C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male1, region R9.

Sample reads: 124,266. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. C05B5.11 C05B5.11 1203.01 9681.65
2. T10D4.4 ins-31 1201.65 9670.71 INSulin related [Source:RefSeq peptide;Acc:NP_494454]
3. K12H6.9 K12H6.9 1190.77 9583.17
4. T10D4.15 T10D4.15 908.32 7310.02
5. C14F11.7 C14F11.7 883.28 7108.51
6. F25E5.10 try-8 792.98 6381.79 TRYpsin-like protease [Source:RefSeq peptide;Acc:NP_504916]
7. F26D10.13 F26D10.13 764.77 6154.75
8. RIT3M.828 742.67 5976.95
9. T02H6.9 T02H6.9 735.54 5919.50
10. Y51H4A.10 fip-7 722.73 5816.47 Fungus-Induced Protein [Source:RefSeq peptide;Acc:NP_502967]
11. Y51H4A.26 fipr-28 687.50 5532.89 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_502968]
12. K12H6.8 K12H6.8 652.83 5253.88
13. F09C6.10 F09C6.10 635.15 5111.63
14. T27E9.1 ant-1.1 627.90 5053.28 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
15. T04C12.6 act-1 616.46 4961.19 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
16. F18E9.7 F18E9.7 605.70 4874.56
17. K12H6.4 K12H6.4 576.58 4640.23
18. Y39B6A.1 Y39B6A.1 566.27 4557.25
19. T28D6.2 tba-7 561.28 4517.13 TuBulin, Alpha [Source:RefSeq peptide;Acc:NP_499463]
20. RIT1P.688 522.31 4203.47
21. Y110A2AL.7 Y110A2AL.7 511.66 4117.76
22. Y51H4A.32 fipr-27 508.03 4088.58 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_001076736]
23. E04A4.7 cyc-2.1 476.20 3832.36 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
24. F46B6.13 F46B6.13 469.62 3779.47
25. C16C8.19 C16C8.19 440.96 3548.78
26. F26F12.1 col-140 434.27 3494.99 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
27. C47B2.5 eif-6 419.23 3373.90 Eukaryotic translation initiation factor 6 [Source:UniProtKB/Swiss-Prot;Acc:O62106]
28. F37C12.4 rpl-36 416.94 3355.48 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
29. T26A8.3 T26A8.3 407.08 3276.15
30. C16C8.9 C16C8.9 404.70 3257.00
31. F26D2.16 F26D2.16 394.62 3175.85
32. F07A5.7 unc-15 390.43 3142.11 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
33. F54E7.2 rps-12 390.43 3142.11 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
34. K04H8.3 K04H8.3 385.22 3100.17
35. F37C12.9 rps-14 381.70 3071.90 40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150]
36. T04C12.4 act-3 381.59 3070.99 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
37. Y82E9BR.3 Y82E9BR.3 375.47 3021.75 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
38. C34F6.2 col-178 374.91 3017.20 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
39. F31E3.5 eef-1A.1 369.69 2975.25 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
40. T26E3.6 T26E3.6 369.51 2973.79
41. F11H8.3 col-8 364.48 2933.31 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
42. F11G11.11 col-20 363.92 2928.75 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
43. F39B2.6 rps-26 361.99 2913.25 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
44. K02F2.2 ahcy-1 357.80 2879.51 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
45. K02B2.5 rps-25 353.49 2844.86 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
46. C34E10.6 atp-2 351.11 2825.71 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
47. W09C5.6 rpl-31 345.90 2783.77 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
48. F07A11.2 gfat-1 342.16 2753.68 Glutamine-Fructose 6-phosphate AminoTransferase homolog [Source:RefSeq peptide;Acc:NP_496479]
49. K08D12.6 K08D12.6 341.94 2751.86
50. F57B1.4 col-160 341.26 2746.39 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
51. Y49F6B.6 Y49F6B.6 341.26 2746.39
52. RIT2M.1695 338.99 2728.15
53. C42C1.14 rpl-34 333.55 2684.38 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
54. F36A2.6 rps-15 330.04 2656.12 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
55. B0041.4 rpl-4 329.70 2653.38 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
56. T05A1.2 col-122 329.25 2649.73 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
57. Y24D9A.4 rpl-7A 326.19 2625.12 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
58. RIT4P.833 312.37 2513.87
59. Y71A12B.1 rps-6 312.37 2513.87 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
60. F11C3.3 unc-54 309.19 2488.34 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
61. C06B8.8 rpl-38 308.85 2485.61 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
62. ZK1193.1 col-19 308.63 2483.78 Cuticle collagen 19 [Source:UniProtKB/Swiss-Prot;Acc:P18835]
63. F25H2.5 ndk-1 303.87 2445.49 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
64. C24F3.6 col-124 296.39 2385.31 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
65. F56E10.4 rps-27 290.84 2340.63 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
66. D1007.6 rps-10 285.97 2301.42 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
67. M03F4.2 act-4 285.06 2294.13 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
68. C53B4.5 col-119 284.61 2290.48 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
69. F40F11.1 rps-11 279.85 2252.18 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
70. B0513.3 rpl-29 278.26 2239.42 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
71. F26D10.3 hsp-1 276.68 2226.65 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
72. R13H9.4 msp-53 272.82 2195.65 Major sperm protein 19/31/40/45/50/51/53/59/61/65/81/113/142 [Source:UniProtKB/Swiss-Prot;Acc:P53017]
73. F28H1.2 cpn-3 271.35 2183.80 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
74. C04F12.4 rpl-14 270.78 2179.24 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
75. ZK721.2 unc-27 261.15 2101.73 Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1]
76. Y38A10A.5 crt-1 259.11 2085.32 Calreticulin [Source:UniProtKB/Swiss-Prot;Acc:P27798]
77. F42C5.8 rps-8 257.64 2073.47 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
78. RIT4P.255 257.26 2070.37
79. R05G6.7 vdac-1 257.08 2068.91 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
80. C06A8.3 C06A8.3 253.79 2042.47
81. Y71F9AL.13 rpl-1 253.68 2041.55 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
82. T25F10.6 clik-1 252.88 2035.17 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
83. Y105E8B.1 lev-11 252.09 2028.79 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
84. C14B9.7 rpl-21 246.20 1981.37 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
85. C36E6.3 mlc-1 245.41 1974.99 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
86. Y105E8A.16 rps-20 244.39 1966.79 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
87. F14D2.7 F14D2.7 243.62 1960.58
88. F08B6.4 unc-87 241.33 1942.17 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
89. T15B7.3 col-143 240.19 1933.05 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
90. F13B10.2 rpl-3 237.93 1914.81 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
91. Y106G6H.2 pab-1 236.68 1904.78 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
92. R13A5.8 rpl-9 233.40 1878.34 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
93. F54C9.5 rpl-5 231.36 1861.93 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
94. C49H3.11 rps-2 230.79 1857.37 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
95. F28D1.7 rps-23 229.09 1843.69 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
96. F09F7.2 mlc-3 228.86 1841.87 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
97. ZC434.2 rps-7 228.30 1837.31 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
98. F40F8.10 rps-9 227.62 1831.84 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
99. R13H9.2 msp-57 221.73 1784.42 Major sperm protein 55/57 [Source:UniProtKB/Swiss-Prot;Acc:Q17856]
100. C26F1.9 rpl-39 220.48 1774.39 60S ribosomal protein L39 [Source:UniProtKB/Swiss-Prot;Acc:P52814]
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA