 1040.31 4209.54 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
12. C34F6.2 col-178 1032.81 4179.17 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
13. F26F12.1 col-140 1031.60 4174.27 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
14. C34F6.3 col-179 1015.62 4109.61 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
15. Y39B6A.20 asp-1 1004.48 4064.55 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_741677]
16. Y38A10A.5 crt-1 995.04 4026.34 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
17. M03F4.2 act-4 983.66 3980.30 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
18. F25E5.7 F25E5.7 977.61 3955.81
19. Y105E8B.1 lev-11 949.77 3843.15 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
20. F34D6.7 F34D6.7 920.47 3724.61
21. F09F7.2 mlc-3 918.05 3714.82 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
22. Y82E9BR.3 Y82E9BR.3 915.87 3706.00 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
23. R03H10.5 R03H10.5 833.56 3372.92
24. F54D12.9 F54D12.9 830.17 3359.21
25. T04C12.5 act-2 827.02 3346.47 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
26. F21F8.3 asp-5 811.53 3283.77 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_505135]
27. RIT1P.688 807.41 3267.12
28. F20G2.4 nas-24 780.05 3156.42 Zinc metalloproteinase nas-24 [Source:UniProtKB/Swiss-Prot;Acc:Q93542]
29. K08D12.6 K08D12.6 761.68 3082.06
30. F07A5.7 unc-15 739.38 2991.84 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
31. Y39B6A.1 Y39B6A.1 738.51 2988.31
32. F34D6.9 F34D6.9 732.38 2963.53
33. F26D2.16 F26D2.16 723.64 2928.16
34. C05B5.11 C05B5.11 719.38 2910.92
35. E04A4.7 cyc-2.1 712.02 2881.14 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
36. C36E6.3 mlc-1 702.34 2841.95 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
37. T26A8.3 T26A8.3 698.46 2826.28
38. F34D6.8 F34D6.8 698.22 2825.30
39. T25F10.6 clik-1 676.68 2738.11 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
40. F02A9.2 far-1 657.31 2659.74 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
41. K02F2.2 ahcy-1 656.82 2657.78 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
42. T05A1.2 col-122 655.37 2651.90 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
43. F31E3.5 eef-1A.1 645.93 2613.70 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
44. M176.10 M176.10 622.44 2518.67
45. F25A2.1 F25A2.1 617.84 2500.06
46. F11H8.3 col-8 608.64 2462.83 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
47. F57F5.1 F57F5.1 590.92 2391.12
48. C35E7.7 C35E7.7 590.27 2388.47
49. K10B3.9 mai-1 588.07 2379.56 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
50. F44C4.3 cpr-4 572.43 2316.27 Cathepsin B-like cysteine proteinase 4 [Source:UniProtKB/Swiss-Prot;Acc:P43508]
51. K09F5.3 spp-14 559.50 2263.96 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_001041271]
52. T28D6.2 tba-7 557.80 2257.10 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_499463]
53. ZK721.2 unc-27 554.17 2242.41 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
54. F43C11.2 F43C11.2 539.16 2181.67
55. H06O01.1 pdi-3 518.58 2098.40
56. Y25C1A.2 Y25C1A.2 514.47 2081.75
57. F35C5.6 clec-63 509.09 2060.00 C-type LECtin [Source:RefSeq peptide;Acc:NP_496743]
58. F08B6.4 unc-87 506.24 2048.44 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
59. F54E7.2 rps-12 499.94 2022.97 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
60. C15H9.6 hsp-3 498.73 2018.07 Heat shock 70 kDa protein C [Source:UniProtKB/Swiss-Prot;Acc:P27420]
61. R05G6.7 vdac-1 498.73 2018.07 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
62. F28H1.2 cpn-3 483.24 1955.37 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
63. W03G11.1 col-181 479.85 1941.66 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
64. Y18D10A.2 Y18D10A.2 470.65 1904.43
65. F46H5.3 F46H5.3 468.23 1894.64 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
66. R10E11.8 vha-1 466.05 1885.82 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
67. K10C2.4 fah-1 461.79 1868.58 FumarylAcetoacetate Hydrolase [Source:RefSeq peptide;Acc:NP_509083]
68. F40F11.1 rps-11 457.57 1851.53 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
69. F56E10.4 rps-27 454.91 1840.75 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
70. F57B1.4 col-160 446.68 1807.45 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
71. Y51H4A.10 fip-7 445.56 1802.94 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_502967]
72. F42C5.8 rps-8 442.80 1791.77 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
73. C34E10.6 atp-2 439.66 1779.04 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
74. F25E5.10 try-8 439.03 1776.49 TRYpsin-like protease [Source:RefSeq peptide;Acc:NP_504916]
75. C04F12.4 rpl-14 437.72 1771.20 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
76. Y77E11A.15 col-106 435.30 1761.40 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
77. C36E6.5 mlc-2 429.49 1737.89 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
78. F25H2.5 ndk-1 424.65 1718.30 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
79. Y105E8A.16 rps-20 423.92 1715.36 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
80. C17F4.7 C17F4.7 421.40 1705.17
81. C42C1.14 rpl-34 418.11 1691.85 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
82. ZC434.2 rps-7 414.48 1677.15 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
83. F39B2.6 rps-26 413.61 1673.63 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
84. C06B8.8 rpl-38 407.22 1647.76 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
85. F13B10.2 rpl-3 401.89 1626.21 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
86. Y51H4A.32 fipr-27 401.89 1626.21 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001076736]
87. RIT2P.801 396.08 1602.70
88. T08A9.9 spp-5 394.14 1594.86 SaPosin-like Protein family [Source:RefSeq peptide;Acc:NP_509238]
89. F43C11.12 F43C11.12 392.59 1588.59
90. T18H9.2 asp-2 391.09 1582.52 ASpartyl Protease [Source:RefSeq peptide;Acc:NP_505384]
91. F09E10.1 F09E10.1 390.53 1580.27
92. Y71F9AL.13 rpl-1 389.08 1574.39 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
93. K02B2.5 rps-25 383.97 1553.72 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
94. B0513.3 rpl-29 382.76 1548.82 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
95. C06E2.9 C06E2.9 382.30 1546.96
96. B0041.4 rpl-4 382.28 1546.86 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
97. H28O16.1 H28O16.1 379.62 1536.08 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
98. Y69A2AR.18 Y69A2AR.18 378.16 1530.21
99. C16C8.9 C16C8.9 375.11 1517.86
100. F53A9.10 tnt-2 373.81 1512.57 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA