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Experiment herm3, region R9.

Sample reads: 1,430,789. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 7393.75 5167.60 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. C49H3.11 rps-2 7303.76 5104.71 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
3. F31E3.5 eef-1A.1 7303.76 5104.71 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
4. C04F12.4 rpl-14 7234.94 5056.61 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
5. F10B5.1 rpl-10 6562.62 4586.71 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
6. F57F4.4 F57F4.4 4129.21 2885.97
7. F13B10.2 rpl-3 3966.86 2772.50 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
8. F56E10.4 rps-27 3924.51 2742.90 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
9. R05G6.7 vdac-1 3924.51 2742.90 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
10. Y82E9BR.3 Y82E9BR.3 3649.23 2550.50 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
11. F42C5.8 rps-8 3635.11 2540.64 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
12. E04A4.7 cyc-2.1 3573.35 2497.47 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
13. T27E9.1 ant-1.1 3573.35 2497.47 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
14. R13A5.8 rpl-9 3568.06 2493.77 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
15. B0041.4 rpl-4 3531.00 2467.87 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
16. RIT1P.688 3499.24 2445.67
17. F40F11.1 rps-11 3472.77 2427.17 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
18. F36A2.6 rps-15 3432.18 2398.80 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
19. Y105E8A.16 rps-20 3430.42 2397.57 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
20. W09C5.6 rpl-31 3322.78 2322.34 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
21. Y24D9A.4 rpl-7A 3322.78 2322.34 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
22. Y71A12B.1 rps-6 3218.66 2249.57 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
23. T04C12.4 act-3 3213.37 2245.87 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
24. F25H2.5 ndk-1 3119.85 2180.51 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
25. D1054.11 D1054.11 3059.85 2138.57
26. Y71F9AL.13 rpl-1 3059.85 2138.57 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
27. ZC434.2 rps-7 3005.14 2100.34 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
28. C42C1.14 rpl-34 2957.50 2067.04 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
29. K08D12.6 K08D12.6 2957.50 2067.04
30. F52B5.6 rpl-25.2 2931.03 2048.54 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
31. K02F2.2 ahcy-1 2931.03 2048.54 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
32. F02A9.3 far-2 2902.80 2028.81 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
33. D1007.6 rps-10 2885.15 2016.48 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
34. F59D8.2 vit-4 2867.51 2004.14 Vitellogenin-4 [Source:UniProtKB/Swiss-Prot;Acc:P18947]
35. C56C10.8 icd-1 2819.86 1970.84 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
36. T04C12.6 act-1 2788.10 1948.64 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
37. T22F3.4 rpl-11.1 2705.16 1890.68 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
38. C14B9.7 rpl-21 2671.63 1867.24 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
39. F39B2.6 rps-26 2671.63 1867.24 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
40. F54C9.5 rpl-5 2657.52 1857.38 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
41. F27C1.7 atp-3 2653.99 1854.91 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
42. Y18D10A.17 car-1 2625.75 1835.18 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
43. F55B11.2 F55B11.2 2622.22 1832.71
44. M03F4.2 act-4 2615.16 1827.78 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
45. F28C6.7 rpl-26 2604.58 1820.38 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
46. Y69A2AR.18 Y69A2AR.18 2576.34 1800.64
47. W08E12.7 W08E12.7 2546.34 1779.68
48. C42D8.2 vit-2 2505.76 1751.31 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
49. T07A9.14 T07A9.14 2498.70 1746.38
50. C34E10.6 atp-2 2489.88 1740.21 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
51. K02B2.5 rps-25 2472.23 1727.88 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
52. K11H12.2 rpl-15 2428.11 1697.05 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
53. R10E11.8 vha-1 2398.12 1676.08 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
54. Y48B6A.2 rpl-43 2376.94 1661.28 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
55. B0250.1 rpl-2 2368.12 1655.11 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
56. Y62H9A.6 Y62H9A.6 2366.35 1653.88
57. C08H9.2 vgln-1 2345.18 1639.08 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
58. K08D12.3 K08D12.3 2345.18 1639.08
59. Y22D7AL.10 Y22D7AL.10 2345.18 1639.08
60. F37C12.4 rpl-36 2320.47 1621.81 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
61. F01G4.6 F01G4.6 2308.12 1613.18 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
62. F57B9.5 byn-1 2292.24 1602.08 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
63. F40F8.10 rps-9 2286.95 1598.38 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
64. Y75B12B.2 cyn-7 2278.12 1592.21 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
65. D2096.8 nap-1 2265.77 1583.58 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
66. Y18D10A.19 fkb-2 2264.01 1582.35 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
67. Y48B6A.14 hmg-1.1 2225.18 1555.21 HMG [Source:RefSeq peptide;Acc:NP_496970]
68. K07H8.10 K07H8.10 2221.65 1552.75
69. B0513.3 rpl-29 2212.83 1546.58 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
70. F09F7.2 mlc-3 2204.01 1540.41 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
71. C09H10.2 rpl-41 2200.48 1537.95 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
72. ZK813.7 ZK813.7 2172.24 1518.21
73. Y57G11C.15 sec-61 2163.42 1512.05 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
74. C17F4.7 C17F4.7 2154.60 1505.88
75. C06B8.8 rpl-38 2147.54 1500.95 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
76. F28D1.7 rps-23 2147.54 1500.95 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
77. M01F1.2 rpl-16 2106.95 1472.58 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
78. F53A3.3 rps-22 2105.19 1471.35 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
79. F11C3.3 unc-54 2094.60 1463.95 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
80. K07H8.6 vit-6 2082.25 1455.32 Vitellogenin-6 [Source:UniProtKB/Swiss-Prot;Acc:P18948]
81. F46F11.2 cey-2 2075.19 1450.38 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
82. Y45F10D.12 rpl-18 2045.19 1429.42 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
83. Y37D8A.19 Y37D8A.19 2032.84 1420.78
84. T04C12.5 act-2 2013.43 1407.22 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
85. R151.3 rpl-6 2011.67 1405.98 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
86. C49F5.1 sams-1 2009.90 1404.75 Probable S-adenosylmethionine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:O17680]
87. ZC395.10 ZC395.10 1990.49 1391.18 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
88. F53G12.10 rpl-7 1990.49 1391.18 60S ribosomal protein L7 [Source:UniProtKB/Swiss-Prot;Acc:O01802]
89. T01C3.6 rps-16 1976.37 1381.32 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
90. C07H6.5 cgh-1 1958.73 1368.98 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
91. T05F1.3 rps-19 1942.85 1357.88 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
92. Y57G11C.16 rps-18 1941.08 1356.65 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502794]
93. F55D10.2 rpl-25.1 1921.67 1343.08 60S ribosomal protein L23a 1 [Source:UniProtKB/Swiss-Prot;Acc:P48162]
94. Y67H2A.5 Y67H2A.5 1904.02 1330.75
95. R09B3.3 R09B3.3 1881.08 1314.72
96. C24F3.6 col-124 1877.55 1312.25 COLlagen [Source:RefSeq peptide;Acc:NP_501867]
97. F11G11.11 col-20 1861.67 1301.15 COLlagen [Source:RefSeq peptide;Acc:NP_494879]
98. F21F8.7 asp-6 1859.91 1299.92 Aspartic protease 6 [Source:UniProtKB/Swiss-Prot;Acc:O01530]
99. Y56A3A.21 trap-4 1842.26 1287.58 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
100. Y38H6C.1 dct-16 1815.79 1269.08 DAF-16/FOXO Controlled, germline Tumor affecting [Source:RefSeq peptide;Acc:NP_001256923]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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