C. elegans Tomo-Seq Search Original sections Merged regions Download

Data search


search
Exact
Search

Experiment male1, region R2.

Sample reads: 272,692. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. T27E9.1 ant-1.1 2695.38 9885.35 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
2. C06A8.3 C06A8.3 2651.19 9723.30
3. M03F4.2 act-4 2378.14 8721.88 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
4. F02A9.3 far-2 2042.78 7491.93 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
5. K08D12.6 K08D12.6 1946.48 7138.73
6. Y82E9BR.3 Y82E9BR.3 1830.91 6714.89 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
7. F46H5.3 F46H5.3 1821.85 6681.65 Probable arginine kinase F46H5.3 [Source:UniProtKB/Swiss-Prot;Acc:Q10454]
8. C36E6.3 mlc-1 1796.92 6590.24 Myosin regulatory light chain 1 [Source:UniProtKB/Swiss-Prot;Acc:P19625]
9. F09F7.2 mlc-3 1752.73 6428.18 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
10. T04C12.6 act-1 1663.23 6099.92 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
11. Y105E8B.1 lev-11 1598.65 5863.07 Tropomyosin isoforms a/b/d/f [Source:UniProtKB/Swiss-Prot;Acc:Q22866]
12. F11C3.3 unc-54 1539.73 5646.99 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
13. T04C12.4 act-3 1399.24 5131.74 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
14. F07A5.7 unc-15 1396.98 5123.43 Paramyosin [Source:UniProtKB/Swiss-Prot;Acc:P10567]
15. C14B9.1 hsp-12.2 1327.86 4869.96 Heat shock protein Hsp-12.2 [Source:UniProtKB/Swiss-Prot;Acc:P34328]
16. C34E10.6 atp-2 1296.14 4753.61 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
17. T05A1.2 col-122 1221.36 4479.37 COLlagen [Source:RefSeq peptide;Acc:NP_501700]
18. K10B3.9 mai-1 1145.45 4200.96 ATPase inhibitor mai-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P37209]
19. F28H1.2 cpn-3 1053.68 3864.39 CalPoNin [Source:RefSeq peptide;Acc:NP_491282]
20. R05G6.7 vdac-1 1053.68 3864.39 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
21. F11H8.3 col-8 1009.49 3702.33 Cuticle collagen 8 [Source:UniProtKB/Swiss-Prot;Acc:P18833]
22. W03F8.1 tni-4 1004.96 3685.71 Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572]
23. F26F12.1 col-140 997.03 3656.63 COLlagen [Source:RefSeq peptide;Acc:NP_504525]
24. C36E6.5 mlc-2 986.83 3619.23 Myosin regulatory light chain 2 [Source:UniProtKB/Swiss-Prot;Acc:P19626]
25. F49D11.8 cpn-4 981.17 3598.45 CalPoNin [Source:RefSeq peptide;Acc:NP_492849]
26. T25F10.6 clik-1 919.99 3374.07 CaLponIn-liKe proteins [Source:RefSeq peptide;Acc:NP_001024158]
27. F01G4.6 F01G4.6 912.06 3344.98 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
28. F52H3.7 lec-2 910.92 3340.83 gaLECtin [Source:RefSeq peptide;Acc:NP_496165]
29. F54C1.7 pat-10 909.79 3336.67 Paralysed Arrest at Two-fold [Source:RefSeq peptide;Acc:NP_491501]
30. Y73B6BL.24 acp-6 895.06 3282.65 ACid Phosphatase family [Source:RefSeq peptide;Acc:NP_500982]
31. K02F2.2 ahcy-1 891.66 3270.19 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
32. H28O16.1 H28O16.1 890.53 3266.03 ATP synthase subunit alpha, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9XXK1]
33. Y69A2AR.18 Y69A2AR.18 890.53 3266.03
34. F02A9.2 far-1 886.00 3249.41 Fatty-acid and retinol-binding protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P34382]
35. C34F6.2 col-178 881.47 3232.79 COLlagen [Source:RefSeq peptide;Acc:NP_509869]
36. K12G11.3 sodh-1 866.74 3178.77 Alcohol dehydrogenase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q17334]
37. C24F3.6 col-124 857.67 3145.53 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
38. R06C7.10 myo-1 847.48 3108.13 Myosin-1 [Source:UniProtKB/Swiss-Prot;Acc:P02567]
39. R53.4 R53.4 824.82 3025.03 Putative ATP synthase subunit f, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q22021]
40. Y79H2A.1 brp-1 816.89 2995.94 Bypass of Response to Pheromone in yeast [Source:RefSeq peptide;Acc:NP_001022952]
41. T20G5.2 cts-1 808.95 2966.85 Probable citrate synthase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P34575]
42. F26E4.6 F26E4.6 780.63 2862.97
43. T18D3.4 myo-2 778.36 2854.66 Myosin-2 [Source:UniProtKB/Swiss-Prot;Acc:P12845]
44. T21B10.2 enol-1 772.70 2833.88 Enolase [Source:UniProtKB/Swiss-Prot;Acc:Q27527]
45. F20H11.3 mdh-2 771.57 2829.73 Probable malate dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O02640]
46. W09C5.8 W09C5.8 765.90 2808.95
47. F11G11.11 col-20 764.77 2804.80 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
48. T05D4.1 aldo-1 756.84 2775.71 Fructose-bisphosphate aldolase 1 [Source:UniProtKB/Swiss-Prot;Acc:P54216]
49. Y77E11A.15 col-106 748.91 2746.62 COLlagen [Source:RefSeq peptide;Acc:NP_741318]
50. C53B4.5 col-119 727.38 2667.67 COLlagen [Source:RefSeq peptide;Acc:NP_501561]
51. E04A4.7 cyc-2.1 714.92 2621.97 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
52. F08B6.4 unc-87 686.59 2518.09 Unc-87 protein [Source:UniProtKB/TrEMBL;Acc:Q6LD30]
53. W03G11.1 col-181 682.06 2501.46 COLlagen [Source:RefSeq peptide;Acc:NP_001041295]
54. F27C1.7 atp-3 677.53 2484.84 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
55. F32A5.4 F32A5.4 677.53 2484.84
56. F53A9.10 tnt-2 671.86 2464.07 TropoNin T [Source:RefSeq peptide;Acc:NP_001024703]
57. F25H2.5 ndk-1 669.60 2455.76 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
58. Y67H2A.5 Y67H2A.5 668.46 2451.60
59. Y37D8A.14 cco-2 659.40 2418.36 Cytochrome c oxidase subunit 5A, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P55954]
60. F52D10.3 ftt-2 615.21 2256.30 14-3-3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20655]
61. Y71H2AM.5 Y71H2AM.5 593.69 2177.35
62. T20B3.2 tni-3 576.69 2115.03 Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9]
63. F42G8.12 isp-1 564.23 2069.32 Cytochrome b-c1 complex subunit Rieske, mitochondrial [Source:RefSeq peptide;Acc:NP_501361]
64. C06H2.1 atp-5 559.70 2052.70 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_505829]
65. ZC15.8 pqn-94 558.56 2048.54 Prion-like-(Q/N-rich)-domain-bearing protein [Source:RefSeq peptide;Acc:NP_507911]
66. C45B2.1 C45B2.1 552.90 2027.76
67. F47B7.1 F47B7.1 550.63 2019.45 UPF0057 membrane protein F47B7.1 [Source:UniProtKB/Swiss-Prot;Acc:Q20516]
68. RIT6P.22 547.23 2006.99
69. C53C9.2 C53C9.2 535.90 1965.44
70. F29B9.11 F29B9.11 535.90 1965.44
71. F11E6.3 F11E6.3 522.31 1915.57
72. F14F7.1 col-98 517.78 1898.95 COLlagen [Source:RefSeq peptide;Acc:NP_499703]
73. F29C4.2 F29C4.2 514.38 1886.49
74. F25H5.3 pyk-1 513.24 1882.33 Pyruvate kinase [Source:RefSeq peptide;Acc:NP_492459]
75. F57B1.4 col-160 512.11 1878.18 COLlagen [Source:RefSeq peptide;Acc:NP_506284]
76. F26D10.3 hsp-1 487.19 1786.76 Heat shock 70 kDa protein A [Source:UniProtKB/Swiss-Prot;Acc:P09446]
77. F15A2.1 col-184 480.39 1761.83 COLlagen [Source:RefSeq peptide;Acc:NP_001257223]
78. F13D12.4 alh-8 478.12 1753.52 Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P52713]
79. T15B7.3 col-143 464.53 1703.65 COLlagen [Source:RefSeq peptide;Acc:NP_504738]
80. F44E5.1 F44E5.1 453.20 1662.10
81. R02F2.1 R02F2.1 453.20 1662.10
82. F23H12.9 fipr-2 448.66 1645.48 FIP (Fungus-Induced Protein) Related [Source:RefSeq peptide;Acc:NP_872150]
83. F11C7.5 osm-11 446.40 1637.17
84. C18A11.7 dim-1 438.47 1608.08 Disorganized muscle protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q18066]
85. T28D6.3 T28D6.3 432.80 1587.31
86. C32D5.9 lgg-1 429.40 1574.84
87. F42A8.2 sdhb-1 428.27 1570.69 Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q09545]
88. C53A5.1 ril-1 427.14 1566.53 RNAi-Induced Longevity [Source:RefSeq peptide;Acc:NP_506598]
89. T02H6.11 T02H6.11 422.60 1549.91
90. F33A8.3 cey-1 421.47 1545.76 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_496366]
91. T05H4.13 alh-4 419.21 1537.44 Aldehyde dehydrogenase [Source:RefSeq peptide;Acc:NP_741553]
92. C44B12.2 ost-1 418.07 1533.29 SPARC [Source:UniProtKB/Swiss-Prot;Acc:P34714]
93. W06H8.8 ttn-1 416.94 1529.13 TiTiN family [Source:RefSeq peptide;Acc:NP_001024198]
94. R10E11.8 vha-1 410.14 1504.20 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
95. K11D9.2 sca-1 409.01 1500.05 Calcium-transporting ATPase [Source:RefSeq peptide;Acc:NP_499386]
96. C34F6.3 col-179 405.61 1487.58 COLlagen [Source:RefSeq peptide;Acc:NP_509870]
97. Y5F2A.1 ttr-16 399.95 1466.81 Transthyretin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:P55955]
98. Y75B12B.2 cyn-7 398.81 1462.65 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
99. M7.1 let-70 396.55 1454.34 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
100. F37C4.6 F37C4.6 380.68 1396.17
First Previous 1 2 3 Next Last
Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
Korswagen Lab - 2018 © Hubrecht Institute | Berezikov Lab - 2018 © ERIBA