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Experiment herm3, region R11.

Sample reads: 4,367,530. Showing entries 1-100.

No. Gene ID Gene Name Counts CPM Annotation
1. F54E7.2 rps-12 15978.62 3658.50 40S ribosomal protein S12 [Source:UniProtKB/Swiss-Prot;Acc:P49196]
2. F31E3.5 eef-1A.1 13991.66 3203.56 Elongation factor 1-alpha [Source:UniProtKB/Swiss-Prot;Acc:P53013]
3. C04F12.4 rpl-14 13458.75 3081.55 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_492576]
4. C49H3.11 rps-2 13220.52 3027.00 40S ribosomal protein S2 [Source:UniProtKB/Swiss-Prot;Acc:P51403]
5. F10B5.1 rpl-10 10912.40 2498.53 60S ribosomal protein L10 [Source:UniProtKB/Swiss-Prot;Acc:Q09533]
6. T27E9.1 ant-1.1 9927.74 2273.08 Adenine Nucleotide Translocator [Source:RefSeq peptide;Acc:NP_001022799]
7. F42C5.8 rps-8 9440.71 2161.57 40S ribosomal protein S8 [Source:UniProtKB/Swiss-Prot;Acc:P48156]
8. Y24D9A.4 rpl-7A 9218.37 2110.66 60S ribosomal protein L7a [Source:UniProtKB/Swiss-Prot;Acc:Q966C6]
9. F13B10.2 rpl-3 9209.54 2108.64 60S ribosomal protein L3 [Source:UniProtKB/Swiss-Prot;Acc:P50880]
10. R05G6.7 vdac-1 9200.72 2106.62 Probable voltage-dependent anion-selective channel [Source:UniProtKB/Swiss-Prot;Acc:Q21752]
11. RIT1P.688 8994.26 2059.35
12. E04A4.7 cyc-2.1 8630.75 1976.12 Cytochrome c 2.1 [Source:UniProtKB/Swiss-Prot;Acc:P19974]
13. F56E10.4 rps-27 8392.53 1921.57 40S ribosomal protein S27 [Source:UniProtKB/Swiss-Prot;Acc:Q9TXP0]
14. Y18D10A.17 car-1 8380.17 1918.74 Cytokinesis, Apoptosis, RNA-associated [Source:RefSeq peptide;Acc:NP_493254]
15. F40F11.1 rps-11 8337.82 1909.05 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_502186]
16. B0041.4 rpl-4 8313.12 1903.39 60S ribosomal protein L4 [Source:UniProtKB/Swiss-Prot;Acc:O02056]
17. Y82E9BR.3 Y82E9BR.3 8242.53 1887.23 ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0]
18. R13A5.8 rpl-9 8156.07 1867.43 60S ribosomal protein L9 [Source:UniProtKB/Swiss-Prot;Acc:Q95Y90]
19. F36A2.6 rps-15 8136.66 1862.99 40S ribosomal protein S15 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVP0]
20. W09C5.6 rpl-31 8023.72 1837.13 60S ribosomal protein L31 [Source:UniProtKB/Swiss-Prot;Acc:Q9U332]
21. Y105E8A.16 rps-20 8009.60 1833.90 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_740944]
22. Y71F9AL.13 rpl-1 7852.55 1797.94 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q9N4I4]
23. T04C12.4 act-3 7771.38 1779.35 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
24. Y48B6A.14 hmg-1.1 7630.21 1747.03 HMG [Source:RefSeq peptide;Acc:NP_496970]
25. D1007.6 rps-10 7443.16 1704.20 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_491398]
26. F25H2.5 ndk-1 7367.28 1686.83 Nucleoside diphosphate kinase [Source:RefSeq peptide;Acc:NP_492761]
27. ZC434.2 rps-7 7358.46 1684.81 40S ribosomal protein S7 [Source:UniProtKB/Swiss-Prot;Acc:Q23312]
28. Y71A12B.1 rps-6 7291.40 1669.46 40S ribosomal protein S6 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEN6]
29. T04C12.6 act-1 7289.64 1669.05 Actin-1 [Source:UniProtKB/Swiss-Prot;Acc:P0DM41]
30. H02I12.1 cbd-1 7229.64 1655.32 Chitin-Binding Domain protein [Source:RefSeq peptide;Acc:NP_502145]
31. F43D9.4 sip-1 7000.24 1602.79 Stress-induced protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q20363]
32. F52B5.6 rpl-25.2 6991.42 1600.77 60S ribosomal protein L23a 2 [Source:UniProtKB/Swiss-Prot;Acc:Q20647]
33. F46F11.2 cey-2 6852.01 1568.85 C. Elegans Y-box [Source:RefSeq peptide;Acc:NP_491645]
34. B0280.5 cpg-2 6759.37 1547.64 Chondroitin proteoglycan-2 [Source:UniProtKB/Swiss-Prot;Acc:P41996]
35. C56C10.8 icd-1 6749.67 1545.42 Transcription factor BTF3 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18885]
36. C07H6.5 cgh-1 6735.55 1542.19 ATP-dependent RNA helicase cgh-1 [Source:UniProtKB/Swiss-Prot;Acc:Q95YF3]
37. F02A9.3 far-2 6719.67 1538.55 Fatty-acid and retinol-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:P34383]
38. C42C1.14 rpl-34 6686.14 1530.87 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_502330]
39. Y69A2AR.18 Y69A2AR.18 6613.79 1514.31
40. T22F3.4 rpl-11.1 6612.03 1513.90 60S ribosomal protein L11 [Source:UniProtKB/Swiss-Prot;Acc:Q94300]
41. ZC404.8 spn-4 6488.50 1485.62 PIP-1; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:G5EF02]
42. F57F4.4 F57F4.4 6408.74 1467.36
43. C14B9.7 rpl-21 6340.27 1451.68 60S ribosomal protein L21 [Source:UniProtKB/Swiss-Prot;Acc:P34334]
44. F39B2.6 rps-26 6306.75 1444.01 40S ribosomal protein S26 [Source:UniProtKB/Swiss-Prot;Acc:O45499]
45. F54C9.5 rpl-5 6184.99 1416.13 60S ribosomal protein L5 [Source:UniProtKB/Swiss-Prot;Acc:P49405]
46. T07A9.14 T07A9.14 6116.17 1400.37
47. T06E6.2 cyb-3 6087.93 1393.91 G2/mitotic-specific cyclin-B3 [Source:UniProtKB/Swiss-Prot;Acc:Q10654]
48. K02F2.2 ahcy-1 6038.52 1382.59 Adenosylhomocysteinase [Source:UniProtKB/Swiss-Prot;Acc:P27604]
49. F28C6.7 rpl-26 6036.76 1382.19 60S ribosomal protein L26 [Source:UniProtKB/Swiss-Prot;Acc:Q19869]
50. W08E12.7 W08E12.7 6036.76 1382.19
51. K02B2.5 rps-25 6031.47 1380.98 40S ribosomal protein S25 [Source:UniProtKB/Swiss-Prot;Acc:P52821]
52. K08D12.3 K08D12.3 6020.88 1378.55
53. F27C1.7 atp-3 5999.70 1373.71 ATP synthase subunit [Source:RefSeq peptide;Acc:NP_001021420]
54. C34E10.6 atp-2 5967.94 1366.43 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P46561]
55. T04C12.5 act-2 5948.53 1361.99 Actin-2 [Source:UniProtKB/Swiss-Prot;Acc:P10984]
56. Y75B12B.2 cyn-7 5945.00 1361.18 Peptidyl-prolyl cis-trans isomerase 7 [Source:UniProtKB/Swiss-Prot;Acc:P52015]
57. F11C3.3 unc-54 5892.06 1349.06 Myosin-4 [Source:UniProtKB/Swiss-Prot;Acc:P02566]
58. Y48B6A.2 rpl-43 5821.48 1332.90 60S ribosomal protein L37a [Source:UniProtKB/Swiss-Prot;Acc:Q9U2A8]
59. Y57G11C.15 sec-61 5749.13 1316.33 yeast SEC homolog [Source:RefSeq peptide;Acc:NP_001255838]
60. M7.1 let-70 5676.78 1299.77 Ubiquitin-conjugating enzyme E2 2 [Source:UniProtKB/Swiss-Prot;Acc:P35129]
61. M03F4.2 act-4 5675.01 1299.36 Actin-4 [Source:UniProtKB/Swiss-Prot;Acc:P10986]
62. C08H9.2 vgln-1 5657.37 1295.32 ViGiLN homolog [Source:RefSeq peptide;Acc:NP_496136]
63. R10E11.8 vha-1 5650.31 1293.71 V-type proton ATPase 16 kDa proteolipid subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:Q21898]
64. F01G4.6 F01G4.6 5627.37 1288.46 Phosphate carrier protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P40614]
65. B0513.3 rpl-29 5588.55 1279.57 Ribosomal Protein, Large subunit [Source:RefSeq peptide;Acc:NP_001255763]
66. T01C3.6 rps-16 5553.25 1271.49 40S ribosomal protein S16 [Source:UniProtKB/Swiss-Prot;Acc:Q22054]
67. K11H12.2 rpl-15 5517.96 1263.41 60S ribosomal protein L15 [Source:UniProtKB/Swiss-Prot;Acc:P91374]
68. D2096.8 nap-1 5491.49 1257.35 Nucleosome Assembly Protein [Source:RefSeq peptide;Acc:NP_501422]
69. F57B9.5 byn-1 5461.49 1250.48 Cell adhesion protein byn-1 [Source:UniProtKB/Swiss-Prot;Acc:Q20932]
70. F54C9.8 puf-5 5448.44 1247.49 Pumilio domain-containing protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q20757]
71. K07H8.10 K07H8.10 5410.32 1238.76
72. F52E1.1 pos-1 5409.26 1238.52 POsterior Segregation [Source:RefSeq peptide;Acc:NP_505172]
73. C44B12.5 perm-4 5375.73 1230.84 PERMeable eggshell [Source:RefSeq peptide;Acc:NP_500041]
74. ZC395.10 ZC395.10 5320.32 1218.15 Co-chaperone protein daf-41 [Source:UniProtKB/Swiss-Prot;Acc:Q23280]
75. F40F8.10 rps-9 5276.21 1208.05 40S ribosomal protein S9 [Source:UniProtKB/Swiss-Prot;Acc:Q20228]
76. B0250.1 rpl-2 5253.27 1202.80 60S ribosomal protein L8 [Source:UniProtKB/Swiss-Prot;Acc:Q9XVF7]
77. W02A2.7 mex-5 5235.62 1198.76 Zinc finger protein mex-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUB2]
78. K08D12.6 K08D12.6 5223.27 1195.93
79. Y45F10D.12 rpl-18 5203.86 1191.49 60S ribosomal protein L18 [Source:UniProtKB/Swiss-Prot;Acc:O45946]
80. C09H10.2 rpl-41 5193.27 1189.06 60S ribosomal protein L44 [Source:UniProtKB/Swiss-Prot;Acc:P48166]
81. F53A3.3 rps-22 5170.33 1183.81 Ribosomal Protein, Small subunit [Source:RefSeq peptide;Acc:NP_497481]
82. M01F1.2 rpl-16 5161.51 1181.79 60S ribosomal protein L13a [Source:UniProtKB/Swiss-Prot;Acc:Q27389]
83. F37C12.4 rpl-36 5140.33 1176.94 60S ribosomal protein L36 [Source:UniProtKB/Swiss-Prot;Acc:P49181]
84. Y111B2A.18 rsp-3 5018.57 1149.06 Probable splicing factor, arginine/serine-rich 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9NEW6]
85. Y18D10A.19 fkb-2 4962.11 1136.14 Peptidyl-prolyl cis-trans isomerase [Source:RefSeq peptide;Acc:NP_001021722]
86. F28D1.7 rps-23 4947.99 1132.90 40S ribosomal protein S23 [Source:UniProtKB/Swiss-Prot;Acc:Q19877]
87. R151.3 rpl-6 4872.11 1115.53 60S ribosomal protein L6 [Source:UniProtKB/Swiss-Prot;Acc:P47991]
88. C06B8.8 rpl-38 4856.23 1111.89 60S ribosomal protein L38 [Source:UniProtKB/Swiss-Prot;Acc:O17570]
89. Y56A3A.21 trap-4 4831.53 1106.24 TRanslocon-Associated Protein [Source:RefSeq peptide;Acc:NP_499554]
90. R08C7.3 htz-1 4826.23 1105.03 Histone H2A.V [Source:UniProtKB/Swiss-Prot;Acc:Q27511]
91. C06A1.1 cdc-48.1 4783.88 1095.33 Transitional endoplasmic reticulum ATPase homolog 1 [Source:UniProtKB/Swiss-Prot;Acc:P54811]
92. R09B3.3 R09B3.3 4780.35 1094.52
93. T05F1.3 rps-19 4778.59 1094.12 40S ribosomal protein S19 [Source:UniProtKB/Swiss-Prot;Acc:O18650]
94. T23G11.3 gld-1 4769.76 1092.10 Female germline-specific tumor suppressor gld-1 [Source:UniProtKB/Swiss-Prot;Acc:Q17339]
95. T19H12.2 T19H12.2 4736.24 1084.42 Acidic leucine-rich nuclear phosphoprotein 32-related protein 2 [Source:UniProtKB/Swiss-Prot;Acc:O01615]
96. F09F7.2 mlc-3 4692.12 1074.32 Myosin, essential light chain [Source:UniProtKB/Swiss-Prot;Acc:P53014]
97. C47E8.11 C47E8.11 4637.42 1061.79
98. C42D8.2 vit-2 4625.07 1058.97 Vitellogenin-2 [Source:UniProtKB/Swiss-Prot;Acc:P05690]
99. Y22D7AL.10 Y22D7AL.10 4573.89 1047.25
100. Y106G6H.2 pab-1 4485.66 1027.05 Polyadenylate-binding protein [Source:RefSeq peptide;Acc:NP_001021709]
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Ebbing A, Vertesy A, Betist M, Spanjaard B, Junker JP, Berezikov E, van Oudenaarden A, Korswagen HC. Spatially-resolved transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes. Submitted.
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